CX052925
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX052925 vs. ExPASy Swiss-Prot
Match: SCL9_ARATH (Scarecrow-like protein 9 OS=Arabidopsis thaliana GN=SCL9 PE=2 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 2.358e-66 Identity = 115/165 (69.70%), Postives = 137/165 (83.03%), Query Frame = 2 Query: 2 KNLLDETIAVDSSRNIFLNFIRKINPHMFIHGITNGAYNAPFFVTRFREALFHFSAMFDMLETIVPREDRERMVIEKDIFGWEALNVVACEGWERVERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDRVRSGYHKDFVIDEDNRWLLQGWKGRIIYALSAWKP 496 +NL DE++ V+S R+ LN I KINP +F+ GI NGAYNAPFFVTRFREALFHFS++FDMLETIVPRED ERM +E ++FG EALNV+ACEGWERVERPETYKQW VR +R+G VQ+P D I+K + +V + YHKDFVID+DNRWLLQGWKGR + ALS WKP Sbjct: 550 ENLHDESVKVESCRDTVLNLIGKINPDLFVFGIVNGAYNAPFFVTRFREALFHFSSIFDMLETIVPREDEERMFLEMEVFGREALNVIACEGWERVERPETYKQWHVRAMRSGLVQVPFDPSIMKTSLHKVHTFYHKDFVIDQDNRWLLQGWKGRTVMALSVWKP 714
BLAST of CX052925 vs. ExPASy Swiss-Prot
Match: SCL14_ARATH (Scarecrow-like protein 14 OS=Arabidopsis thaliana GN=SCL14 PE=2 SV=2) HSP 1 Score: 214.927 bits (546), Expect = 3.194e-55 Identity = 98/165 (59.39%), Postives = 130/165 (78.79%), Query Frame = 2 Query: 2 KNLLDETIAVDSSRNIFLNFIRKINPHMFIHGITNGAYNAPFFVTRFREALFHFSAMFDMLETIVPREDRERMVIEKDIFGWEALNVVACEGWERVERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDRVRSGYHKDFVIDEDNRWLLQGWKGRIIYALSAWKP 496 +NLLDET+ V+S R+ L IRKINP++FI I +G YNAPFFVTRFREALFH+SA+FDM ++ + RED R++ EK+ +G E +NVVACEG ERVERPETYKQWQ R +RAGF QLPL++++++ ++ +GY K+F +D++ WLLQGWKGRI+YA S W P Sbjct: 602 RNLLDETVLVNSPRDAVLKLIRKINPNVFIPAILSGNYNAPFFVTRFREALFHYSAVFDMCDSKLAREDEMRLMYEKEFYGREIVNVVACEGTERVERPETYKQWQARLIRAGFRQLPLEKELMQNLKLKIENGYDKNFDVDQNGNWLLQGWKGRIVYASSLWVP 766
BLAST of CX052925 vs. ExPASy Swiss-Prot
Match: SCL33_ARATH (Scarecrow-like protein 33 OS=Arabidopsis thaliana GN=SCL33 PE=3 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 4.612e-54 Identity = 99/167 (59.28%), Postives = 129/167 (77.25%), Query Frame = 2 Query: 2 KNLLDETIAVDSSRNIFLNFIRKINPHMFIHGITNGAYNAPFFVTRFREALFHFSAMFDMLETIVPREDRERMVIEKDIFGWEALNVVACEGWERVERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDRVRSGYH-KDFVIDEDNRWLLQGWKGRIIYALSAWKPV 499 +NLLDET+AV S R+ L IRKI P +FI GI +G+YNAPFFVTRFRE LFH+S++FDM +T + RED R++ EK+ +G E +NVVACEG ERVERPE+YKQWQ R +RAGF Q+PL++++V++ V SGY K+F +D+D WLLQGWKGRI+Y S W P+ Sbjct: 528 RNLLDETVAVHSPRDTVLKLIRKIKPDVFIPGILSGSYNAPFFVTRFREVLFHYSSLFDMCDTNLTREDPMRVMFEKEFYGREIMNVVACEGTERVERPESYKQWQARAMRAGFRQIPLEKELVQKLKLMVESGYKPKEFDVDQDCHWLLQGWKGRIVYGSSIWVPL 694
BLAST of CX052925 vs. ExPASy Swiss-Prot
