DN621618

Overview
NameDN621618
Unique NameDN621618
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length741
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621618 vs. ExPASy Swiss-Prot
Match: CKX5_ARATH (Cytokinin dehydrogenase 5 OS=Arabidopsis thaliana GN=CKX5 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.092e-25
Identity = 56/88 (63.64%), Postives = 64/88 (72.73%), Query Frame = -1
Query:  487 GEEMQSLEYLNHQNRQILKFCDEAGIKAKQYLPHYTTQEEWVDHFGDKWGQFYQRKMEFDPRYILATGQRIFK--------PSFQSSS 726
            GEE Q LEYL  QNR+IL+FC++A I  KQYLPH+ TQEEWV HFGDKW +F   K EFDPR+ILATGQRIF+        PS  SSS
Sbjct:  449 GEETQKLEYLKDQNRRILEFCEQAKINVKQYLPHHATQEEWVAHFGDKWDRFRSLKAEFDPRHILATGQRIFQNPSLSLFPPSSSSSS 536          
BLAST of DN621618 vs. ExPASy Swiss-Prot
Match: CKX6_ARATH (Cytokinin dehydrogenase 6 OS=Arabidopsis thaliana GN=CKX6 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.215e-18
Identity = 42/73 (57.53%), Postives = 54/73 (73.97%), Query Frame = -1
Query:  490 LEYLNHQNRQILKFCDEAGIKAKQYLPHYTTQEEWVDHFGDKWGQFYQRKMEFDPRYILATGQRIFKPSFQSS 708
            +E +  +NR+IL+F +EAGI  KQYLPHYTT+EEW  HFGDKWG+F +RK  +DP  ILA G RIF+ +   S
Sbjct:  432 VEEILRRNRRILEFSEEAGIGLKQYLPHYTTREEWRSHFGDKWGEFVRRKSRYDPLAILAPGHRIFQKAVSYS 504          
BLAST of DN621618 vs. ExPASy Swiss-Prot
Match: CKX1_ARATH (Cytokinin dehydrogenase 1 OS=Arabidopsis thaliana GN=CKX1 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.665e-17
Identity = 38/67 (56.72%), Postives = 47/67 (70.15%), Query Frame = -1
Query:  508 LEYLNHQNRQILKFCDEAGIKAKQYLPHYTTQEEWVDHFGDKWGQFYQRKMEFDPRYILATGQRIFK 708
            LEYL  QN++++ FC  A +  KQYLPHY TQ+EW  HFG +W  F QRK  +DP  ILA GQRIF+
Sbjct:  474 LEYLLKQNQRVMNFCAAANLNVKQYLPHYETQKEWKSHFGKRWETFAQRKQAYDPLAILAPGQRIFQ 540          
BLAST of DN621618 vs. ExPASy Swiss-Prot
Match: CKX4_ARATH (Cytokinin dehydrogenase 4 OS=Arabidopsis thaliana GN=CKX4 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.777e-15
Identity = 36/76 (47.37%), Postives = 52/76 (68.42%), Query Frame = -1
Query:  511 SFGHGEEMQSLEYLNHQNRQILKFCDEAGIKAKQYLPHYTTQEEWVDHFGDKWGQFYQRKMEFDPRYILATGQRIF 738
            S G  +  Q LE LN +   +++FC+ +GIK K+YL HYT +E+WV HFG KW  F ++K+ FDP+ +L+ GQ IF
Sbjct:  451 SAGGSQNWQELENLNDK---VIQFCENSGIKIKEYLMHYTRKEDWVKHFGPKWDDFLRKKIMFDPKRLLSPGQDIF 523          
BLAST of DN621618 vs. ExPASy Swiss-Prot
Match: CKX2_ARATH (Cytokinin dehydrogenase 2 OS=Arabidopsis thaliana GN=CKX2 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 8.148e-15
Identity = 32/59 (54.24%), Postives = 46/59 (77.97%), Query Frame = -1
Query:  511 NRQILKFCDEAGIKAKQYLPHYTTQEEWVDHFGDKWGQFYQRKMEFDPRYILATGQRIF 687
            N +I++FC ++GIK KQYL HYT++E+W++HFG KW  F +RK  FDP+ +L+ GQ IF
Sbjct:  443 NEKIIRFCKDSGIKIKQYLMHYTSKEDWIEHFGSKWDDFSKRKDLFDPKKLLSPGQDIF 501          
BLAST of DN621618 vs. ExPASy Swiss-Prot
Match: CKX7_ARATH (Cytokinin dehydrogenase 7 OS=Arabidopsis thaliana GN=CKX7 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.064e-14
Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = -1
Query:  502 EMQSLEYLNHQNRQILKFCDEAGIKAKQYLPHYTTQEEWVDHFGDKWGQFYQRKMEFDPRYILATGQRIFKPS 720
