CX052834

Overview
NameCX052834
Unique NameCX052834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX052834 vs. ExPASy Swiss-Prot
Match: PMA10_ARATH (ATPase 10, plasma membrane-type OS=Arabidopsis thaliana GN=AHA10 PE=2 SV=2)

HSP 1 Score: 250.366 bits (638), Expect = 9.534e-66
Identity = 127/217 (58.53%), Postives = 152/217 (70.05%), Query Frame = 2
Query:    2 WVVVDTDFFETHFHVKXXXXXXXXXXXALYLQVSIISQALIFVTRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLIGTDLEFNGRKSRPSLXXXXXXXXXXXXXLGEIHTLRGHVESVVRLKNLDLNVIQAAHTV 652
            W++V T FFE HFHVK           A+YLQVSIISQALIFVTRS+ WSF ERPG LL+ AF++AQL ATLIAVYA+ISFA I+G+GW WAGVIWLYS +FYIPLDVIKF+  YALSGEAWNLV DRKTAFT KKDYGK+D +    +S RS         E  G +SR S              L E+H++  H+ESV++LK +D  +I+AAHTV
Sbjct:  736 WIIVSTTFFEKHFHVKSIANNSEQVSSAMYLQVSIISQALIFVTRSRGWSFFERPGTLLIFAFILAQLAATLIAVYANISFAKITGIGWRWAGVIWLYSLIFYIPLDVIKFVFHYALSGEAWNLVLDRKTAFTYKKDYGKDDGSPNVTISQRSRSA-----EELRGSRSRASWIAEQTRRRAEIARLLEVHSVSRHLESVIKLKQIDQRMIRAAHTV 947          
BLAST of CX052834 vs. ExPASy Swiss-Prot
Match: PMA4_NICPL (Plasma membrane ATPase 4 OS=Nicotiana plumbaginifolia GN=PMA4 PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 2.124e-65
Identity = 131/222 (59.01%), Postives = 157/222 (70.72%), Query Frame = 2
Query:    2 WVVVDTDFFETHFHVKXXXXXXXXXXXALYLQVSIISQALIFVTRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGL---IGTDLEFNGRKSRPSL--XXXXXXXXXXXXXLGEIHTLRGHVESVVRLKNLDLNVIQAAHTV 652
            W + DTDFF   F VK           ALYLQVSIISQALIFVTRS+SWSFLERPG LL+ AF++AQLVATLIAVYA+ +FA + G GWGWAGVIWLYS +FY+PLD++KF +RY LSG+AWN + D KTAFT+KKDYGKE+R AQW L+ R+L GL     T+L FN + S   L               L E+HTL+GHVESVV+LK LD+  IQ  +TV
Sbjct:  732 WAMHDTDFFSDKFGVKSLRNSDEEMMSALYLQVSIISQALIFVTRSRSWSFLERPGMLLVIAFMIAQLVATLIAVYANWAFARVKGCGWGWAGVIWLYSIIFYLPLDIMKFAIRYILSGKAWNNLLDNKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPEATNL-FNEKNSYRELSEIAEQAKRRAEMARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 952          
BLAST of CX052834 vs. ExPASy Swiss-Prot
Match: PMA8_ARATH (ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=AHA8 PE=1 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 8.071e-65
Identity = 125/217 (57.60%), Postives = 155/217 (71.43%), Query Frame = 2
Query:    2 WVVVDTDFFETHFHVKXXXXXXXXXXXALYLQVSIISQALIFVTRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLIGTDLEFNGRKSRPSLXXXXXXXXXXXXXLGEIHTLRGHVESVVRLKNLDLNVIQAAHTV 652
            W+  DTDFF   F V+           ALYLQVSIISQALIFVTRS+SWSF+ERPG LL+ AFV+AQLVATLIAVYA+  FA I G GWGWAG IW+YS + YIPLD++KFI+RYAL+G+AW+ + ++KTAFT+KKDYGK +R AQW L+ R+L GL   +  FN  K+  S              L E+HTL+GHVESVV+LK LD++ IQ  +TV
Sbjct:  732 WLAHDTDFFSKTFGVRSIQGNEEELMAALYLQVSIISQALIFVTRSRSWSFVERPGFLLLIAFVIAQLVATLIAVYANWGFARIVGCGWGWAGGIWVYSIITYIPLDILKFIIRYALTGKAWDNMINQKTAFTTKKDYGKGEREAQWALAQRTLHGLPPPEAMFNDNKNELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 948          
