CX052821
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX052821 vs. ExPASy Swiss-Prot
Match: HATB_ARATH (Histone acetyltransferase type B catalytic subunit OS=Arabidopsis thaliana GN=HAG2 PE=2 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 5.960e-60 Identity = 111/176 (63.07%), Postives = 144/176 (81.82%), Query Frame = -3 Query: 320 EPLDSFQHVRTCVDIQHLLAFEPIQHAINSAVSHLKQGKLSKKILAPRFVPPASTVEEVRKVLKINKKQFLQCWEILIYLRLDPVDKYMEDYTTIISNRVREDILGKDSGSTDKRIMDVPSSYDPEMSFVMFKSQNVE--TSGVQMDENQPSQEEQLKQLVDKRIKEIKLIAQKVS 841 EP + FQH+RTC+DI L +F+PI+ I+SAV L +GKLSKK PRF PP + +E+VR+ LKINKKQFL+CWEILIYL LDP+DKYMEDYT++I+N VR DILGKD + K+++DVPSS++PE SFV+FKS N E + VQ+DEN+P QE+QLKQLV++RI+EIKL+A+KVS Sbjct: 284 EPSEKFQHIRTCIDINRLRSFDPIKPDIDSAVQTLTKGKLSKKAQIPRFTPPLNAIEKVRESLKINKKQFLKCWEILIYLALDPIDKYMEDYTSVITNHVRTDILGKDIETPKKQVVDVPSSFEPEASFVVFKSVNGEEANTNVQVDENKPDQEQQLKQLVEERIREIKLVAEKVS 459
BLAST of CX052821 vs. ExPASy Swiss-Prot
Match: HAT1_MAIZE (Histone acetyltransferase type B catalytic subunit OS=Zea mays GN=HAT1 PE=1 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 1.478e-34 Identity = 78/178 (43.82%), Postives = 119/178 (66.85%), Query Frame = -3 Query: 320 PLDSFQHVRTCVDIQHLLAFEPIQHAINSAVSHLKQGKLSKKILAPRFVPPASTVEEVRKVLKINKKQFLQCWEILIYLRLDPVD-KYMEDYTTIISNRVREDILGKDSGSTDKRIMDVPSSYDPEMSFVMFKSQNVETSGVQMDENQP----SQEEQLKQLVDKRIKEIKLIAQKVS 838 P D Q+VR+ +D LL F+PI+ A+ + V LK+ LSK+ + R VPPA +E VR+ LKINKKQFL+CWEIL++L LD D K M+++ I +R++ +ILG SG+ KR++ +P+S++ E SF ++ +Q +E Q E QP +QE+QL +LVD +I+EI +A+ V+ Sbjct: 278 PSDYLQYVRSSIDCLRLLMFDPIKPALGAIVLSLKETNLSKRAQSLRMVPPADLMETVRQKLKINKKQFLRCWEILVFLSLDSQDHKSMDNFRACIYDRMKGEILGSASGTNRKRLLQMPTSFNKEASFAVYWTQEIEDEDEQTVEQQPEDLKTQEQQLNELVDIQIEEIAGVAKNVT 455
BLAST of CX052821 vs. ExPASy Swiss-Prot
Match: HAT1_ORYSJ (Probable acetyltransferase type B catalytic subunit OS=Oryza sativa subsp. japonica GN=HATB PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.788e-33 Identity = 76/179 (42.46%), Postives = 117/179 (65.36%), Query Frame = -3 Query: 320 EPLDSFQHVRTCVDIQHLLAFEPIQHAINSAVSHLKQGKLSKKILAPRFVPPASTVEEVRKVLKINKKQFLQCWEILIYLRLDPVD-KYMEDYTTIISNRVREDILGKDSGSTDKRIMDVPSSYDPEMSFVMFKSQNVETSGVQMDENQP----SQEEQLKQLVDKRIKEIKLIAQKVS 841 +P D Q++R+ +D LL F+PI+ A+ S VS LK LSK+ + + VPP+ E VR+ LKINKKQFL+CWEILIYL LD D K M+++ I +R++ +ILG +G KR++ +PS++D E F ++ +Q+ + Q E QP +QE+QL ++VD +++EI IA+ V+ Sbjct: 275 DPSDYLQYIRSSIDCLRLLTFDPIKPALCSMVSSLKDTNLSKRTSSLKMVPPSDLAETVRQKLKINKKQFLRCWEILIYLNLDAEDRKSMDNFRACIYDRIKGEILGTSTGPNGKRLVQMPSNFDEETCFAVYWTQDGGDADDQTVEQQPEDLKTQEQQLNEVVDSQMEEIVEIAKNVT 453 The following BLAST results are available for this feature:
BLAST of CX052821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX052821 ID=CX052821; Name=CX052821; organism=Citrus sinensis; type=EST; length=843bpback to top |