DR403278

Overview
NameDR403278
Unique NameDR403278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length702
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403278 vs. ExPASy Swiss-Prot
Match: GSTU6_ORYSJ (Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU6 PE=2 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 1.797e-53
Identity = 107/217 (49.31%), Postives = 142/217 (65.44%), Query Frame = 2
Query:   68 VKVLGFSPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAW---SSSGPSILPSDPYDRAVARFWAAYVDEK----WFSALRDIGSANGAEAKKAAXXXXXXXXXXXXDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAAVKDVMP-ETDKL 694
            +K+LG   SP+ +R R+ L +KS+ YE++EENLG KS+LLL SNPVHK +PVL+H  +PV ES +IV+Y+DE W   +   PS++PSDPY+RAVARFWAAYVD+K    W + L   GS    E + AA             AF +CSKGKPFFGG+ +GF+D+  G YLGW    +K+   +L+D  +TP L  W ERF A  A K V+P + DKL
Sbjct:    7 LKLLGVWSSPYAIRVRVVLNLKSLPYEYVEENLGDKSDLLLASNPVHKSVPVLLHAGRPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYERAVARFWAAYVDDKVRPAWLAIL--FGSKT-EEERAAAVAQAVAALETLEGAFGECSKGKPFFGGDGVGFVDVVLGGYLGWFTAIDKLIGRRLIDPARTPALAAWEERFRATDAAKGVVPDDADKL 220          
BLAST of DR403278 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.601e-44
Identity = 93/210 (44.29%), Postives = 132/210 (62.86%), Query Frame = 2
Query:   68 VKVLGFSPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSAL-RDIGSANGAEAKKAAXXXXXXXXXXXXDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAAVKDVMPETDKL 694
            VK+LG   SPFV R +IALK+K VEY+FLEENLG+KS+LLLK NPVHKK+PV +HN++P+ ESL+IVEY+DE W ++   ILPSDPY RA+ARFW+ ++D+K   A+ + + + +  E +K              +      K K FFGG + G +DIA      W+ + ++I  ++L    K P L KW++ F     V +V+P  D L
Sbjct:    8 VKLLGIVGSPFVCRVQIALKLKGVEYKFLEENLGNKSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNN--PILPSDPYQRALARFWSKFIDDKIVGAVSKSVFTVDEKEREKNVEETYEALQFLENEL-----KDKKFFGGEEFGLVDIAAVFIAFWIPIFQEIAGLQLFTSEKFPILYKWSQEFLNHPFVHEVLPPRDPL 210          
BLAST of DR403278 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.686e-43
Identity = 94/221 (42.53%), Postives = 125/221 (56.56%), Query Frame = 2
Query:   53 MAXXXVKVLGFSPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSALRDIGSANGAEAKKAAXXXXXXXXXXXXDAFVKCSK-------GKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAAVKDVMPETDKL 694
            MA   V +L F PS F MR RIAL  K ++YE+ EE+L +KS LLL+ NP+HKKIPVLIHN KP+CES+I VEY++E W    P++LPSDPYDRA ARFWA Y+D+K +   R + +  G E + A               F++C K        KP+FGG   GF+DIA   Y  W    E         E + P  + WA+R     +V   +P+  K+
Sbjct:    1 MANEEVILLDFWPSMFGMRLRIALAEKEIKYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKKLYDFGRKLWTTKGEEQEAAKKD------------FIECLKVLEGALGDKPYFGGESFGFVDIALIGYYSWFYAYETFGNFS--TEAECPKFVAWAKRCMQRESVAKSLPDQPKV 207          
BLAST of DR403278 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.093e-42
Identity = 92/221 (41.63%), Postives = 125/221 (56.56%), Query Frame = 2
Query:   53 MAXXXVKVLGFSPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSALRDIGSANGAEAKKAAXXXXXXXXXXXXDAFVKCSK-------GKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAAVKDVMPETDKL 694
            MA   V +L F PS F MR RIAL  K ++YE+ +E+L +KS LLL+ NP+HKKIPVLIHN KP+CES+I VEY++E W    PS+LPSDPYDRA ARFWA Y+D+K +   R + +  G E + A               F++C K        +P+FGG   GF+DIA   +  W    E         E + P  + WA+R     +V   +P+  K+
Sbjct:    1 MANEEVILLDFWPSMFGMRLRIALAEKEIKYEYKQEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDKKLYDFGRKLWATKGEEQEAAKKD------------FIECLKVLEGALGDRPYFGGESFGFVDIALIGFYSWFYAYETFGNFS--TEAECPKFVAWAKRCMQRESVAKSLPDQPKV 207          