BLAST of CX052834 vs. ExPASy Swiss-Prot
Match: PMA11_ARATH (ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=AHA11 PE=1 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.425e-61
Identity = 124/224 (55.36%), Postives = 152/224 (67.86%), Query Frame = 2
Query:    2 WVVVDTDFFETHFHV----KXXXXXXXXXXXALYLQVSIISQALIFVTRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLIGTDLEFNGRK---SRPSLXXXXXXXXXXXXXLGEIHTLRGHVESVVRLKNLDLNVIQAAHTV 652
            W    TDFF   F V    K           A+YLQVSIISQALIFVTRS+SWS++ERPG LL+ AF++AQLVATLIAVYA+ SFA I G+GWGWAGVIWLY+ VFYIPLD+IKF++RYALSG AW+LV +++ AFT +KD+GKE R  QW  + R+L GL   D +    +   +  S              L E+HTL+GHVESVVRLK LD+  IQ A+TV
Sbjct:  733 WAAYKTDFFPRTFGVSTLEKTAHDDFRKLASAIYLQVSIISQALIFVTRSRSWSYVERPGMLLVVAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIVFYIPLDIIKFLIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDAKMFPERTHFNELSQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 956          
BLAST of CX052834 vs. ExPASy Swiss-Prot
Match: PMA4_ARATH (ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=AHA4 PE=1 SV=2)

HSP 1 Score: 236.113 bits (601), Expect = 1.861e-61
Identity = 127/224 (56.70%), Postives = 151/224 (67.41%), Query Frame = 2
Query:    2 WVVVDTDFFETHFHV----KXXXXXXXXXXXALYLQVSIISQALIFVTRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLIGTDLE-FNGRK--SRPSLXXXXXXXXXXXXXLGEIHTLRGHVESVVRLKNLDLNVIQAAHTV 652
            WV   TDFF   F V    K           A+YLQVSIISQALIFVTRS+SWSF+ERPG  LM AF++AQLVATLIAVYA+ SFA I G+GWGWAGVIWLY+ +FYIPLD IKF +RYALSG AW+LV +++ AFT +KD+GKE R  QW  + R+L GL   D + F  R   S  +              L E+HTL+GHVESVVRLK LD+  IQ A+TV
Sbjct:  737 WVSYKTDFFPRTFGVATLEKTAHDDFRKLASAIYLQVSIISQALIFVTRSRSWSFVERPGIFLMIAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYIPLDFIKFFIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDTKMFTDRTHVSELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 960          
BLAST of CX052834 vs. ExPASy Swiss-Prot
Match: PMA5_ARATH (ATPase 5, plasma membrane-type OS=Arabidopsis thaliana GN=AHA5 PE=2 SV=3)

HSP 1 Score: 235.343 bits (599), Expect = 3.174e-61
Identity = 125/221 (56.56%), Postives = 153/221 (69.23%), Query Frame = 2
Query:    2 WVVVDTDFFETHFHVKXXXXXXXXXXXALYLQVSIISQALIFVTRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLIGTDLE--FNGRKSRPSL--XXXXXXXXXXXXXLGEIHTLRGHVESVVRLKNLDLNVIQAAHTV 652
            WV+ D+DFF  +F V+           ALYLQVSIISQALIFVTRS+SWS+ E PG LL+ AFV+AQLVAT IAVYA+ SFA I G GWGWAGVIWLYSF+ YIPLD++KF +RY LSG+AW  + + KTAFT+KKDYGKE+R AQW  + R+L GL   +    FN + S   L               L EI+TL+GHVESVV+LK LD++ IQ  +TV
Sbjct:  729 WVMKDSDFFSNYFGVRPLSQRPEQMMAALYLQVSIISQALIFVTRSRSWSYAECPGLLLLGAFVIAQLVATFIAVYANWSFARIEGAGWGWAGVIWLYSFLTYIPLDLLKFGIRYVLSGKAWLNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPAEKNNIFNEKNSYSELSQIAEQAKRRAEVVRLREINTLKGHVESVVKLKGLDIDTIQQHYTV 949          
BLAST of CX052834 vs. ExPASy Swiss-Prot
