CX052836
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX052836 vs. ExPASy Swiss-Prot
Match: RHN1_NICPL (Ras-related protein RHN1 OS=Nicotiana plumbaginifolia GN=RHN1 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 2.015e-54 Identity = 106/172 (61.63%), Postives = 134/172 (77.91%), Query Frame = 3 Query: 216 SSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 731 SS NL KLVLLGD G GKS +V+RFV+GQF + T+GA+F S T+A+ ++T VKFEIWDTAGQERY +LAP+YYRG YDITS DSF +A+ WV+ELQK G+P++VMAL GNKADL ++R+V A++ YAE+NG+FF+ETSAKTA N+N +F EIAKRLPR Sbjct: 3 SSSHNNLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTLAVNNAT-VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFARAKKWVQELQKQGNPNMVMALAGNKADLEDRRKVTAEEARLYAEENGLFFMETSAKTAVNVNAIFYEIAKRLPR 173
BLAST of CX052836 vs. ExPASy Swiss-Prot
Match: RAB5_TOBAC (Ras-related protein Rab5 OS=Nicotiana tabacum GN=RAB5 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 4.963e-53 Identity = 102/167 (61.08%), Postives = 131/167 (78.44%), Query Frame = 3 Query: 231 NLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 731 NL KLVLLGD G GKS +V+RFV+GQF + T+GA+F S T+++ ++T VKFEIWDTAGQERY +LAP+YYRG YDITS +S +A+ WV+ELQK G+P++VMAL GNKADL +KR+V A++ YAE+NG+FF+ETSAKTA N+N +F EIAKRLPR Sbjct: 8 NLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTVSVNNAT-VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESLARAKKWVQELQKQGNPNMVMALAGNKADLEDKRKVTAEEARLYAEENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
BLAST of CX052836 vs. ExPASy Swiss-Prot
Match: RAB5A_DICDI (Ras-related protein Rab-5A OS=Dictyostelium discoideum GN=rab5A PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.222e-51 Identity = 102/172 (59.30%), Postives = 130/172 (75.58%), Query Frame = 3 Query: 216 SSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 731 +++ K + KLVLLG++ VGKS +VLRFVRG F + T+GA+FL+QT+ L D TTVKFEIWDTAGQERY LAP+YYRG YDI S DSF +A WVKELQ+ GSP+IV+AL GNK DL KR+V + +YAE+NG+ F+ETSAKT+ N+N+LF EIAK+LP+ Sbjct: 2 NNNNKIFQFKLVLLGEAAVGKSSLVLRFVRGHFLDYQESTIGAAFLAQTVCLND-TTVKFEIWDTAGQERYHTLAPMYYRGAQAAIVVYDIRSEDSFERAIKWVKELQRQGSPNIVIALAGNKLDLAAKRKVETAEAQQYAEENGLLFMETSAKTSQNVNELFVEIAKKLPK 172
BLAST of CX052836 vs. ExPASy Swiss-Prot
Match: RAB5C_BOVIN (Ras-related protein Rab-5C OS=Bos taurus GN=RAB5C PE=2 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 4.645e-51 Identity = 102/175 (58.29%), Postives = 130/175 (74.29%), Query Frame = 3 Query: 207 NAGSSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 731 N ++ K + KLVLLG+S VGKS +VLRFV+GQF + T+GA+FL+QT+ L D TTVKFEIWDTAGQERY +LAP+YYRG YDIT+ D+F +A+ WVKELQ+ SP+IV+AL GNKADL KR V Q+ YAE N + F+ETSAKTA N+N++F IAK+LP+ Sbjct: 11 NGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDD-TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAKKLPK 184
BLAST of CX052836 vs. ExPASy Swiss-Prot
Match: RHA1_ARATH (Ras-related protein RHA1 OS=Arabidopsis thaliana GN=RHA1 PE=1 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 6.067e-51 Identity = 101/172 (58.72%), Postives = 130/172 (75.58%), Query Frame = 3 Query: 216 SSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 731 SS KN+ KLVLLGD G GKS +VLRFV+ QF + T+GA+F SQT+A+ D+T VKFEIWDTAGQERY +LAP+YYRG +DIT+ SF +A+ WV+ELQ G+P++VMAL GNKADL + R+V A++ YA++N +FF+ETSAKTA N+ +F EIAKRLPR Sbjct: 3 SSGNKNINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVSAEEAEIYAQENSLFFMETSAKTATNVKDIFYEIAKRLPR 173
