DN621590

Overview
NameDN621590
Unique NameDN621590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length723
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10775 contig Csv1_Contig10775:939..1661. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621590 vs. ExPASy Swiss-Prot
Match: METB_ARATH (Cystathionine gamma-synthase, chloroplastic OS=Arabidopsis thaliana GN=CGS1 PE=2 SV=3)

HSP 1 Score: 414.846 bits (1065), Expect = 2.273e-115
Identity = 201/241 (83.40%), Postives = 222/241 (92.12%), Query Frame = 1
Query:    1 LEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEV 723
            LEGAEST++MASGM ASTVMLLALVPAGGHIVTTTDCYRKTRIF+E  LPK+GIT TVIDPAD+ GLEAA+N   VSLFFTESPTNPFLRCVD++LVS +CHK+G +VCIDGTFATPLNQKAL+LGADLV+HSATK+IGGHNDVLAGCI GS KLV++IRNLHHVLGG LNPNAAYLIIRGMKTLHLRVQQQNSTA RMA+ILEAHPKV  V+YPGL SHPEH +A +QMTGFGGVVSFE+
Sbjct:  244 LEGAESTLVMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFMENFLPKLGITVTVIDPADIAGLEAAVNEFKVSLFFTESPTNPFLRCVDIELVSKICHKRGTLVCIDGTFATPLNQKALALGADLVVHSATKYIGGHNDVLAGCICGSLKLVSEIRNLHHVLGGTLNPNAAYLIIRGMKTLHLRVQQQNSTAFRMAEILEAHPKVSHVYYPGLPSHPEHELAKRQMTGFGGVVSFEI 484          
BLAST of DN621590 vs. ExPASy Swiss-Prot
Match: MCCB_BACSU (Cystathionine gamma-lyase OS=Bacillus subtilis GN=mccB PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.076e-48
Identity = 96/242 (39.67%), Postives = 158/242 (65.29%), Query Frame = 1
Query:    1 LEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAG-CISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEV 723
            LE  E+    +SGM+A T +++ L  +G H+V T D Y  T   +  VL ++GI +T +D +  E +E A+  N  +++  E+PTNP L+  D+ L++D+  K G ++ +D TF TP  Q+ L+LGAD+VLHSATK++GGH+DV+ G  ++ S++L  ++  + +  GG L P  ++L++RG+KTL LR++  +  A ++A  LE HP V+ ++YPG  +HP H +A  Q  GFGG++SF++
Sbjct:   62 LESGEAGYAFSSGMAAITAVMM-LFNSGDHVVLTDDVYGGTYRVMTKVLNRLGIESTFVDTSSREEVEKAIRPNTKAIYI-ETPTNPLLKITDLTLMADIAKKAGVLLIVDNTFNTPYFQQPLTLGADIVLHSATKYLGGHSDVVGGLVVTASKELGEELHFVQNSTGGVLGPQDSWLLMRGIKTLGLRMEAIDQNARKIASFLENHPAVQTLYYPGSSNHPGHELAKTQGAGFGGMISFDI 301          
BLAST of DN621590 vs. ExPASy Swiss-Prot
Match: METC_LACLM (Cystathionine beta-lyase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=metC PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.338e-48
Identity = 98/242 (40.50%), Postives = 158/242 (65.29%), Query Frame = 1
Query:    1 LEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCIS-GSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEV 723
            LEG       +SG+ A    +L+L  AG HI+   D Y  T   ++ VL K GI   ++D ++++ L+AA      +++F E+P+NP L+ +D+K +S +     A+  +D TFATP  Q+ ++LGAD+VLHSATK++GGH+DV+AG ++  S++L ++I  L + +G  L P  ++L+ RG+KTL LR++  ++ A ++A+ LE    V +V+YPGL SHP H IA +QM+ FGG++SFE+
Sbjct:   63 LEGGVQGFAFSSGL-AGIHAVLSLFSAGDHIILADDVYGGTFRLMDKVLTKTGIIYDLVDLSNLDDLKAAFKEETKAIYF-ETPSNPLLKVLDIKEISAIAKAHDALTLVDNTFATPYLQQPIALGADIVLHSATKYLGGHSDVVAGLVTTNSKELASEIGFLQNSIGAVLGPQDSWLVQRGIKTLALRMEAHSANAQKIAEFLETSKAVSKVYYPGLNSHPGHEIAKKQMSAFGGMISFEL 302          
BLAST of DN621590 vs. ExPASy Swiss-Prot
Match: METC_LACLA (Cystathionine beta-lyase OS=Lactococcus lactis subsp. lactis GN=metC PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.338e-48
Identity = 98/242 (40.50%), Postives = 158/242 (65.29%), Query Frame = 1