Match: PMA1_NICPL (Plasma membrane ATPase 1 OS=Nicotiana plumbaginifolia GN=PMA1 PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 3.174e-61
Identity = 125/224 (55.80%), Postives = 151/224 (67.41%), Query Frame = 2
Query:    2 WVVVDTDFFETHFHV----KXXXXXXXXXXXALYLQVSIISQALIFVTRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLIGTDLEFNGRK---SRPSLXXXXXXXXXXXXXLGEIHTLRGHVESVVRLKNLDLNVIQAAHTV 652
            W    T+FF   F V    K           A+YLQVSIISQALIFVTRS+SWSF+ERPG LL+ AFV+AQLVATLIAVYA+ SFA I G+GWGWAGVIW+Y+ VFYIPLD+IKF +RYALSG AW+LVF+R+ AFT KKD+GKE R  QW  + R+L GL   D +        +  +              L E+HTL+GHVESVV+LK LD+  IQ A+TV
Sbjct:  734 WAAYKTNFFPHVFGVSTLEKTATDDFRKLASAIYLQVSIISQALIFVTRSRSWSFVERPGFLLVIAFVIAQLVATLIAVYANWSFAAIEGIGWGWAGVIWIYNLVFYIPLDIIKFFIRYALSGRAWDLVFERRIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDTKLFSEATNFNELNQLAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETIQQAYTV 957          
BLAST of CX052834 vs. ExPASy Swiss-Prot
Match: PMA9_ARATH (ATPase 9, plasma membrane-type OS=Arabidopsis thaliana GN=AHA9 PE=2 SV=2)

HSP 1 Score: 231.491 bits (589), Expect = 4.583e-60
Identity = 121/221 (54.75%), Postives = 149/221 (67.42%), Query Frame = 2
Query:    2 WVVVDTDFFETHFHVKXXXXXXXXXXXALYLQVSIISQALIFVTRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGL--IGTDLEFNGRKSRPSL--XXXXXXXXXXXXXLGEIHTLRGHVESVVRLKNLDLNVIQAAHTV 652
            W    TDFF   F V+           A+YLQVSI+SQALIFVTRS+SWS++ERPG  L+ AF +AQL+ATLIAVYA+ +FA I G+GWGWAGVIWLYS VFYIPLD++KFI+RY+LSG AW+ V + KTAFTSKKDYGK +R AQW  + R+L GL    T   FN + +   L               L E HTL+GHVESVV+ K LD+  IQ  +T+
Sbjct:  734 WAAESTDFFSAKFGVRSISGNPHELTAAVYLQVSIVSQALIFVTRSRSWSYVERPGFWLISAFFMAQLIATLIAVYANWNFARIRGIGWGWAGVIWLYSIVFYIPLDILKFIIRYSLSGRAWDNVIENKTAFTSKKDYGKGEREAQWAQAQRTLHGLQPAQTSDMFNDKSTYRELSEIADQAKRRAEVARLRERHTLKGHVESVVKQKGLDIEAIQQHYTL 954          
BLAST of CX052834 vs. ExPASy Swiss-Prot
Match: PMA1_ORYSJ (Plasma membrane ATPase OS=Oryza sativa subsp. japonica GN=Os04g0656100 PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 4.583e-60
Identity = 118/223 (52.91%), Postives = 151/223 (67.71%), Query Frame = 2
Query:    2 WVVVDTDFFETHFHVKXXXXXXXXXXXALYLQVSIISQALIFVTRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGL----IGTDLEFNGRKSRPSL--XXXXXXXXXXXXXLGEIHTLRGHVESVVRLKNLDLNVIQAAHTV 652
            W +  TDFF   F V+           ALYLQVSI+SQALIFVTRS+SWSF+ERPG LL+ AF++AQLVAT +AVYA+  FA I G+GWGWAGVIWLYS VFY PLD+ KF +R+ LSG AW+ + + K AFT+KKDYG+E+R AQW  + R+L GL    + ++  FN + S   L               L E++TL+GHVESVV+LK LD++ IQ  +TV
Sbjct:  729 WAMHKTDFFTDKFGVRSIRNSEHEMMSALYLQVSIVSQALIFVTRSRSWSFIERPGLLLVTAFMLAQLVATFLAVYANWGFARIKGIGWGWAGVIWLYSIVFYFPLDIFKFFIRFVLSGRAWDNLLENKIAFTTKKDYGREEREAQWATAQRTLHGLQPPEVASNTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTIQQNYTV 951          
BLAST of CX052834 vs. ExPASy Swiss-Prot
Match: PMA6_ARATH (ATPase 6, plasma membrane-type OS=Arabidopsis thaliana GN=AHA6 PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 5.986e-60
