DN621595

Overview
NameDN621595
Unique NameDN621595
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2265 contig Csv1_Contig2265:667..1355. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621595 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.291e-40
Identity = 81/163 (49.69%), Postives = 113/163 (69.33%), Query Frame = 3
Query:   54 TDKLKENTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNP--SERDSLYGPFPELISPEKPARFRQFTYTDYVTRFFTKQLDGKTLVNYYRL 536
            T+ LK+       +++GHYYP CPQPDLT+G+T H+D   LTILLQD  GGLQ+ H + WVDV PVPGALV+N+GD+LQ+++ND++ISVEHRVLAN +  PRIS+A FF+        +YGP  E++S E P  +R  T T+Y   + +K  DG + + Y ++
Sbjct:  204 TNHLKDMDCTNSLLLLGHYYPPCPQPDLTLGLTKHSDNSFLTILLQDHIGGLQVLHDQYWVDVPPVPGALVVNVGDLLQLITNDKFISVEHRVLANVA-GPRISVACFFSSYLMANPRVYGPIKEILSEENPPNYRDTTITEYAKFYRSKGFDGTSGLLYLKI 365          
BLAST of DN621595 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.023e-37
Identity = 81/168 (48.21%), Postives = 112/168 (66.67%), Query Frame = 3
Query:   51 KTDKLKENTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDS------LYGPFPELISPEKPARFRQFTYTDYVTRFFTKQLDGKTLVNYYRL 536
            K + L+E    EG +++GHYYP CPQP+LT G + H+D G LTIL+QD  GGLQI    +W+DV  +PGALVINI D+LQ+++ND++ SVEHRVLAN  + PRIS+AV F    +        LYGP  ELIS E P  +++ T  D++T  F K+ D  + ++ +RL
Sbjct:  233 KPNHLEEMDCAEGLILLGHYYPACPQPELTFGTSKHSDSGFLTILMQDQIGGLQILLENQWIDVPFIPGALVINIADLLQLITNDKFKSVEHRVLAN-KVGPRISVAVAFGIKTQTQEGVSPRLYGPIKELISEENPPIYKEVTVKDFITIRFAKRFDDSSSLSPFRL 399          
BLAST of DN621595 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.889e-37
Identity = 72/153 (47.06%), Postives = 105/153 (68.63%), Query Frame = 3
Query:   84 EGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDS--LYGPFPELISPEKPARFRQFTYTDYVTRFFTKQLDGKTLVNYYRL 536
            +G +M+ HYYP CP+PDLT+G + H+D   LT+LL D   GLQ++    W DV  V GAL+INIGD+LQ+++ND++IS+EHRVLAN +   R+S+A FF    R +  +YGP  EL+S E P ++R+ T  DY T F  K LDG + + ++++
Sbjct:  217 KGLLMLSHYYPPCPEPDLTLGTSQHSDNSFLTVLLPDQIEGLQVRREGHWFDVPHVSGALIINIGDLLQLITNDKFISLEHRVLANRATRARVSVACFFTTGVRPNPRMYGPIRELVSEENPPKYRETTIKDYATYFNAKGLDGTSALLHFKI 369          
BLAST of DN621595 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.633e-37
Identity = 72/146 (49.32%), Postives = 102/146 (69.86%), Query Frame = 3
Query:  105 HYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFF--NPSERDSLYGPFPELISPEKPARFRQFTYTDYVTRFFTKQLDGKTLVNYYRL 536
            +YYP CPQP+LT+G   HTD G +TILLQDD GGLQ+ H   WVDV P PG+LV+NIGD LQ++SND+Y+SVEHR ++N ++  R+SI  FF  +P +   LYGP  EL+S + P ++R  T  D+ +    + LDG + ++ Y++
Sbjct:  219 NYYPPCPQPELTMGTIQHTDIGFVTILLQDDMGGLQVLHQNHWVDVPPTPGSLVVNIGDFLQLLSNDKYLSVEHRAISN-NVGSRMSITCFFGESPYQSSKLYGPITELLSEDNPPKYRATTVKDHTSYLHNRGLDGTSALSRYKI 363          
BLAST of DN621595 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.383e-34
