DN621633

Overview
NameDN621633
Unique NameDN621633
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length733
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN621633_ssr272 microsatellite DN621633_ssr272:272..281. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig5659 contig Csv1_Contig5659:405..1137. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621633 vs. ExPASy Swiss-Prot
Match: CIPKN_ARATH (CBL-interacting serine/threonine-protein kinase 23 OS=Arabidopsis thaliana GN=CIPK23 PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 6.896e-51
Identity = 96/120 (80.00%), Postives = 111/120 (92.50%), Query Frame = -2
Query:  373 LISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGDE 732
            LISTSQGLNL SLFEKQMGLVKR+TRFTSK   NEI++KIE AA+P+GFDVK NN+K+KL GEK+GRKG L+VATE+F+VAPSLYMVE+RKSGGDTLEFHKFYKNL+TGLKD+VWK+ DE
Sbjct:  338 LISTSQGLNLGSLFEKQMGLVKRKTRFTSKSSANEIVTKIEAAAAPMGFDVKTNNYKMKLTGEKSGRKGQLAVATEVFQVAPSLYMVEMRKSGGDTLEFHKFYKNLTTGLKDIVWKTIDE 457          
BLAST of DN621633 vs. ExPASy Swiss-Prot
Match: CIPKN_ORYSJ (CBL-interacting protein kinase 23 OS=Oryza sativa subsp. japonica GN=CIPK23 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.645e-44
Identity = 91/127 (71.65%), Postives = 104/127 (81.89%), Query Frame = -2
Query:  373 LISTSQGLNLSSLFEKQ-MGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWK------SGDE 732
            LISTSQGLNL +LFEKQ  G VKRETRF S+ P NEI+SKIE AA P+GF+V+K N+KLKLQGE  GRKG L++ATE+FEV PSLYMVELRKS GDTLEFHKFY N+S GLKDV+WK      +GDE
Sbjct:  317 LISTSQGLNLGTLFEKQSQGSVKRETRFASRLPANEILSKIEAAAGPMGFNVQKRNYKLKLQGENPGRKGQLAIATEVFEVTPSLYMVELRKSNGDTLEFHKFYHNISNGLKDVMWKPESSIIAGDE 443          
BLAST of DN621633 vs. ExPASy Swiss-Prot
Match: CIPK9_ORYSJ (CBL-interacting protein kinase 9 OS=Oryza sativa subsp. japonica GN=CIPK9 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.540e-42
Identity = 85/118 (72.03%), Postives = 102/118 (86.44%), Query Frame = -2
Query:  382 LISTSQGLNLSSLFEKQM-GLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKS 732
            LIS SQG NL +LFEK+M G+VKRET FTS+    EI+SKIEEA  PLGF+V+K N+K+KL+G+KTGRKG+LSVATE+FEVAPSL+MVELRK+GGDTLEFH FY N S+ LKD+VWKS
Sbjct:  329 LISRSQGFNLGNLFEKEMMGMVKRETSFTSQCTPQEIMSKIEEACGPLGFNVRKQNYKMKLKGDKTGRKGYLSVATEVFEVAPSLHMVELRKTGGDTLEFHNFYNNFSSELKDIVWKS 446          
BLAST of DN621633 vs. ExPASy Swiss-Prot
Match: CIPK9_ARATH (CBL-interacting serine/threonine-protein kinase 9 OS=Arabidopsis thaliana GN=CIPK9 PE=1 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 2.627e-42
Identity = 81/117 (69.23%), Postives = 104/117 (88.89%), Query Frame = -2
Query:  382 LISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKS 732
            LIS+S   +L +LFEKQ  LVK+ETRFTS+R  +EI+SK+EE A PLGF+V+K+N+K+K++G+K+GRKG LSVATE+FEVAPSL++VELRK+GGDTLEFHKFYKN S+GLKDVVW +
Sbjct:  322 LISSSSEFSLENLFEKQAQLVKKETRFTSQRSASEIMSKMEETAKPLGFNVRKDNYKIKMKGDKSGRKGQLSVATEVFEVAPSLHVVELRKTGGDTLEFHKFYKNFSSGLKDVVWNT 438          
