DR403178

Overview
NameDR403178
Unique NameDR403178
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length757
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10071 contig Csv1_Contig10071:1..757. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403178 vs. ExPASy Swiss-Prot
Match: BURP3_ORYSJ (BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=BURP3 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.680e-36
Identity = 73/124 (58.87%), Postives = 90/124 (72.58%), Query Frame = 1
Query:  385 QGGVSVSTGHKGKPVYVGVSPFN*VYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKREQXXCATS 756
            +GGV V+   +GKPV+V V+PF   YAA E QLHDDPN ALFFLEKDLHPG  M +HFT T+ G  FL R  A + PFSS+K+PEI ++FSVKPGSVEA  M  T+++CE P  + E+  CATS
Sbjct:  172 KGGVGVNVKPRGKPVHVNVAPFIYNYAATETQLHDDPNVALFFLEKDLHPGKTMAVHFTATTAGEKFLPRSEADAMPFSSEKVPEILSRFSVKPGSVEAAEMAQTLRDCEAPPAQGERKACATS 295          

HSP 2 Score: 24.2534 bits (51), Expect = 2.680e-36
Identity = 11/23 (47.83%), Postives = 15/23 (65.22%), Query Frame = 2
Query:  212 LQPDVLEDKSTSVNVGKGGVNVD 280
            +QP   +   T+V VGKGGV V+
Sbjct:  133 VQPGYGKPGGTTVGVGKGGVGVN 155          
BLAST of DR403178 vs. ExPASy Swiss-Prot
Match: RD22_ARATH (Dehydration-responsive protein RD22 OS=Arabidopsis thaliana GN=RD22 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 9.992e-29
Identity = 69/131 (52.67%), Postives = 86/131 (65.65%), Query Frame = 1
Query:  385 QGGVSVSTGHKGKPVYVGV----SPFN*VYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSN--GAT-FLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKREQXXCATS 756
            +GGV+V T HKG+P+YVGV    +PF   YAA E QLHDDPN ALFFLEKDL  G +MN+ F       G T FL R  A++ PF S+K  E   +FSV+ GS EAE+M+ TI+ECE   +  E+  CATS
Sbjct:  131 KGGVTVHTRHKGRPIYVGVKPGANPFVYNYAAKETQLHDDPNAALFFLEKDLVRGKEMNVRFNAEDGYGGKTAFLPRGEAETVPFGSEKFSETLKRFSVEAGSEEAEMMKKTIEECEARKVSGEEKYCATS 261          

