DN621612

Overview
NameDN621612
Unique NameDN621612
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3716 contig Csv1_Contig3716:224..927. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621612 vs. ExPASy Swiss-Prot
Match: UGPA_SOLTU (UTP--glucose-1-phosphate uridylyltransferase OS=Solanum tuberosum PE=1 SV=3)

HSP 1 Score: 343.584 bits (880), Expect = 6.157e-94
Identity = 165/217 (76.04%), Postives = 181/217 (83.41%), Query Frame = 2
Query:   53 DAEKLTQLKSAVAGLNQISENEKNGFINLVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSG*LDALISQGKEYVFAAN 703
            DAEKL  LKSAVAGLNQISENEK+GFINLV RYLSGEAQH++WSKIQTPTDE+VVPYD LAP+ EDPAE                    MGCTGPKSVIEVRNGLTFLDLIV QIE LNAK+GC+VPLLLMNSFNTHDDT KI+EKY+ SN++IHTFNQSQYPRL  +DF PLPCKG + KDGWYPPGHGDVFPSLMNSG LDAL+++GKEYVF AN
Sbjct:   11 DAEKLNNLKSAVAGLNQISENEKSGFINLVGRYLSGEAQHIDWSKIQTPTDEVVVPYDKLAPLSEDPAETKKLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVKQIEALNAKFGCSVPLLLMNSFNTHDDTLKIVEKYANSNIDIHTFNQSQYPRLVTEDFAPLPCKGNSGKDGWYPPGHGDVFPSLMNSGKLDALLAKGKEYVFVAN 227          
BLAST of DN621612 vs. ExPASy Swiss-Prot
Match: UGPA_ASTPN (UTP--glucose-1-phosphate uridylyltransferase OS=Astragalus penduliflorus GN=UGP PE=2 SV=1)

HSP 1 Score: 338.961 bits (868), Expect = 1.517e-92
Identity = 165/219 (75.34%), Postives = 180/219 (82.19%), Query Frame = 2
Query:   47 ATDAEKLTQLKSAVAGLNQISENEKNGFINLVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSG*LDALISQGKEYVFAAN 703
            AT  ++L+ LKS+VAGLNQISENEK+GFINLVARYLSGEAQHVEWSKIQTPTDE+VVPYD+LAP P+   E                    MGCTGPKSVIEVR+GLTFLDLIVIQIENLN+KYG NVPLLLMNSFNTHDDT  I+EKY  SN+EIHTFNQSQYPRL  DDF+PLP KG+TDKDGWYPPGHG +FPSL NSG LDALISQGKEYVF AN
Sbjct:    4 ATATDRLSNLKSSVAGLNQISENEKSGFINLVARYLSGEAQHVEWSKIQTPTDEVVVPYDTLAPTPDGSLEIKNLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRDGLTFLDLIVIQIENLNSKYGSNVPLLLMNSFNTHDDTQTIVEKYQNSNIEIHTFNQSQYPRLVVDDFLPLPSKGRTDKDGWYPPGHGSMFPSLSNSGKLDALISQGKEYVFVAN 222          
BLAST of DN621612 vs. ExPASy Swiss-Prot
Match: UGPA1_ARATH (UTP--glucose-1-phosphate uridylyltransferase 1 OS=Arabidopsis thaliana GN=At5g17310 PE=2 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 2.190e-91
Identity = 164/219 (74.89%), Postives = 180/219 (82.19%), Query Frame = 2
Query:   47 ATDAEKLTQLKSAVAGLNQISENEKNGFINLVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSG*LDALISQGKEYVFAAN 703
            AT  EKL QLKSAV GL ++SENEK+GFINLV+RYLSGEAQH+EWSKIQTPTDEIVVPYD +A V ED +E                    MGCTGPKSVIEVR+GLTFLDLIVIQIENLN KY C VPL+LMNSFNTHDDT KI+EKY+KSNV+IHTFNQS+YPR+ AD+FVP P KGKTDKDGWYPPGHGDVFPSLMNSG LDA +SQGKEYVF AN
Sbjct:    3 ATATEKLPQLKSAVDGLTEMSENEKSGFINLVSRYLSGEAQHIEWSKIQTPTDEIVVPYDKMANVSEDASETKYLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRDGLTFLDLIVIQIENLNNKYNCKVPLVLMNSFNTHDDTQKIVEKYTKSNVDIHTFNQSKYPRVVADEFVPWPSKGKTDKDGWYPPGHGDVFPSLMNSGKLDAFLSQGKEYVFIAN 221          