BLAST of DN621633 vs. ExPASy Swiss-Prot
Match: CIPKW_ORYSJ (CBL-interacting protein kinase 32 OS=Oryza sativa subsp. japonica GN=CIPK32 PE=2 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 2.718e-39
Identity = 83/119 (69.75%), Postives = 97/119 (81.51%), Query Frame = -2
Query:  376 LISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGD 732
            LIS S GLNL +LF+ +    KRETRFTSK P  EI+ KIEEAA PLGFDV+K N+KL+L+  K GRKG+L+VATEI +VAPSL+MVE+RK+ GDTLEFHKFYKNLS  LKDVVWKS D
Sbjct:  315 LISMSAGLNLGNLFDSEQEF-KRETRFTSKCPPKEIVRKIEEAAKPLGFDVQKKNYKLRLEKVKAGRKGNLNVATEILQVAPSLHMVEVRKAKGDTLEFHKFYKNLSRTLKDVVWKSDD 432          
BLAST of DN621633 vs. ExPASy Swiss-Prot
Match: CIPKQ_ARATH (CBL-interacting serine/threonine-protein kinase 26 OS=Arabidopsis thaliana GN=CIPK26 PE=2 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 4.340e-37
Identity = 73/121 (60.33%), Postives = 98/121 (80.99%), Query Frame = -2
Query:  370 LISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGDET 732
            LIS S+ L+L +LFE++ G  KRETRF +K   N+++ KIEEA+ PLGFD++K N+K++L+    GRKG+L VATEIF+V+PSL+M+E+RK+ GDTLEFHKFYK LST L DVVWKSG+ +
Sbjct:  316 LISMSRALDLGNLFEEEEGF-KRETRFAAKGAANDLVQKIEEASKPLGFDIQKKNYKMRLENVTAGRKGNLRVATEIFQVSPSLHMIEVRKTKGDTLEFHKFYKKLSTSLNDVVWKSGESS 435          
BLAST of DN621633 vs. ExPASy Swiss-Prot
Match: CIPKX_ORYSJ (CBL-interacting protein kinase 33 OS=Oryza sativa subsp. japonica GN=CIPK33 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.649e-36
Identity = 84/135 (62.22%), Postives = 97/135 (71.85%), Query Frame = -2
Query:  376 LISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNN----------------FKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGD 732
            LIS S GLNL +LF+ +    KRETRFTSK P  EI+ KIEEAA PLGFDV+K N                FKL+L+  K GRKG+L+VATEI +VAPSL+MVE+RK+ GDTLEFHKFYKNLS  LKDVVWKS D
Sbjct:  315 LISMSAGLNLGNLFDSEQEF-KRETRFTSKCPPKEIVRKIEEAAKPLGFDVQKKNYKICSPCLTTICMNIPFKLRLEKVKAGRKGNLNVATEILQVAPSLHMVEVRKAKGDTLEFHKFYKNLSRTLKDVVWKSDD 448          
BLAST of DN621633 vs. ExPASy Swiss-Prot
Match: CIPKV_ORYSJ (CBL-interacting protein kinase 31 OS=Oryza sativa subsp. japonica GN=CIPK31 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.813e-36
Identity = 76/120 (63.33%), Postives = 97/120 (80.83%), Query Frame = -2
Query:  373 LISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGDE 732
            LIS +Q LNL +LFE +    KRETRFTS+ P  EII+KIEEAA PLGFD++K N+K++++  K GRKG+L+VATE+F+VAPSL++VEL+K+ GDTLEF KFY+ LST LKDVVWK   E
Sbjct:  323 LISLNQALNLDNLFEAKKEY-KRETRFTSQCPPKEIITKIEEAAKPLGFDIQKKNYKMRMENLKAGRKGNLNVATEVFQVAPSLHVVELKKAKGDTLEFQKFYRTLSTQLKDVVWKCDGE 441          
BLAST of DN621633 vs. ExPASy Swiss-Prot
Match: CIPK3_ARATH (CBL-interacting serine/threonine-protein kinase 3 OS=Arabidopsis thaliana GN=CIPK3 PE=1 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 9.049e-35
Identity = 73/119 (61.34%), Postives = 93/119 (78.15%), Query Frame = -2