            ++ S+E +  QN++I+ +C + GI  K YLPHY +QEEW+ HFG++W +F  RK  FDP  IL+ GQ+IF  S
Sbjct:  451 KVSSVEKMVAQNQEIVHWCVKNGIDYKLYLPHYKSQEEWIRHFGNRWSRFVDRKAMFDPMAILSPGQKIFNRS 523          
BLAST of DN621618 vs. ExPASy Swiss-Prot
Match: CKX3_ARATH (Cytokinin dehydrogenase 3 OS=Arabidopsis thaliana GN=CKX3 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.008e-14
Identity = 32/78 (41.03%), Postives = 51/78 (65.38%), Query Frame = -1
Query:  508 ISFGHGEEMQSLEYLNHQNRQILKFCDEAGIKAKQYLPHYTTQEEWVDHFGDKWGQFYQRKMEFDPRYILATGQRIFK 741
            + F       + E  + +N +ILKFC++A +   QYLP++++QE WV HFG +W  F +RK ++DP+ IL+ GQ IF+
Sbjct:  441 VGFLRSAGFDNWEAFDQENMEILKFCEDANMGVIQYLPYHSSQEGWVRHFGPRWNIFVERKYKYDPKMILSPGQNIFQ 518          
BLAST of DN621618 vs. ExPASy Swiss-Prot
Match: CKX1_MAIZE (Cytokinin dehydrogenase 1 OS=Zea mays GN=CKX1 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 6.456e-12
Identity = 33/67 (49.25%), Postives = 46/67 (68.66%), Query Frame = -1
Query:  511 LEYLNHQNRQILKFCDEAGIKAKQYLPHYTTQEEWVDHFG-DKWGQFYQRKMEFDPRYILATGQRIF 708
            L  L  QNR+IL+FCD AGI+ K YL  +T + +WV HFG  KW +F + K ++DP+ +L+ GQ IF
Sbjct:  467 LARLQEQNRRILRFCDLAGIQYKTYLARHTDRSDWVRHFGAAKWNRFVEMKNKYDPKRLLSPGQDIF 533          
The following BLAST results are available for this feature:
BLAST of DN621618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
CKX5_ARATH5.092e-2563.64Cytokinin dehydrogenase 5 OS=Arabidopsis thaliana ... [more]
CKX6_ARATH1.215e-1857.53Cytokinin dehydrogenase 6 OS=Arabidopsis thaliana ... [more]
CKX1_ARATH6.665e-1756.72Cytokinin dehydrogenase 1 OS=Arabidopsis thaliana ... [more]
CKX4_ARATH4.777e-1547.37Cytokinin dehydrogenase 4 OS=Arabidopsis thaliana ... [more]
CKX2_ARATH8.148e-1554.24Cytokinin dehydrogenase 2 OS=Arabidopsis thaliana ... [more]
CKX7_ARATH1.064e-1447.95Cytokinin dehydrogenase 7 OS=Arabidopsis thaliana ... [more]
CKX3_ARATH9.008e-1441.03Cytokinin dehydrogenase 3 OS=Arabidopsis thaliana ... [more]
CKX1_MAIZE6.456e-1249.25Cytokinin dehydrogenase 1 OS=Zea mays GN=CKX1 PE=1... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_06P09_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621618 ID=DN621618; Name=DN621618; organism=Citrus sinensis; type=EST; length=741bp
GTTATAAGTTAACTACCTTGATTATATTTACAAAGTTGTTCTCGTTCAGA
TGCAACTGCAAGGAACAAGGAGCTACTGATAATGATAGGGTGGGGTAAAA
TACTAACACAGTAAATCGCCAGACCAAACAGGATGGAACTGGAACCGGCT
GTGTGATGAAGCCTACAGACAAAATCCGGAGACAACAGTGGGCGGTCGGG
ATCACGGGCACTGCAATCAGCAACATGACATGTGCTGTCATTGATCATGG
ACCCCTGCAATCAAACACTAGTGCCTGTCTACCATCATATGATGACAATC
CCTCTGAGGCATGCGTCCATCCACTGTAATAAGGGGGAGAAAAAAACAAA
AAGAACCCACCTCTTGTCTCCCAGTAACATCAATTCAACATTTTATATTT
ACAACAATAAGAATATTTATATTCCTAAGACGGTGCGGTTTCAGTATCGT
GGTTTCTATTTTCTCGTAGTTCTATAAGGCCATATTAGAAGAAGATTGGA
AGGAGGGTTTGAAAATACGTTGGCCTGTGGCTAAAATGTATCTTGGATCA
AATTCCATTTTTCTTTGATAAAACTGACCCCACTTATCTCCAAAGTGGTC
CACCCACTCCTCTTGTGTAGTGTAGTGAGGCAAGTATTGTTTAGCTTTGA
TTCCCGCTTCATCACAGAACTTGAGGATCTGACGATTCTGATGGTTCAAG
TACTCCAAAGACTGCATCTCCTCACCATGTCCAAAGCTGAT
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