BLAST of DN621612 vs. ExPASy Swiss-Prot
Match: UGPA_PYRPY (UTP--glucose-1-phosphate uridylyltransferase OS=Pyrus pyrifolia PE=2 SV=1)

HSP 1 Score: 326.25 bits (835), Expect = 1.017e-88
Identity = 163/212 (76.89%), Postives = 173/212 (81.60%), Query Frame = 2
Query:   71 QLKSAVAGLNQISENEKNGFINLVARYLSGE-AQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSG*LDALISQGKEYVFAAN 703
            +LKS VA L+QISENEKNGFINLV+RY+SGE AQHVEWSKIQTPTDE+VVPYD LAP PEDP E                    MGCTGPKSVIEVRNGLTFLDLIVIQIENLN KYG  VPLLLMNSFNTHDDT KI+EKYSKSNV+IHTFNQSQYPRL  +DF PLP KG+T KDGWYPPGHGDVFPSL NSG LD L+SQGKEYVF AN
Sbjct:   11 KLKSDVASLSQISENEKNGFINLVSRYVSGEEAQHVEWSKIQTPTDEVVVPYDGLAPTPEDPEEIKKLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENLNNKYGSCVPLLLMNSFNTHDDTQKIVEKYSKSNVQIHTFNQSQYPRLVVEDFSPLPSKGQTGKDGWYPPGHGDVFPSLKNSGKLDLLLSQGKEYVFIAN 222          
BLAST of DN621612 vs. ExPASy Swiss-Prot
Match: UGPA2_ARATH (Probable UTP--glucose-1-phosphate uridylyltransferase 2 OS=Arabidopsis thaliana GN=At3g03250 PE=1 SV=1)

HSP 1 Score: 325.865 bits (834), Expect = 1.329e-88
Identity = 157/220 (71.36%), Postives = 178/220 (80.91%), Query Frame = 2
Query:   44 MATDAEKLTQLKSAVAGLNQISENEKNGFINLVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSG*LDALISQGKEYVFAAN 703
            MA   E L QLKSAV GL ++SE+EK+GFI+LV+RYLSGEAQH+EWSKIQTPTDEIVVPY+ + PV +D AE                    MGCTGPKSVIEVR+GLTFLDLIVIQIENLN KYGC VPL+LMNSFNTHDDT KI+EKY+ SNV+IHTFNQS+YPR+ AD+FVP P KGKTDK+GWYPPGHGDVFP+LMNSG LD  +SQGKEYVF AN
Sbjct:    1 MAATTENLPQLKSAVDGLTEMSESEKSGFISLVSRYLSGEAQHIEWSKIQTPTDEIVVPYEKMTPVSQDVAETKNLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRDGLTFLDLIVIQIENLNNKYGCKVPLVLMNSFNTHDDTHKIVEKYTNSNVDIHTFNQSKYPRVVADEFVPWPSKGKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQGKEYVFVAN 220          
BLAST of DN621612 vs. ExPASy Swiss-Prot
Match: UGPA_MUSAC (UTP--glucose-1-phosphate uridylyltransferase OS=Musa acuminata GN=UGPA PE=2 SV=1)

HSP 1 Score: 323.553 bits (828), Expect = 6.594e-88
Identity = 157/214 (73.36%), Postives = 174/214 (81.31%), Query Frame = 2
Query:   62 KLTQLKSAVAGLNQISENEKNGFINLVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSG*LDALISQGKEYVFAAN 703
            K+ +L+SAVA LNQISENEK+GFI+LV+RYLSGEA+ +EWSKIQTPTDE+VVPYD+L+P PED                       MGCTGPKSVIEVRNG TFLDLIVIQIE+LN KYGCNVPLLLMNSFNTHDDT KI+EKY+ SN+EIHTFNQSQYPRL  +DF PLP KG   KDGWYPPGHGDVFPSLMNSG LDAL+SQGKEYVF AN
Sbjct:    5 KIAKLQSAVAELNQISENEKSGFISLVSRYLSGEAEQIEWSKIQTPTDEVVVPYDTLSPPPEDLEATKKLLDKLAVLKLNGGLGTTMGCTGPKSVIEVRNGFTFLDLIVIQIESLNKKYGCNVPLLLMNSFNTHDDTQKIVEKYANSNIEIHTFNQSQYPRLVMEDFQPLPSKGHAGKDGWYPPGHGDVFPSLMNSGKLDALLSQGKEYVFIAN 218          
