DN621591

Overview
NameDN621591
Unique NameDN621591
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13760 contig Csv1_Contig13760:314..999. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DN621591 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.199e-16
Identity = 40/88 (45.45%), Postives = 52/88 (59.09%), Query Frame = -3 
Query:  445 VVRESTDLNL-----------IEPVWTVGNYNASLGKWFLTTGGIVGHPGAKTLLNWFKLKKVSVSIYNLVHCPSVCDSCVKLCNKVG 675
            VVR STD+N+              VW + NY+ S GKW++TT G+ G PG  TL +WFK++K  V  Y    CPSVCDSC  LC+ +G
Sbjct:   97 VVRVSTDVNIEFVPIRDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLGYKFRFCPSVCDSCTTLCSDIG 184
[Close]
BLAST of DN621591 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 2.972e-13
Identity = 38/91 (41.76%), Postives = 54/91 (59.34%), Query Frame = -3 
Query:  439 VVRESTDLNL-----------IEPVWTVGNYNASLGKWFLTTGGIVGHPGAKTLLNWFKLKKVSVS-IYNLVHCPSVCDSCVKLCNKVGIF 675
            VVR STDLN+              VW +  Y+ S G++F+T GG+ G+PG +T+ +WFK+++   S  Y LV CP+VC SC   C  VGI+
Sbjct:  104 VVRVSTDLNINFSAFMPCRWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCGSGFYKLVFCPTVCGSCKVKCGDVGIY 194
The following BLAST results are available for this feature:
BLAST of DN621591 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ASP_THECC2.199e-1645.4521 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU2.972e-1341.76Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_06O19_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006O19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621591 ID=DN621591; Name=DN621591; organism=Citrus sinensis; type=EST; length=686bp
TTTTTTTTTTTTTTTTTGAAAAAAGAGACATAATTTATTGCATTTTGTAT
ATGTAAATCCAATGAGGAGTTGCCATCAAGACGCATGTTTACATCATAGA
AAATAACAATTGCCTCCATGTTAAACACTCAAACCTAGCAACCTCTTGAG
CCTTCAGTCCAAAATGCCACGGAATCGATCGTCATTTTTTTCCCCCTTTT
ACACATAACAAAGTAGAAATTAACAGCATAAATATATATCCCAGGCTAGC
TAATTAATTTACTATTAATCATAGAGATTAGAGTACTAGCTAGCCTGGTA
AATTATTCAAAATATATAATATAGCTAGGTCATTCATTACATAGAGGATC
TTGAAGGATTAGGAGCTGGAAATAACACCAACCGGAGAGGCTGATCATCA
TCACGAACCAGAACCAGACGTCGAACGCCGTCCACATAAAAGATGCCGAC
TTTGTTACAGAGTTTAACGCAAGAATCGCAAACAGATGGACAATGAACAA
GATTGTATATACTGACACTAACTTTCTTAAGCTTAAACCAATTTAGCAAC
GTTTTAGCTCCTGGGTGGCCGACGATTCCTCCGGTTGTTAGAAACCATTT
TCCTAATGAAGCATTATAGTTACCAACTGTCCATACTGGTTCTATCAAGT
TGAGATCAGTGGATTCCCGGACAACTGTAGAATTGT
back to top