Identity = 72/151 (47.68%), Postives = 102/151 (67.55%), Query Frame = 3
Query:   63 LKENTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDS--LYGPFPELISPEKPARFRQFTYTDYVTRFFTKQLDG 509
            LK+   L+G  M+ HY+P CP+PDLT G + H+D   LT+LL D+  GLQ+     W DV  VPGAL+INIGD+LQ+++ND++IS++HRVLAN +   R+S+A FF+   + +  +YGP  EL+S E P ++R+ T  DY T F  K L G
Sbjct:  210 LKDMECLKGLRMLCHYFPPCPEPDLTFGTSKHSDGSFLTVLLPDNIEGLQVCREGYWFDVPHVPGALIINIGDLLQLITNDKFISLKHRVLANRATRARVSVACFFHTHVKPNPRVYGPIKELVSEENPPKYRETTIRDYATYFNGKGLGG 360          
BLAST of DN621595 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.441e-31
Identity = 69/163 (42.33%), Postives = 104/163 (63.80%), Query Frame = 3
Query:   63 LKENTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFF-----NPSERDSLYGPFPELISPEKPARFRQFTYTDYVTRFFTKQLDGKTLVNYYRL 536
            LKE    +G  M+ H +P CP+P+ T G   HTD   LTILL D+ GGLQ+ +   W+DV P P AL+ N+GD LQ++SND+++S+EHR+LAN   EPRIS+A FF     +PS R  +YGP  EL+S   P ++R  T ++    +  ++ +G + +++ R+
Sbjct:  200 LKEMDCAKGLWMLCHCFPPCPEPNRTFGGAQHTDRSFLTILLNDNNGGLQVLYDGYWIDVPPNPEALIFNVGDFLQLISNDKFVSMEHRILANGGEEPRISVACFFVHTFTSPSSR--VYGPIKELLSELNPPKYRD-TTSESSNHYVARKPNGNSSLDHLRI 359          
BLAST of DN621595 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.134e-28
Identity = 65/145 (44.83%), Postives = 94/145 (64.83%), Query Frame = 3
Query:  105 HYYPYCPQPDLTVGITSHTDPGPLTILLQ-DDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQFTYTDYVTRFFTKQLDGKTLVNYYRL 536
            +YYP CPQPD  +G+T H+D   LT+L+Q +D  GLQIK   +WV VKP+P A ++NIGD+L+I++N  Y S+EHR + NS  E R+SIA F N      + GP   L+  +K ARF++ T  +Y    F++ LDGK  ++  R+
Sbjct:  216 NYYPPCPQPDQVIGLTPHSDSVGLTVLMQVNDVEGLQIKKDGKWVPVKPLPNAFIVNIGDVLEIITNGTYRSIEHRGVVNSEKE-RLSIATFHNVGMYKEV-GPAKSLVERQKVARFKRLTMKEYNDGLFSRTLDGKAYLDALRI 358          
BLAST of DN621595 vs. ExPASy Swiss-Prot
Match: ACCO1_ARATH (1-aminocyclopropane-1-carboxylate oxidase OS=Arabidopsis thaliana GN=ACO PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 3.088e-26
Identity = 62/139 (44.60%), Postives = 87/139 (62.59%), Query Frame = 3
Query:  111 YPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELI----SPEKPARFRQFTYTDYVTRFFTKQLDGK 512
            YP CP PDL  G+ +HTD G + +L QDDK  GLQ+    EWVDV PV  ++V+N+GD L++++N +Y SVEHRVL+ +  E R+SIA F+NP   DS+  P PELI      EK   + +F + DY+  +   +   K
Sbjct:  162 YPPCPNPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPVKHSIVVNLGDQLEVITNGKYKSVEHRVLSQTDGEGRMSIASFYNPGS-DSVIFPAPELIGKEAEKEKKENYPRFVFEDYMKLYSAVKFQAK 299          
BLAST of DN621595 vs. ExPASy Swiss-Prot
Match: FLS_PETCR (Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.614e-25
Identity = 58/129 (44.96%), Postives = 83/129 (64.34%), Query Frame = 3
Query:   93 MMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQFTYTDYV 479