BLAST of DN621612 vs. ExPASy Swiss-Prot
Match: UGPA_HORVU (UTP--glucose-1-phosphate uridylyltransferase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 1.375e-85
Identity = 153/214 (71.50%), Postives = 171/214 (79.91%), Query Frame = 2
Query:   62 KLTQLKSAVAGLNQISENEKNGFINLVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSG*LDALISQGKEYVFAAN 703
            K+  L+ AVA L +ISENEK GFI+LV+RYLSGEA+ +EWSKIQTPTDE+VVPYD+LAP PED                       MGCTGPKSVIEVRNG TFLDLIVIQIE+LN KYGC+VPLLLMNSFNTHDDT KI+EKYS SN+EIHTFNQSQYPR+  +DF+PLP KG+T KDGWYPPGHGDVFPSL NSG LD L+SQGKEYVF AN
Sbjct:   11 KIDGLRDAVAKLGEISENEKAGFISLVSRYLSGEAEQIEWSKIQTPTDEVVVPYDTLAPPPEDLDAMKALLDKLVVLKLNGGLGTTMGCTGPKSVIEVRNGFTFLDLIVIQIESLNKKYGCSVPLLLMNSFNTHDDTQKIVEKYSNSNIEIHTFNQSQYPRIVTEDFLPLPSKGQTGKDGWYPPGHGDVFPSLNNSGKLDTLLSQGKEYVFVAN 224          
BLAST of DN621612 vs. ExPASy Swiss-Prot
Match: UGPA2_DICDI (UTP--glucose-1-phosphate uridylyltransferase 2 OS=Dictyostelium discoideum GN=ugpB PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 9.015e-45
Identity = 98/238 (41.18%), Postives = 136/238 (57.14%), Query Frame = 2
Query:   20 PRLDRINHMATDAEKLTQLKSAVAGLNQISENE--KNGFIN--------LVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSG*LDALISQGKEYVFAAN 703
            P+L      ++D          +  ++Q + NE  KN F+N        L  R+L    + ++W KI  P  ++V+ Y  L  + E                        MGCTGPKSVIEVR+  TFLDL V QI+ +N +Y   VPL+LMNSFNTH +T KII+KY  S+V+IH+FNQS++PR+  D+ +P+P K       WYPPGHGDVF +L NSG L+ LI++GKEY+F +N
Sbjct:   14 PQLQAFGSRSSDLATEDLFLKKLEAISQTAPNETVKNEFLNKEIPSINKLFTRFLKNRKKVIDWDKINPPPADMVLNYKDLPAITEQRTSELASKLAVLKLNGGLGTT--MGCTGPKSVIEVRSEKTFLDLSVQQIKEMNERYNIKVPLVLMNSFNTHQETGKIIQKYKYSDVKIHSFNQSRFPRILKDNLMPVPDKLFGSDSEWYPPGHGDVFFALQNSGLLETLINEGKEYLFISN 249          
BLAST of DN621612 vs. ExPASy Swiss-Prot
Match: UGPA1_YEAST (UTP--glucose-1-phosphate uridylyltransferase OS=Saccharomyces cerevisiae GN=UGP1 PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.844e-44
Identity = 94/200 (47.00%), Postives = 125/200 (62.50%), Query Frame = 2
Query:  110 ENEKNGFINLVARYLSGEAQH--VEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSG*LDALISQGKEYVFAAN 703
            ENE + F  L  RYL  ++    +EW KI++P  + VV Y+ ++  PE+ +                     MGC GPKSVIEVR G TFLDL V QIE LN +Y  +VPLLLMNSFNT  DT  +I+KYS + + I +FNQS++PR+  D  +P+P +  +  D WYPPGHGD+F SL  SG LDALI+QG+E +F +N
Sbjct:   49 ENELDSFFTLFRRYLVEKSSRTTLEWDKIKSPNPDEVVKYEIISQQPENVSNLSKLAVLKLNGGLGTS----MGCVGPKSVIEVREGNTFLDLSVRQIEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKKYSANRIRIRSFNQSRFPRVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSN 244          
BLAST of DN621612 vs. ExPASy Swiss-Prot