Match: SCL11_ARATH (Scarecrow-like protein 11 OS=Arabidopsis thaliana GN=SCL11 PE=2 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 9.000e-50 Identity = 88/163 (53.99%), Postives = 120/163 (73.62%), Query Frame = 2 Query: 14 DETIAVDSSRNIFLNFIRKINPHMFIHGITNGAYNAPFFVTRFREALFHFSAMFDMLETIVPRED--RERMVIEKDIFGWEALNVVACEGWERVERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDRVRSGYHKDFVIDEDNRWLLQGWKGRIIYALSAWKP 496 DET+++DS R+ L R INP +F+ NG YN+PFF+TRFREALFH+S++FDM +T + ED + R ++E+++ +A++V++CEG ER RPETYKQW+VR LRAGF + + I+K A + VR YH+DFVID DN W+LQGWKGR+IYA S WKP Sbjct: 437 DETVSLDSPRDTVLKLFRDINPDLFVFAEINGMYNSPFFMTRFREALFHYSSLFDMFDTTIHAEDEYKNRSLLERELLVRDAMSVISCEGAERFARPETYKQWRVRILRAGFKPATISKQIMKEAKEIVRKRYHRDFVIDSDNNWMLQGWKGRVIYAFSCWKP 599
BLAST of CX052925 vs. ExPASy Swiss-Prot
Match: SCL30_ARATH (Scarecrow-like protein 30 OS=Arabidopsis thaliana GN=SCL30 PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.619e-49 Identity = 88/161 (54.66%), Postives = 117/161 (72.67%), Query Frame = 2 Query: 14 DETIAVDSSRNIFLNFIRKINPHMFIHGITNGAYNAPFFVTRFREALFHFSAMFDMLETIVPREDRERMVIEKDIFGWEALNVVACEGWERVERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDRVRSGYHKDFVIDEDNRWLLQGWKGRIIYALSAWKP 496 DET++++S R+ L R INP +F+ NG YN+PFF+TRFREALFH S++FDM ET + +D R ++E+++ +A++V+ACEG ER RPETYKQWQVR LRAGF L + IVK + V+ YHKDFVID DN W+ QGWKGR++YA+S WKP Sbjct: 420 DETVSLNSPRDTALKLFRDINPDLFVFAEINGTYNSPFFLTRFREALFHCSSLFDMYETTLSEDDNCRTLVERELIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFRPAKLSKQIVKDGKEIVKERYHKDFVIDNDNHWMFQGWKGRVLYAVSCWKP 580
BLAST of CX052925 vs. ExPASy Swiss-Prot
Match: SCL34_ARATH (Scarecrow-like protein 34 OS=Arabidopsis thaliana GN=SCL34 PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 7.619e-49 Identity = 87/167 (52.10%), Postives = 129/167 (77.25%), Query Frame = 2 Query: 2 KNLLDETIAVDSS-RNIFLNFIRKINPHMFIHGITNGAYNAPFFVTRFREALFHFSAMFDMLETIVPREDRERMVIEKDIFGWEALNVVACEGWERVERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDRVRS-GYHKDFVIDEDNRWLLQGWKGRIIYALSAWKP 496 KNL DET + ++ R+ L IR +NP +FIH I NG++NAPFF++RF+EA++H+SA+FDM ++ +PR+++ER+ E++ +G EA+NV+ACE +RVERPETY+QWQVR +RAGF Q + ++V+ +++ YHKDFV+DE+++WLLQGWKGR +YA S W P Sbjct: 463 KNLQDETGSEENCPRDAVLKLIRNMNPDVFIHAIVNGSFNAPFFISRFKEAVYHYSALFDMFDSTLPRDNKERIRFEREFYGREAMNVIACEEADRVERPETYRQWQVRMVRAGFKQKTIKPELVELFRGKLKKWRYHKDFVVDENSKWLLQGWKGRTLYASSCWVP 629
BLAST of CX052925 vs. ExPASy Swiss-Prot
Match: SCL31_ARATH (Scarecrow-like protein 31 OS=Arabidopsis thaliana GN=SCL31 PE=2 SV=2) HSP 1 Score: 189.119 bits (479), Expect = 1.877e-47 Identity = 83/156 (53.21%), Postives = 118/156 (75.64%), Query Frame = 2 Query: 32 DSSRNIFLNFIRKINPHMFIHGITNGAYNAPFFVTRFREALFHFSAMFDMLETIVPREDRERMVIEKDIFGWEALNVVACEGWERVERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDRVRS-GYHKDFVIDEDNRWLLQGWKGRIIYALSAWKP 496 D R+ FL IR +NP++F+ NG++NAPFF TRF+EALFH+SA+FD+ + +E+ ER+ E + +G E +NV+ACEG +RVERPETYKQWQVR +RAGF Q P++ ++V+ ++++ GYHKDFV+DED+ W LQGWKGRI+++ S W P Sbjct: 506 DCPRDGFLKLIRDMNPNVFLSSTVNGSFNAPFFTTRFKEALFHYSALFDLFGATLSKENPERIHFEGEFYGREVMNVIACEGVDRVERPETYKQWQVRMIRAGFKQKPVEAELVQLFREKMKKWGYHKDFVLDEDSNWFLQGWKGRILFSSSCWVP 661
