DN621636
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN621636 vs. ExPASy Swiss-Prot
Match: AB20I_ARATH (ABC transporter I family member 20 OS=Arabidopsis thaliana GN=ABCI20 PE=2 SV=1) HSP 1 Score: 389.037 bits (998), Expect = 1.294e-107 Identity = 192/239 (80.33%), Postives = 208/239 (87.03%), Query Frame = 3 Query: 6 MAVMENSKP---TVEINALKFTYPGIDGHPPPGSTPLINDFTLTLNAGDRCLLVGSNGAGKTTILKIIGGKHMVEPEMVKVLGRSAFHDTALTSSGDLSYLGGEWRREVAFAGFEVPIQMDVSAEKMIFGVAGIDPRRRAELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXXXXXXXXXXKECEERGATIIYATHIFDGLENWPSHIVYVAHGKLQLAM 713 MAV E K TVEI+ L+FTYPGIDGHPPPGS PLI DF++TLN+ DRCLLVGSNGAGKTTILKI+GGKHMVEP MV+VLGRSAFHDT LTSSGDL YLGGEWRR+VAFAGFEVPIQMD+SAEKMIFGVAGIDP+RR ELIKVLDID+SWR+HKVSDGQRRRVQICMGLLKPFKVLLLDEIT KECEERGATIIYATHIFDGLE+WP+HIVYVA+GKLQLA+ Sbjct: 1 MAVTEEEKKRNSTVEISGLRFTYPGIDGHPPPGSKPLIEDFSITLNSSDRCLLVGSNGAGKTTILKILGGKHMVEPHMVRVLGRSAFHDTGLTSSGDLCYLGGEWRRDVAFAGFEVPIQMDISAEKMIFGVAGIDPQRRDELIKVLDIDISWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLEDWPTHIVYVANGKLQLAL 239
BLAST of DN621636 vs. ExPASy Swiss-Prot
Match: AB21I_ARATH (ABC transporter I family member 21 OS=Arabidopsis thaliana GN=ABCI21 PE=2 SV=1) HSP 1 Score: 257.684 bits (657), Expect = 4.498e-68 Identity = 132/226 (58.41%), Postives = 162/226 (71.68%), Query Frame = 3 Query: 36 VEINALKFTYPGIDGHPPPGSTPLINDFTLTLNAGDRCLLVGSNGAGKTTILKIIGGKHMVEPE-MVKVLGRSAFHDTALTSSGDLSYLGGEWRREVAFAGFEVPIQMDVSAEKMIFGVAGIDPRRRAELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXXXXXXXXXXKECEERGATIIYATHIFDGLENWPSHIVYVAHGKLQLA 710 + ++ ++F+Y D P+ DF L L AG RCLLVG+NG+GKTT+LKI+ GKHMV + +V+VL RSAFHDT L SGDLSYLGG W + AG ++P+Q D SAE MIFGV GIDP RR +LI +LDI+L WRMHKVSDGQRRRVQICMGLL PFKVLLLDE+T +ECE+RGATI+YATHIFDGLE W SH+ Y+ G+L+L+ Sbjct: 13 IRVSGMQFSYDVQD--------PIFFDFNLDLPAGSRCLLVGANGSGKTTLLKILAGKHMVGGKNVVQVLDRSAFHDTELVCSGDLSYLGGSWSKTAGSAG-DIPLQGDFSAEHMIFGVEGIDPFRREKLIDLLDINLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVVARMDLLEFFKEECEQRGATIVYATHIFDGLETWASHLAYINGGELKLS 229
BLAST of DN621636 vs. ExPASy Swiss-Prot
Match: AB19I_ARATH (ABC transporter I family member 19 OS=Arabidopsis thaliana GN=ABCI19 PE=2 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 6.495e-67 Identity = 130/223 (58.30%), Postives = 158/223 (70.85%), Query Frame = 3 Query: 36 VEINALKFTYPGIDGHPPPGSTPLINDFTLTLNAGDRCLLVGSNGAGKTTILKIIGGKHMVEPE-MVKVLGRSAFHDTALTSSGDLSYLGGEWRREVAFAGFEVPIQMDVSAEKMIFGVAGIDPRRRAELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXXXXXXXXXXKECEERGATIIYATHIFDGLENWPSHIVYVAHGKL 701 + ++ ++F Y D P+ DF L L AG RCLLVG+NG+GKTT+LKI+ GKHMV + +V+VL RSAFHDT L SGDLSYLGG W + V AG EVP+Q D SAE MIFGV G DP RR +LI +LDI+L WRMHKVSDGQ+RRVQICMGLL PFKVLLLDE+T +EC++RGATI+YATHIFDGLE W +H+ Y+ G+L Sbjct: 14 IRVSGMQFAYEVED--------PIFFDFNLDLPAGSRCLLVGANGSGKTTLLKILAGKHMVGGKNVVQVLSRSAFHDTQLVCSGDLSYLGGSWSKTVGSAG-EVPLQGDFSAEHMIFGVEGTDPVRREKLIDLLDINLQWRMHKVSDGQKRRVQICMGLLHPFKVLLLDEVTVDLDVVARMDLLEFFKEECDQRGATIVYATHIFDGLETWATHLAYIQDGEL 227