Match: UGPA1_SCHPO (Probable UTP--glucose-1-phosphate uridylyltransferase OS=Schizosaccharomyces pombe GN=SPCC1322.04 PE=1 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 1.302e-43
Identity = 94/227 (41.41%), Postives = 134/227 (59.03%), Query Frame = 2
Query:   29 DRINHMATDAEKLTQLKSAVAGLNQISENEKNGFINLVARYLSGEAQ--HVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSG*LDALISQGKEYVFAAN 703
            + +NH+A+  +     K+         + E + F +L +RYL  +A+   + W  +++P  E VV YD++    E                        MGC GPKS+IEVR+G +FLDL V QIE+LN KY  NVP +LMNSFNT + T+K+I+KY    ++I TFNQS+YPR+  +  +P+P    +  D WYPPGHGDVF +L NSG +D LI+QGKEY+F +N
Sbjct:   35 NELNHLASTVKDPLAKKAF--------QKEMDNFFSLFSRYLQEDARGSEINWDLVESPKPEQVVEYDTIT---EAGGLSRDYLNKLAVLKLNGGLGTTMGCVGPKSIIEVRDGNSFLDLSVRQIEHLNRKYNVNVPFVLMNSFNTDEATAKVIKKYEAHKIDILTFNQSRYPRVHKETLLPVPHTADSAIDEWYPPGHGDVFEALTNSGIIDTLIAQGKEYLFVSN 250          
The following BLAST results are available for this feature:
BLAST of DN621612 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
UGPA_SOLTU6.157e-9476.04UTP--glucose-1-phosphate uridylyltransferase OS=So... [more]
UGPA_ASTPN1.517e-9275.34UTP--glucose-1-phosphate uridylyltransferase OS=As... [more]
UGPA1_ARATH2.190e-9174.89UTP--glucose-1-phosphate uridylyltransferase 1 OS=... [more]
UGPA_PYRPY1.017e-8876.89UTP--glucose-1-phosphate uridylyltransferase OS=Py... [more]
UGPA2_ARATH1.329e-8871.36Probable UTP--glucose-1-phosphate uridylyltransfer... [more]
UGPA_MUSAC6.594e-8873.36UTP--glucose-1-phosphate uridylyltransferase OS=Mu... [more]
UGPA_HORVU1.375e-8571.50UTP--glucose-1-phosphate uridylyltransferase OS=Ho... [more]
UGPA2_DICDI9.015e-4541.18UTP--glucose-1-phosphate uridylyltransferase 2 OS=... [more]
UGPA1_YEAST5.844e-4447.00UTP--glucose-1-phosphate uridylyltransferase OS=Sa... [more]
UGPA1_SCHPO1.302e-4341.41Probable UTP--glucose-1-phosphate uridylyltransfer... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06P06_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621612 ID=DN621612; Name=DN621612; organism=Citrus sinensis; type=EST; length=704bp
GTTCTTCTAGATTCATCTTCCTCGTTTAGACCGAATCAATCACATGGCCA
CTGACGCCGAGAAGCTCACTCAGCTCAAATCTGCCGTTGCTGGCCTCAAT
CAAATCAGTGAAAATGAGAAAAATGGATTCATCAACCTCGTTGCTCGCTA
TCTAAGCGGCGAAGCGCAACACGTGGAATGGAGCAAAATCCAAACGCCTA
CTGATGAAATCGTAGTTCCTTATGACAGCTTGGCACCAGTTCCTGAAGAT
CCAGCGGAAACCAAAAAGCTTTTGGATAAGCTTGTCGTGTTGAAGCTCAA
TGGAGGTTTGGGAACCACAATGGGCTGCACTGGTCCCAAGTCTGTTATTG
AAGTTCGTAACGGGTTGACATTTCTTGACCTCATCGTCATCCAGATTGAG
AATCTCAATGCTAAATATGGATGTAATGTTCCCCTGCTACTCATGAACTC
GTTCAACACGCATGATGATACATCGAAGATTATAGAGAAGTACTCCAAAT
CAAATGTCGAGATTCATACTTTTAACCAGAGCCAGTATCCTCGATTGTGT
GCCGATGATTTTGTGCCCTTACCATGCAAAGGGAAGACTGACAAGGATGG
ATGGTATCCTCCTGGCCACGGTGATGTCTTCCCATCCTTAATGAACAGCG
GCTAGCTTGACGCTTTAATTTCTCAGGGCAAAGAGTATGTATTTGCTGCC
AACT
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