Identity = 118/219 (53.88%), Postives = 145/219 (66.21%), Query Frame = 2
Query:    2 WVVVDTDFFETHFHVKXXXXXXXXXXXALYLQVSIISQALIFVTRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLIGTDLEFNGRKSRPSL--XXXXXXXXXXXXXLGEIHTLRGHVESVVRLKNLDLNVIQAAHTV 652
            W+  DT FF   F V+            LYLQVSIISQALIFVTRS+SWSF+ERPG LL+ AF VAQL+ATLIA YAH  FA I G GWGW GVIW+YS V YIPLD++KFI RY LSG+AWN + + +TAFT+KKDYG+ +R AQW L+ R+L GL   +  F    +   L               L E+HTL+GHVESVV+LK LD++ +   +TV
Sbjct:  731 WLAHDTTFFSDKFGVRSLQGKDEELIAVLYLQVSIISQALIFVTRSRSWSFVERPGLLLLIAFFVAQLIATLIATYAHWEFARIKGCGWGWCGVIWIYSIVTYIPLDILKFITRYTLSGKAWNNMIENRTAFTTKKDYGRGEREAQWALAQRTLHGLKPPESMFEDTATYTELSEIAEQAKKRAEVARLREVHTLKGHVESVVKLKGLDIDNLNQHYTV 949          
The following BLAST results are available for this feature:
BLAST of CX052834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
PMA10_ARATH9.534e-6658.53ATPase 10, plasma membrane-type OS=Arabidopsis tha... [more]
PMA4_NICPL2.124e-6559.01Plasma membrane ATPase 4 OS=Nicotiana plumbaginifo... [more]
PMA8_ARATH8.071e-6557.60ATPase 8, plasma membrane-type OS=Arabidopsis thal... [more]
PMA11_ARATH1.425e-6155.36ATPase 11, plasma membrane-type OS=Arabidopsis tha... [more]
PMA4_ARATH1.861e-6156.70ATPase 4, plasma membrane-type OS=Arabidopsis thal... [more]
PMA5_ARATH3.174e-6156.56ATPase 5, plasma membrane-type OS=Arabidopsis thal... [more]
PMA1_NICPL3.174e-6155.80Plasma membrane ATPase 1 OS=Nicotiana plumbaginifo... [more]
PMA9_ARATH4.583e-6054.75ATPase 9, plasma membrane-type OS=Arabidopsis thal... [more]
PMA1_ORYSJ4.583e-6052.91Plasma membrane ATPase OS=Oryza sativa subsp. japo... [more]
PMA6_ARATH5.986e-6053.88ATPase 6, plasma membrane-type OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_48C11_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-48C11-E21-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX052834 ID=CX052834; Name=CX052834; organism=Citrus sinensis; type=EST; length=839bp
CTGGGTTGTAGTTGATACCGATTTCTTTGAGACACACTTTCATGTAAAGT
CCTTATCCAGCAATTCTGAGGAAGTTTCATCTGCTTTATATCTTCAAGTC
AGCATCATAAGCCAAGCTCTCATATTTGTTACAAGAAGTCAGAGTTGGTC
ATTTTTAGAGAGGCCTGGAGCTCTGTTGATGTGTGCATTTGTGGTGGCTC
AACTGGTGGCTACCTTAATTGCCGTCTATGCACATATTAGCTTTGCTTAT
ATTAGTGGCGTTGGATGGGGATGGGCCGGTGTCATATGGTTATACAGCTT
CGTTTTTTATATACCATTGGACGTCATTAAGTTCATTGTTCGCTATGCCT
TAAGTGGAGAAGCCTGGAATCTCGTATTTGATAGAAAGACTGCATTTACT
TCCAAGAAAGATTATGGGAAGGAAGATAGGGCAGCTCAGTGGATTCTGTC
TCACAGAAGTCTTCAGGGTTTAATAGGTACAGACTTGGAGTTCAATGGCA
GAAAATCACGTCCCTCTTTGATCGCTGAGCAAGCCAGACGGCGTGCTGAA
ATTGCCAGACTCGGAGAGATACACACATTGAGAGGACATGTCGAATCAGT
CGTGAGGCTTAAAAATCTGGACTTGAATGTAATCCAAGCAGCTCACACAG
TCTGAAGCAAGATGCTATCGATGCTTTATTATTCTATTTTTCAGTGAAGG
AGATTTTGGCAGCAGTTGCTTATAGATTGATGTTGGTTATAAGTTATAAT
CTGCCACAAGTCGATGGAAAATGGTATATGTAATCTATCAATTTTTTTTT
GGGCTTTCATAGTCAAGAACGCGCGTATAGAGCGGTAAC
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