BLAST of DR403278 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.477e-39
Identity = 90/209 (43.06%), Postives = 125/209 (59.81%), Query Frame = 2
Query:   68 VKVLGFSPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSALRDIGSANGAEAKKAAXXXXXXXXXXXXDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAAVKDVMPETDKL 694
            VK+LGF  SPF  R   ALKIK V+YE++EE+  +KS LLL+SNP+HKK+PVLIHN K + ES++I+EY+DE +   GPSILP DPYDRA+ARFWA ++D+K  + ++      G E +K              +      K K FF G++ GF DIA      WL V E+ + V L+   K P   KW   +   + +K+ +P  D+L
Sbjct:    4 VKLLGFWYSPFSRRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPIHKKVPVLIHNGKRIVESMVILEYIDETF--EGPSILPKDPYDRALARFWAKFLDDKVPAVVKTF-LRKGEEQEKDKEEVCEMLKVLDNEL-----KDKKFFVGDKFGFADIAANLVAFWLGVFEEASGVVLVTSEKFPNFCKWRGEYINCSQIKESLPPRDEL 204          
BLAST of DR403278 vs. ExPASy Swiss-Prot
Match: GSTX1_SOLTU (Probable glutathione S-transferase OS=Solanum tuberosum GN=PRP1 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.477e-39
Identity = 91/209 (43.54%), Postives = 124/209 (59.33%), Query Frame = 2
Query:   68 VKVLGFSPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSALRDIGSANGAEAKKAAXXXXXXXXXXXXDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAAVKDVMPETDKL 694
            VK+LG   SPF  R   ALKIK V+YEF+EE+L +KS LLL+SNP+HKKIPVLIHN K +CES++I+EY+DEA+   GPSILP DPYDRA+ARFWA YV++K  +  +   S  G E +KA             +      K K  F G++ GF DI       +L + E+++ + L    K P    W + +C     ++  P  D+L
Sbjct:    4 VKLLGLRYSPFSHRVEWALKIKGVKYEFIEEDLQNKSPLLLQSNPIHKKIPVLIHNGKCICESMVILEYIDEAF--EGPSILPKDPYDRALARFWAKYVEDKGAAVWKSFFS-KGEEQEKAKEEAYEMLKILDNE-----FKDKKCFVGDKFGFADIVANGAALYLGILEEVSGIVLATSEKFPNFCAWRDEYCTQN--EEYFPSRDEL 202          
BLAST of DR403278 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.291e-39
Identity = 90/209 (43.06%), Postives = 126/209 (60.29%), Query Frame = 2
Query:   68 VKVLGFSPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSALRDIGSANGAEAKKAAXXXXXXXXXXXXDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAAVKDVMPETDKL 694
            VK+LGF  SPF  R   ALK+K V+YE++EE+  +KS LLL+SNPVHKK+PVLIHN KP+ ES++I+EY+DE +   GPSILP DPYDRA+ARFW+ ++ +K  +A+ +     G E +K              +      K K FF G++ GF DIA      WL V E+   V L+   K P   +W + +   + VK+ +P  D+L
Sbjct:    4 VKLLGFWYSPFTHRVEWALKLKGVKYEYIEEDRDNKSSLLLQSNPVHKKVPVLIHNGKPIVESMVILEYIDETF--EGPSILPKDPYDRALARFWSKFLGDK-VAAVVNTFFRKGEEQEKGKEEVYEMLKVLDNEL-----KDKKFFVGDKFGFADIAANLVGFWLGVFEEGYGVVLVTSEKFPNFSRWRDEYINCSQVKESLPSRDEL 204          
BLAST of DR403278 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.613e-39
Identity = 92/209 (44.02%), Postives = 125/209 (59.81%), Query Frame = 2
Query:   68 VKVLGFSPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSALRDIGSANGAEAKKAAXXXXXXXXXXXXDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAAVKDVMPETDKL 694
            VK+LGF  SPF  R   ALKIK V+YE++EE+  +KS LLL+SNPV+KK+PVLIHN KP+ ES+II+EY+DE +   GPSILP DPYDRA+ARFWA ++D+K  +A+ +     G E +K              +      K K FF G++ GF DIA      WL V E+     L+   K P   KW + +   + V + +P  D+L
Sbjct:    4 VKLLGFWYSPFSHRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPVYKKVPVLIHNGKPIVESMIILEYIDETF--EGPSILPKDPYDRALARFWAKFLDDK-VAAVVNTFFRKGEEQEKGKEEVYEMLKVLDNEL-----KDKKFFAGDKFGFADIAANLVGFWLGVFEEGYGDVLVKSEKFPNFSKWRDEYINCSQVNESLPPRDEL 204          
BLAST of DR403278 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.331e-39
Identity = 87/214 (40.65%), Postives = 120/214 (56.07%), Query Frame = 2
Query:   53 MAXXXVKVLGFSPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSALRDIGSANGAEAKKAAXXXXXXXXXXXXDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAAVKDVMPETDKL 694
            M    V +L F PS F MR RIAL +K ++YE  EENL  KS LLL+ NPVHKKIP+LIHN K +CESL I+EY+DE W    P +LPSDPY+R+ ARFWA Y+D+K +S  R + S  G + ++A             +        K +FGG+ +GF+D+A   +  W    E      +  E + P L+ WA+      +V   +P   K+
Sbjct:    1 MESNNVVLLDFWPSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNSKAICESLNILEYIDEVWHDKCP-LLPSDPYERSQARFWADYIDKKIYSTGRRVWSGKGEDQEEAKKEFIEILKTLEGEL-----GNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSI--EAECPKLVVWAKTCMESESVSKSLPHPHKI 206          
BLAST of DR403278 vs. ExPASy Swiss-Prot
Match: GSTX2_MAIZE (Probable glutathione S-transferase BZ2 OS=Zea mays GN=BZ2 PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.383e-37
Identity = 88/220 (40.00%), Postives = 132/220 (60.00%), Query Frame = 2
Query:   68 VKVLGFSPSPFVMRARIALKIKSVEYEFLEENLG-SKSELLLKSNPVHKKIPVLIHND-KPVCESLIIVEYVDEAWSSSGPS-----ILPSDPYDRAVARFWAAYVDEKWFSALRDIGSANGAEAKKAAXXXXXXXXXXXXDAFVKCSKGKPFFGGNQI--GFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAAVKDVMPETDKLAK 700
            ++VLG   SPF  RAR+AL ++ V YE L+E LG  KS+ LL +NPV+ KIPVL+  D + +CES +IV+Y+++    SG +     +LP DPY+RA+ RFW A++D+K++ AL  +  A    A+  A            +AF   S G+ FF G     G LD+A G +L  LR  E+++ + L+D   TP L  W++RF A  A K V+P+T+K+ +
Sbjct:    1 MRVLGGEVSPFTARARLALDLRGVAYELLDEPLGPKKSDRLLAANPVYGKIPVLLLPDGRAICESAVIVQYIEDVARESGGAEAGSLLLPDDPYERAMHRFWTAFIDDKFWPALDAVSLAPTPGARAQAAEDTRAALSLLEEAFKDRSNGRAFFSGGDAAPGLLDLALGCFLPALRACERLHGLSLIDASATPLLDGWSQRFAAHPAAKRVLPDTEKVVQ 220          
The following BLAST results are available for this feature:
BLAST of DR403278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
GSTU6_ORYSJ1.797e-5349.31Probable glutathione S-transferase GSTU6 OS=Oryza ... [more]
GSTX6_SOYBN2.601e-4444.29Probable glutathione S-transferase OS=Glycine max ... [more]
GSTX4_TOBAC1.686e-4342.53Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXC_TOBAC1.093e-4241.63Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTX1_TOBAC1.477e-3943.06Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_SOLTU1.477e-3943.54Probable glutathione S-transferase OS=Solanum tube... [more]
GSTX3_TOBAC3.291e-3943.06Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX2_TOBAC5.613e-3944.02Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXA_TOBAC7.331e-3940.65Probable glutathione S-transferase parA OS=Nicotia... [more]
GSTX2_MAIZE1.383e-3740.00Probable glutathione S-transferase BZ2 OS=Zea mays... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244H05 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244H05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403278 ID=DR403278; Name=DR403278; organism=Citrus sinensis; type=EST; length=702bp
GGGGATTTCATTTCAGTTCCGTGAGCAGAGCTTAGAGAGAAAAAAAAAGA
AAATGGCAANNNNNNACGTGAAGGTTTTGGGTTTTTCGCCAAGCCCATTT
GTGATGAGGGCAAGAATCGCACTTAAGATCAAGTCTGTGGAGTATGAGTT
TCTGGAGGAGAATTTGGGATCCAAAAGCGAGCTTCTGCTTAAATCAAACC
CTGTTCACAAGAAAATCCCAGTTCTGATTCACAATGATAAGCCTGTTTGC
GAATCTCTCATTATTGTCGAGTACGTGGATGAGGCTTGGTCCTCTTCAGG
TCCCTCTATTCTTCCTTCTGATCCTTATGACCGTGCGGTTGCTCGTTTCT
GGGCCGCTTACGTTGATGAGAAGTGGTTCTCTGCCTTGAGAGACATTGGT
AGTGCAAATGGAGCGGAAGCTAAGAAAGCTGCGATTGAGCAATTGATTGA
AGTCTTGGTTTTGCTGGAGGACGCTTTTGTTAAGTGTAGCAAAGGGAAGC
CTTTCTTTGGTGGAAACCAAATTGGGTTTCTTGACATTGCATTTGGTAGC
TACTTGGGATGGCTGAGAGTGACAGAGAAAATTAATGAGGTGAAGCTCCT
TGATGAAGTCAAAACTCCTGGACTGTTGAAATGGGCTGAGAGATTCTGTG
CTGACGCTGCTGTCAAAGATGTTATGCCTGAGACCGATAAGCTTGCCAAA
CT
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