Query:    1 LEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCIS-GSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEV 723
            LEG       +SG+ A    +L+L  AG HI+   D Y  T   ++ VL K GI   ++D ++++ L+AA      +++F E+P+NP L+ +D+K +S +     A+  +D TFATP  Q+ ++LGAD+VLHSATK++GGH+DV+AG ++  S++L ++I  L + +G  L P  ++L+ RG+KTL LR++  ++ A ++A+ LE    V +V+YPGL SHP H IA +QM+ FGG++SFE+
Sbjct:   63 LEGGVQGFAFSSGL-AGIHAVLSLFSAGDHIILADDVYGGTFRLMDKVLTKTGIIYDLVDLSNLDDLKAAFKEETKAIYF-ETPSNPLLKVLDIKEISAIAKAHDALTLVDNTFATPYLQQPIALGADIVLHSATKYLGGHSDVVAGLVTTNSKELASEIGFLQNSIGAVLGPQDSWLVQRGIKTLALRMEAHSANAQKIAEFLETSKAVSKVYYPGLNSHPGHEIAKKQMSAFGGMISFEL 302          
BLAST of DN621590 vs. ExPASy Swiss-Prot
Match: METB_HERAU (Probable cystathionine gamma-synthase (Fragment) OS=Herpetosiphon aurantiacus GN=metB PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.553e-47
Identity = 95/239 (39.75%), Postives = 152/239 (63.60%), Query Frame = 1
Query:    1 LEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCI-SGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVS 714
            LE A+  ++ ASG+ AST ++L L  AG H++   D Y  T    + V+ + G++   ID AD E + AA+  N   L + E+PTNP L+   +  ++ +  + G    +D TFA+P NQ+ ++LGAD+VLHS TK+IGGH+DV+ G I + +++L  +++ L +  G    P   +L++RG+KTL +R++     AL +A+ L  HP V++V YPGL SHP+H++A +QM GFGG++S
Sbjct:   64 LEEAKHALVFASGLGASTTLMLML-KAGDHVICGDDVYGGTYRLFQRVMTEHGLSFDFIDMADPEAVRAAIKPNT-RLIWLETPTNPLLKLAPIAAITRVAREHGIWTIVDNTFASPYNQRPITLGADMVLHSTTKYIGGHSDVVGGAIMTSNDELYEKLKFLQNAAGAVPGPFDCWLVLRGVKTLSIRMRDDERNALAIAQFLTEHPGVEKVIYPGLPSHPQHNLAREQMRGFGGMIS 300          
BLAST of DN621590 vs. ExPASy Swiss-Prot
Match: METC_LACLC (Cystathionine beta-lyase OS=Lactococcus lactis subsp. cremoris GN=metC PE=1 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 7.708e-47
Identity = 98/242 (40.50%), Postives = 155/242 (64.05%), Query Frame = 1
Query:    1 LEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCI-SGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEV 723
            LEG       +SG+ A    +L+L  AG HI+   D Y  T   ++ VL K GI   ++D +++E L+AA      +++F E+P+NP L+ +D+K +S +     A+  +D TFATP  Q+ ++LGAD+VLHSATK++GGH+DV+AG + + S +L  +I  L + +G  L P  ++L+ RG+KTL  R++  ++ A ++A+ LEA   V +V+YPGL +H  H IA +QMT FGG++SFE+
Sbjct:   63 LEGGVQGFAFSSGL-AGIHAVLSLFSAGDHIILADDVYGGTFRLVDKVLTKTGIIYDLVDLSNLEDLKAAFKAETKAVYF-ETPSNPLLKVLDIKEISSIAKAHNALTLVDNTFATPYLQQPIALGADIVLHSATKYLGGHSDVVAGLVTTNSNELAIEIGFLQNSIGAVLGPQDSWLVQRGIKTLAPRMEAHSANAQKIAEFLEASQAVSKVYYPGLVNHEGHEIAKKQMTAFGGMISFEL 302          
BLAST of DN621590 vs. ExPASy Swiss-Prot
Match: METZ_PSEAE (O-succinylhomoserine sulfhydrylase OS=Pseudomonas aeruginosa GN=metZ PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.243e-46
Identity = 92/241 (38.17%), Postives = 146/241 (60.58%), Query Frame = 1
Query:    1 LEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEV 723
            LEGAE  V  ASGMSA   ++++L  +G H++ +   +  T    +    + GI       +D+   EAA   N   LFF ESP+NP    VD+  ++++ H KGA++ +D  F TP  Q+ L LGAD+V+HSATK+I G    + G ++G  + + ++       G  L+P  A+L ++G++TL +R+Q  +++AL +A+ LE  P ++RV+Y GL SHP+H +A +Q +GFG VVSF+V