BLAST of DN621636 vs. ExPASy Swiss-Prot
Match: YE31_SCHPO (Uncharacterized ABC transporter ATP-binding protein C20G4.01 OS=Schizosaccharomyces pombe GN=SPAC20G4.01 PE=4 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 7.995e-41 Identity = 91/199 (45.73%), Postives = 121/199 (60.80%), Query Frame = 3 Query: 108 INDFTLTLNAGDRCLLVGSNGAGKTTILKIIGGKHMVEPEMVKVLGRSAFHDTALTSSGDLSYLGGEWRREVAFAGFEVPIQMDVSAEKMIFGVAGID-PRRRAELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXXXXXXXXXXKECEERGATIIYATHIFDGLENWPSHIVYVAHGKL 701 ++ TL L G R LLVG+NGAGK+T+LK++ GK + + + V G+ F + SS YLG EW I D+S ++I V G RR LI +LDIDL WRMH VSDG+RRRVQ+CMGLL+PF+VLLLDE+T +E E R ATI+YATHIFDGL WP+H+V+++ G++ Sbjct: 20 LDHVTLDLPKGSRTLLVGANGAGKSTLLKLLSGKSLAKAGHISVGGKDPFRE----SSSAFVYLGTEWVNNPV-------IHRDMSVARLIASVGGDKFAERRDFLISILDIDLRWRMHAVSDGERRRVQLCMGLLRPFEVLLLDEVTVDLDVLARADLLNFLQEETEVRNATIVYATHIFDGLAEWPTHLVHLSLGRI 207
BLAST of DN621636 vs. ExPASy Swiss-Prot
Match: CAF16_YEAST (CCR4-associated factor 16 OS=Saccharomyces cerevisiae GN=CAF16 PE=1 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.597e-33 Identity = 79/215 (36.74%), Postives = 116/215 (53.95%), Query Frame = 3 Query: 96 STPLINDFTLTLNAGDRCLLVGSNGAGKTTILKIIGGKHMVEPEMVKVLGRSAFHDTALTSSGD------------LSYLGGEWRREVAFAGFEVPIQMDVSAEKMIFGVAGIDPRRRAE-LIKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXXXXXXXXXXKECEERGATIIYATHIFDGLENWPSHIVYVAHGKL 701 S P + D L + R L+VG+NGAGK+T+LK++ GKH+ + V G F ++ D +YLG EW I D+ +++ + R R E L+++LDID+ WRMH++SDGQ+RRVQ+ MGLLKP++VLLLDE+T E E R +++YATHIFDGL WP+ + ++ GK+ Sbjct: 20 SDPSVVDINLQIPWNTRSLVVGANGAGKSTLLKLLSGKHLCLDGKILVNGLDPFSPLSMNQVDDDESVEDSTNYQTTTYLGTEWCHMSI-------INRDIGVLELLKSIGFDHFRERGERLVRILDIDVRWRMHRLSDGQKRRVQLAMGLLKPWRVLLLDEVTVDLDVIARARLLEFLKWETETRRCSVVYATHIFDGLAKWPNQVYHMKSGKI 227
BLAST of DN621636 vs. ExPASy Swiss-Prot
Match: Y149_LACPL (Putative ABC transporter ATP-binding protein lp_0149 OS=Lactobacillus plantarum GN=lp_0149 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.963e-11 Identity = 59/230 (25.65%), Postives = 107/230 (46.52%), Query Frame = 3 Query: 21 NSKPTVEINALKFTYPGIDGHPPPGSTPLINDFTLTLNAGDRCLLVGSNGAGKTTILKIIGGKHMVEPEMVKVLGRSAFHDTALTSSGDLSYLGGEWRREVAFAGFEVPIQMDVSAEKMIFGVAGIDPRRRAE-LIKVLDI--DLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXXXXXXXXXXKECEERGATIIYATHIFDGLENWPSHIVYVAHGKL 701 + +P + I L F G+ P + P+IND T+TL+ G+ LVG NG GK+T+ +I G M + ++ G S + + + Y+ + + ++ I +V+A ++ GVA + +RR + ++KV + W + +S GQ++RV I L+ +L+LDE T K +E+ TI+ TH + + + + HG + Sbjct: 297 HDQPLLAIEHLTF------GYDP--AKPIINDITVTLHQGEMISLVGQNGTGKSTLSNLITGFLMPQSGKMRFNGHSLADQSVKERADQIGYILQDPNQMIS----TTMIFDEVAAGLVLRGVADDEVKRRVQAVLKVCGLYEFRHWPISALSFGQKKRVTIAAILVLEPAMLILDEPTAGQDLQHYTEMMTFLTKINQEQHMTIMLITHDMHLMLEYTDRTIVLGHGNI 514 The following BLAST results are available for this feature:
BLAST of DN621636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN621636 ID=DN621636; Name=DN621636; organism=Citrus sinensis; type=EST; length=715bpback to top |