BLAST of CX052925 vs. ExPASy Swiss-Prot
Match: SCL21_ARATH (Scarecrow-like protein 21 OS=Arabidopsis thaliana GN=SCL21 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.824e-19 Identity = 50/163 (30.67%), Postives = 89/163 (54.60%), Query Frame = 2 Query: 5 NLLDETIAVDSSRNIFLNFIRKINPHMFIHGITNGAYNAPFFVTRFREALFHFSAMFDMLETIVPREDRERMVIEKDIFGWEALNVVACEGWERVERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDRVRSGYHKDFVIDEDNRWLLQGWKGRIIYALSAWK 493 +L DE++++++ R+ L ++ ++P + N F+ RF E L +++AMF+ ++ ++PR +ER+ IE+ + +N++ACEG ER+ER E +W+ R AGF PL I+ + Y + I+E + L GW RI+ + AWK Sbjct: 252 HLPDESVSMENHRDRLLRMVKSLSPKVVTLVEQECNTNTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLS-SIISATIRALLRDYSNGYAIEERDGALYLGWMDRILVSSCAWK 413
BLAST of CX052925 vs. ExPASy Swiss-Prot
Match: CIGR1_ORYSJ (Chitin-inducible gibberellin-responsive protein 1 OS=Oryza sativa subsp. japonica GN=CIGR1 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.073e-18 Identity = 48/159 (30.19%), Postives = 89/159 (55.97%), Query Frame = 2 Query: 14 DETIAVDSSRNIFLNFIRKINPHMFIHGITNGAYNAPFFVTRFREALFHFSAMFDMLETIVPREDRERMVIEKDIFGWEALNVVACEGWERVERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDRVRSGYHKDFVIDEDNRWLLQGWKGRIIYALSAW 490 DE++ V++ R+ L ++ ++P + N F+ RF E + ++SAMF+ ++ +PR+++ER+ +E+ + +N++ACEG +RVER E +W+ R AGF PL V ++ + Y + +DE + +L GW+ R + + SAW Sbjct: 413 DESVDVNNPRDGLLRMVKGLSPKVTTLVEQESHTNTTPFLMRFGETMEYYSAMFESIDANLPRDNKERISVEQHCLAKDIVNIIACEGKDRVERHELLGKWKSRLTMAGFRPYPLS-SYVNSVIRKLLACYSDKYTLDEKDGAMLLGWRSRKLISASAW 570
BLAST of CX052925 vs. ExPASy Swiss-Prot
Match: SCL1_ARATH (Scarecrow-like protein 1 OS=Arabidopsis thaliana GN=SCL1 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.830e-18 Identity = 47/160 (29.38%), Postives = 85/160 (53.12%), Query Frame = 2 Query: 14 DETIAVDSSRNIFLNFIRKINPHMFIHGITNGAYNAPFFVTRFREALFHFSAMFDMLETIVPREDRERMVIEKDIFGWEALNVVACEGWERVERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDRVRSGYHKDFVIDEDNRWLLQGWKGRIIYALSAWK 493 DE++ + R+ L+ ++ +NP + + N F RF EA ++SA+F+ L+ +PRE +ERM +E+ + +N+VACEG ER+ER E +W+ R + AGF P+ + + ++ Y + + E+ L W+ + + SAW+ Sbjct: 434 DESVTTVNQRDELLHMVKSLNPKLVTVVEQDVNTNTSPFFPRFIEAYEYYSAVFESLDMTLPRESQERMNVERQCLARDIVNIVACEGEERIERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQNLIKQQYCNKYKLKEEMGELHFCWEEKSLIVASAWR 593 The following BLAST results are available for this feature:
BLAST of CX052925 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CX052925 ID=CX052925; Name=CX052925; organism=Citrus sinensis; type=EST; length=692bpback to top |