            M+  +YYP CP+PDL +G+ +HTD   +TIL+ ++  GLQ+   + W DVK +P AL+I+IGD ++IMSN +Y SV HR   N   + R+S  VF  P   + L GP  +LI+ E PA+F+   Y DYV
Sbjct:  202 MLKINYYPPCPRPDLALGVVAHTDMSAITILVPNEVQGLQVHKDDHWYDVKYIPNALIIHIGDQIEIMSNGKYKSVYHRTTVNKD-KTRMSWPVFLEPPP-ELLTGPISKLITDENPAKFKTKKYKDYV 328          
BLAST of DN621595 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.775e-24
Identity = 55/132 (41.67%), Postives = 77/132 (58.33%), Query Frame = 3
Query:  105 HYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQFTYTDYVTRFFTKQ 500
            +YYP CPQP+L VG+ +HTD   L+ +L +   GLQ+ HG  WV  +  PG +++++GD L+I+SN  Y SV HR L N     RIS  VF  P     L  P PEL++   PARF   T+  ++ R   K+
Sbjct:  237 NYYPRCPQPELAVGVEAHTDVSALSFILHNGVPGLQVLHGARWVTARHEPGTIIVHVGDALEILSNGRYTSVLHRGLVNRE-AVRISWVVFCEPPPDSVLLHPLPELVTEGHPARFTPRTFKQHLDRKLFKK 367          
The following BLAST results are available for this feature:
BLAST of DN621595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
ACCH1_ARATH1.291e-4049.691-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
DV4H_CATRO1.023e-3748.21Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]
ACCH3_ARATH3.889e-3747.061-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCH3_SOLLC6.633e-3749.321-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCH2_ARATH1.383e-3447.681-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
GSL_ARATH2.441e-3142.33Probable 2-oxoacid dependent dioxygenase OS=Arabid... [more]
SRG1_ARATH1.134e-2844.83Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]
ACCO1_ARATH3.088e-2644.601-aminocyclopropane-1-carboxylate oxidase OS=Arabi... [more]
FLS_PETCR2.614e-2544.96Flavonol synthase/flavanone 3-hydroxylase OS=Petro... [more]
LDOX_MAIZE3.775e-2441.67Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06O21_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006O21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621595 ID=DN621595; Name=DN621595; organism=Citrus sinensis; type=EST; length=691bp
AAAAGCTCGGAGAGCTTTTGTTTGGGCTGCTGTGTGAAGGTTTGGGGTTG
AAAACCGATAAGTTGAAGGAAAATACCTTCCTGGAAGGGAGGATGATGGT
GGGCCATTATTATCCCTACTGTCCGCAGCCTGATCTGACAGTGGGGATCA
CATCTCATACTGATCCAGGGCCATTGACAATCTTGTTGCAAGATGATAAA
GGTGGGCTGCAAATTAAGCATGGTGAGGAATGGGTGGATGTTAAACCAGT
TCCAGGAGCTCTGGTTATTAACATTGGAGATATACTTCAGATTATGTCCA
ATGATGAATACATAAGTGTAGAGCATAGAGTATTGGCTAATTCGTCCCTG
GAACCACGAATCTCAATTGCTGTTTTCTTCAATCCAAGCGAGAGGGACAG
CCTTTATGGACCATTCCCGGAGCTGATATCCCCAGAGAAGCCAGCTCGTT
TTCGGCAGTTCACATACACGGACTATGTAACAAGGTTCTTCACAAAACAG
TTAGATGGAAAAACATTGGTGAATTACTATAGGCTGTAAGAAACAAAATT
TGGTAAATCTGGTTGTTTGTGCCTGTATAAACTATTCTTGCGTAAGAATA
ACAATTCAAGTGCTCGTCTCATTGAAACTACAGTATGTATATATTGTTGC
TATTCACTAATTATAGCAATGTTGGGCTTCAAAAAAAAAAA
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