BLAST of CX052836 vs. ExPASy Swiss-Prot
Match: RAB5C_CHICK (Ras-related protein Rab-5C OS=Gallus gallus GN=RAB5C PE=1 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 6.067e-51 Identity = 102/175 (58.29%), Postives = 130/175 (74.29%), Query Frame = 3 Query: 207 NAGSSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 731 N ++ K + KLVLLG+S VGKS +VLRFV+GQF + T+GA+FL+QT+ L D TTVKFEIWDTAGQERY +LAP+YYRG YDIT+ D+F +A+ WVKELQ+ SP+IV+AL GNKADL KR V QD YA+ N + F+ETSAKTA N+N++F IAK+LP+ Sbjct: 11 NGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDD-TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQRQASPNIVIALAGNKADLATKRAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPK 184
BLAST of CX052836 vs. ExPASy Swiss-Prot
Match: RAB5C_PONAB (Ras-related protein Rab-5C OS=Pongo abelii GN=RAB5C PE=2 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.035e-50 Identity = 101/175 (57.71%), Postives = 130/175 (74.29%), Query Frame = 3 Query: 207 NAGSSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 731 N ++ K + KLVLLG+S VGKS +VLRFV+GQF + T+GA+FL+QT+ L D TTVKFEIWDTAGQERY +LAP+YYRG YDIT+ D+F +A+ WVKELQ+ SP+IV+AL GNKADL KR V Q+ YA+ N + F+ETSAKTA N+N++F IAK+LP+ Sbjct: 11 NGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDD-TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPK 184
BLAST of CX052836 vs. ExPASy Swiss-Prot
Match: RAB5C_MOUSE (Ras-related protein Rab-5C OS=Mus musculus GN=Rab5c PE=1 SV=2) HSP 1 Score: 200.29 bits (508), Expect = 1.035e-50 Identity = 101/175 (57.71%), Postives = 130/175 (74.29%), Query Frame = 3 Query: 207 NAGSSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 731 N ++ K + KLVLLG+S VGKS +VLRFV+GQF + T+GA+FL+QT+ L D TTVKFEIWDTAGQERY +LAP+YYRG YDIT+ D+F +A+ WVKELQ+ SP+IV+AL GNKADL KR V Q+ YA+ N + F+ETSAKTA N+N++F IAK+LP+ Sbjct: 11 NGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDD-TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPK 184
BLAST of CX052836 vs. ExPASy Swiss-Prot
Match: RAB5C_HUMAN (Ras-related protein Rab-5C OS=Homo sapiens GN=RAB5C PE=1 SV=2) HSP 1 Score: 200.29 bits (508), Expect = 1.035e-50 Identity = 101/175 (57.71%), Postives = 130/175 (74.29%), Query Frame = 3 Query: 207 NAGSSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 731 N ++ K + KLVLLG+S VGKS +VLRFV+GQF + T+GA+FL+QT+ L D TTVKFEIWDTAGQERY +LAP+YYRG YDIT+ D+F +A+ WVKELQ+ SP+IV+AL GNKADL KR V Q+ YA+ N + F+ETSAKTA N+N++F IAK+LP+ Sbjct: 11 NGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDD-TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPK 184
BLAST of CX052836 vs. ExPASy Swiss-Prot
Match: RAB5C_CANFA (Ras-related protein Rab-5C OS=Canis familiaris GN=RAB5C PE=2 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.035e-50 Identity = 101/175 (57.71%), Postives = 130/175 (74.29%), Query Frame = 3 Query: 207 NAGSSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 731 N ++ K + KLVLLG+S VGKS +VLRFV+GQF + T+GA+FL+QT+ L D TTVKFEIWDTAGQERY +LAP+YYRG YDIT+ D+F +A+ WVKELQ+ SP+IV+AL GNKADL KR V Q+ YA+ N + F+ETSAKTA N+N++F IAK+LP+ Sbjct: 11 NGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDD-TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPK 184 The following BLAST results are available for this feature:
BLAST of CX052836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX052836 ID=CX052836; Name=CX052836; organism=Citrus sinensis; type=EST; length=799bpback to top |