Query:  376 LISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGD 732
            +IS S+GLNL +LF+ +    KRETR T +   NEII KIEEAA PLGFDV+K N+K++L+  K GRKG+L+VATEIF+VAPSL+MV++ KS GDTLEFHKFYK LS  L+ VVW + +
Sbjct:  317 IISMSRGLNLENLFDPEQEF-KRETRITLRGGANEIIEKIEEAAKPLGFDVQKKNYKMRLENVKAGRKGNLNVATEIFQVAPSLHMVQVSKSKGDTLEFHKFYKKLSNSLEQVVWTNNE 434          
BLAST of DN621633 vs. ExPASy Swiss-Prot
Match: CIPK3_ORYSJ (CBL-interacting protein kinase 3 OS=Oryza sativa subsp. japonica GN=CIPK3 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.000e-33
Identity = 70/119 (58.82%), Postives = 96/119 (80.67%), Query Frame = -2
Query:  376 LISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGD 732
            LIS ++GLNL + FE      KRETRFTS+ P  EII++IEEAA+ LGF+++K N++++++  K GRKGHL++ATE+F+VAPSL++VEL+K+ GDTLEF KFY+ LST LKDVVW+  D
Sbjct:  322 LISLNKGLNLDNFFESDKKY-KRETRFTSQCPPKEIINRIEEAANLLGFNIQKRNYRMRMENIKEGRKGHLNIATEVFQVAPSLHVVELKKAKGDTLEFQKFYQTLSTQLKDVVWELED 439          
The following BLAST results are available for this feature:
BLAST of DN621633 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
CIPKN_ARATH6.896e-5180.00CBL-interacting serine/threonine-protein kinase 23... [more]
CIPKN_ORYSJ1.645e-4471.65CBL-interacting protein kinase 23 OS=Oryza sativa ... [more]
CIPK9_ORYSJ1.540e-4272.03CBL-interacting protein kinase 9 OS=Oryza sativa s... [more]
CIPK9_ARATH2.627e-4269.23CBL-interacting serine/threonine-protein kinase 9 ... [more]
CIPKW_ORYSJ2.718e-3969.75CBL-interacting protein kinase 32 OS=Oryza sativa ... [more]
CIPKQ_ARATH4.340e-3760.33CBL-interacting serine/threonine-protein kinase 26... [more]
CIPKX_ORYSJ1.649e-3662.22CBL-interacting protein kinase 33 OS=Oryza sativa ... [more]
CIPKV_ORYSJ2.813e-3663.33CBL-interacting protein kinase 31 OS=Oryza sativa ... [more]
CIPK3_ARATH9.049e-3561.34CBL-interacting serine/threonine-protein kinase 3 ... [more]
CIPK3_ORYSJ1.000e-3358.82CBL-interacting protein kinase 3 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06P17_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621633 ID=DN621633; Name=DN621633; organism=Citrus sinensis; type=EST; length=733bp
TTTACATATATTGATTTTTATTGAATTTTCATGGTCCATAGACAAGTCAC
TAAAAACAAACAAAATGAAAATGACAGTGGACTGAGAGTCTTTTTGATTA
TTTGCAGGTAATTGACTACGTTCAATATCCGTTGAGATGATACAACTGGA
AGTCTGAAACCACACAAAAGCCAAACCAAGGTACACGAGAAGTGAGTTCT
GAATCACAAATGAAGGAAACACATGGCCTAGAGGATAAAATACAAAGCTG
AGATACAATGGTGCAAAAGCAATATATATATTTGCTGGAGATATTCAGCA
GTGCAAGTCATGAAAGGAAATCCGCTATTGAGACCCTGCGCCACCAGCGA
CTGCAGATCCTTCAACAATTGTTTCATCTCCTGATTTCCAAACAACATCT
TTCAGCCCAGTCGAAAGGTTTTTGTAAAACTTGTGAAATTCTAAGGTATC
TCCTCCAGATTTTCGAAGCTCAACCATGTAAAGTGAAGGGGCCACCTCAA
AAATCTCTGTTGCAACAGATAAATGACCCTTGCGTCCAGTTTTTTCCCCT
TGAAGCTTCAACTTGAAATTATTTTTCTTCACATCAAAACCCAAAGGCGA
TGCAGCTTCCTCAATTTTCGATATAATTTCGTTAACAGGACGTTTGGATG
TAAATCTTGTTTCTCGTTTCACAAGTCCCATTTGCTTTTCAAAAAGGGAA
CTGAGGTTGAGTCCCTGAGATGTGGAGATCAAC
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