HSP 2 Score: 23.0978 bits (48), Expect = 9.992e-29
Identity = 10/14 (71.43%), Postives = 10/14 (71.43%), Query Frame = 2
Query:  236 KSTSVNVGKGGVNV 277
            K T V VGKGGV V
Sbjct:  123 KRTDVGVGKGGVTV 136          
BLAST of DR403178 vs. ExPASy Swiss-Prot
Match: BURP6_ORYSJ (BURP domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=BURP6 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.104e-17
Identity = 46/90 (51.11%), Postives = 57/90 (63.33%), Query Frame = 1
Query:  487 DDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKREQXXCATS 756
            +D    +FFLEKDL PG KM LHFT+ + GA  L R  A S PF+S+KLPEI +Q SV  GS  A+ M++T+ ECE      E   CATS
Sbjct:   21 EDTVNNVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRADSVPFASEKLPEILSQLSVPAGSPAADAMRSTLAECEAAPQAGEAKRCATS 110          
BLAST of DR403178 vs. ExPASy Swiss-Prot
Match: BURP5_ORYSJ (BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=BURP5 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.541e-16
Identity = 49/120 (40.83%), Postives = 63/120 (52.50%), Query Frame = 1
Query:  397 SVSTGHKGKPVYVGVSPFN*VYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKREQXXCATS 756
            +V    +G  V +   P N    A   Q   DP   LFFLE +L     + LHF     G  FL R  A + PFSS  L EI  +F V+PGSV+A +++NT+ ECE P  K E+  CATS
Sbjct:   73 AVGLPKRGDRVQIRYGP-NIYGLAASQQFFKDPTMGLFFLETNLQSSKSIKLHFANMMAGTKFLPRGEADAVPFSSKDLQEILARFGVRPGSVDASVVKNTLLECELPANKGEKKACATS 191          
BLAST of DR403178 vs. ExPASy Swiss-Prot
Match: BURP2_ORYSJ (BURP domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=BURP2 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.628e-16
Identity = 47/103 (45.63%), Postives = 64/103 (62.14%), Query Frame = 1
Query:  463 AANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKRE-----QXXCATS 756
            AA+ ++  +D   ++FFLEKDL PG KM LHFT+ + GA  L R  A S PF+S+KLPEI +Q S+  GS  A+ M++T+  CE   I  E     +  CATS
Sbjct:   52 AASASKDKEDTVGSVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRADSVPFASEKLPEILSQLSIPAGSPTADAMRSTLAVCEAARIASETAPKHKHYCATS 154          
BLAST of DR403178 vs. ExPASy Swiss-Prot
Match: BURPH_ORYSJ (BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica GN=BURP17 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.646e-16
Identity = 47/97 (48.45%), Postives = 62/97 (63.92%), Query Frame = 1
Query:  478 QLHDDPNTALFFLEKDLHPGMKMN--LHFTQ--TSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKREQXXCATS 756
            +L  DP+ ALFFLEK+L  G K+N  LHF     +  + FL R  A S PFSS +LPEI ++F V+PGS +A  M  T+++CE P  K E+  CATS
Sbjct:  353 ELLKDPDMALFFLEKNLQQGKKINNALHFANLLATTNSKFLPRGKADSIPFSSKELPEILDRFGVRPGSDDAAEMSATLQDCELPANKGEKKACATS 449          
BLAST of DR403178 vs. ExPASy Swiss-Prot
Match: BURP1_ORYSJ (BURP domain-containing protein 1 OS=Oryza sativa subsp. japonica GN=BURP1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.104e-14
Identity = 47/110 (42.73%), Postives = 67/110 (60.91%), Query Frame = 1
Query:  439 VSPFN*VYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKRE----QXXCATS 756
            +SP + V +A++    +D    +FFLEKDL PG KM LHFT+ + GA  L R  A+S PF+S++LPEI +Q S+   S  A+ M +T+ ECE   +  E    +  CATS
Sbjct:   46 ISPASSVGSASK----EDTVGNVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRAESVPFASERLPEILSQLSIPAVSPTADAMWSTLAECEAARLAGETTKHKHYCATS 151          
BLAST of DR403178 vs. ExPASy Swiss-Prot
Match: BURP8_ORYSJ (BURP domain-containing protein 8 OS=Oryza sativa subsp. japonica GN=BURP8 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 3.213e-14
Identity = 47/101 (46.53%), Postives = 61/101 (60.40%), Query Frame = 1
Query:  463 AANENQLHDDPNT-ALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDP--GIKREQXXCATS 756
            A+ E+   D+ +T A+FFLEKDL PG K+ LHFT+    A  L R  A + PF+S+KLPEI  Q SV  GS  AE M+ T+ ECE    G + +   C TS
Sbjct:   82 ASQEDTDMDEVSTDAVFFLEKDLFPGSKITLHFTRGGACAMVLLRGRADAIPFASEKLPEILTQLSVPAGSRAAEDMRTTLAECEAALLGARDQAKHCVTS 182          
BLAST of DR403178 vs. ExPASy Swiss-Prot
Match: BURP7_ORYSJ (BURP domain-containing protein 7 OS=Oryza sativa subsp. japonica GN=BURP7 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.671e-11
Identity = 33/62 (53.23%), Postives = 42/62 (67.74%), Query Frame = 1
Query:  505 LFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIM 690
            +FFLEKDL PG K+ LHFT+ + GA  L R  A S P +++KLPEI +Q SV  GS  A+ M
Sbjct:   64 VFFLEKDLFPGSKLTLHFTRATAGAALLPRGRADSVPLATEKLPEILSQLSVPAGSPAADAM 125          
The following BLAST results are available for this feature:
BLAST of DR403178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
BURP3_ORYSJ2.680e-3658.87BURP domain-containing protein 3 OS=Oryza sativa s... [more]
RD22_ARATH9.992e-2952.67Dehydration-responsive protein RD22 OS=Arabidopsis... [more]
BURP6_ORYSJ3.104e-1751.11BURP domain-containing protein 6 OS=Oryza sativa s... [more]
BURP5_ORYSJ1.541e-1640.83BURP domain-containing protein 5 OS=Oryza sativa s... [more]
BURP2_ORYSJ2.628e-1645.63BURP domain-containing protein 2 OS=Oryza sativa s... [more]
BURPH_ORYSJ7.646e-1648.45BURP domain-containing protein 17 OS=Oryza sativa ... [more]
BURP1_ORYSJ1.104e-1442.73BURP domain-containing protein 1 OS=Oryza sativa s... [more]
BURP8_ORYSJ3.213e-1446.53BURP domain-containing protein 8 OS=Oryza sativa s... [more]
BURP7_ORYSJ5.671e-1153.23BURP domain-containing protein 7 OS=Oryza sativa s... [more]
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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244B04 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244B04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403178 ID=DR403178; Name=DR403178; organism=Citrus sinensis; type=EST; length=757bp
GGGGATGAAAGCCTAGATTTTAGATTACATACTATCTTGTATTCTGGGTG
TCTTTTAAAACATACTCAAAGCTATAATGGAGTTTCACTTGTTGCCCATC
CTTGCTTTCCTCAGTCTAGCACTGGTAGCAAGTCATGCTGACATTTCTCC
TGAGCTTTACTGGAAAACTGTACTGCCAAATTCCCCGATGCCAAAAGCTG
TCAAAGATCTTCTACAGCCAGATGTGCTGGAAGACAAAAGCACCTCTGTC
AACGTAGGGAAGGGTGGTGTCAATGTGGATGCAGGGAAAGGAAAGCCCGG
TGGTGGCACCCATGTGAATGTTGGGGGTAAGGGCGTTGGTGTAAACACTG
GAAAGCCTGACAAAAGAACCAGTGTTGGTGTTGGCAAGGAGGAGTATCCG
TAAGTACAGGACACAAGGGAAAGCCAGTTTATGTTGGAGTAAGCCCATTC
AACTAAGTATATGCTGCAAATGAGAACCAACTCCATGATGACCCGAATAC
AGCTCTTTTCTTCTTGGAAAAGGACTTGCATCCTGGCATGAAGATGAACT
TGCACTTCACTCAAACTTCAAATGGAGCAACTTTCTTATCTCGCCAAGCT
GCCAAATCAACTCCTTTCTCGTCTGACAAATTGCCTGAGATCTTTAACCA
GTTTTCCGTGAAACCTGGATCAGTTGAAGCTGAAATAATGCAGAACACAA
TCAAAGAATGTGAAGACCCTGGCATTAAAAGAGAGCAGAANNATTGTGCA
ACTTCAC
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