Sbjct:   85 LEGAEQAVATASGMSAILALVMSLCSSGDHVLVSRSVFGSTISLFDKYFKRFGIQVDYPPLSDLAAWEAACKPNT-KLFFVESPSNPLAELVDIAALAEIAHAKGALLAVDNCFCTPALQQPLKLGADVVIHSATKYIDGQGRGMGGVVAGRGEQMKEVVGFLRTAGPTLSPFNAWLFLKGLETLRIRMQAHSASALALAEWLERQPGIERVYYAGLPSHPQHELARRQQSGFGAVVSFDV 324          
BLAST of DN621590 vs. ExPASy Swiss-Prot
Match: METB_HELPY (Cystathionine gamma-synthase OS=Helicobacter pylori GN=metB PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.523e-46
Identity = 95/240 (39.58%), Postives = 147/240 (61.25%), Query Frame = 1
Query:    1 LEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCIS-GSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSF 717
            LEG       ASG+ A    + +L+ +G H++   D Y  T      VL K G++ T+ID +D+  ++ A+  N  +L+  E+P+NP L+  D+   + +    G +  +D TFATP  Q  L LGAD+V HS TK++GGH+DV+AG ++  +E L  +I    + +GG L P  ++L+ RG+KTL LR++     AL +A+ LE HPKV+RV+YPGL +HP + +A +QM GF G++SF
Sbjct:   62 LEGGVKGFAFASGL-AGIHAVFSLLQSGDHVLLGDDVYGGTFRLFNQVLVKNGLSCTIIDTSDISQIKKAIKPNTKALYL-ETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQNPLLLGADIVAHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQRGIKTLGLRMEAHQKNALCVAEFLEKHPKVERVYYPGLPTHPNYELAKKQMRGFSGMLSF 299          
BLAST of DN621590 vs. ExPASy Swiss-Prot
Match: MEGL_PSEPU (Methionine gamma-lyase OS=Pseudomonas putida GN=mdeA PE=1 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 3.239e-45
Identity = 97/243 (39.92%), Postives = 150/243 (61.73%), Query Frame = 1
Query:    1 LEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEKLVTQIR--NLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEV 723
            LEG E+ + +ASGM A T  L  L+  G  ++     Y  T  F+   + + G+    +D AD++ LEAA+      ++F ESP NP +   D+  V+ +  K GA V +D T+ TP  Q+ L LGADLV+HSATK++ GH D+ AG + GS+ LV +IR   L  + G  L+P+ A L++RG+KTL+LR+ +  + A  +A+ L   P+V+ +HYPGL S P++ +A QQM+  GG+++FE+
Sbjct:   77 LEGGEAGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMADLQALEAAMTPATRVIYF-ESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQRPLELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKTLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFEL 318          
BLAST of DN621590 vs. ExPASy Swiss-Prot
Match: METB_MYCLE (Cystathionine gamma-synthase OS=Mycobacterium leprae GN=metB PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.321e-43
Identity = 93/232 (40.09%), Postives = 137/232 (59.05%), Query Frame = 1
Query:   31 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGC-ISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEV 723
            +SGM+AS   L  ++  G H++   D Y  T   I+ V  +  +  T +  +D++ + AA+ +    L + E+PTNP L   D+  + +L  K    V +D TFA+P  Q+ L LGAD+VLHS TK+IGGH+DV+ G  ++  E+L      L +  G   +P  AYL +RG+KTL LR+Q+ N  A+ +A+ L  HP V  V YPGL SHP H +A +QM GFGG+VS  +
Sbjct:   84 SSGMAASDCALRVMLRPGDHVIIPDDVYGGTFRLIDKVFTQWNVDYTPVPLSDLDAVRAAITSRT-RLIWVETPTNPLLSIADITSIGELGKKHSVKVLVDNTFASPALQQPLMLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQAFGFLQNGAGAVPSPFDAYLTMRGLKTLVLRMQRHNENAITVAEFLAGHPSVSAVLYPGLPSHPGHEVAARQMRGFGGMVSLRM 314          
The following BLAST results are available for this feature:
BLAST of DN621590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
METB_ARATH2.273e-11583.40Cystathionine gamma-synthase, chloroplastic OS=Ara... [more]
MCCB_BACSU1.076e-4839.67Cystathionine gamma-lyase OS=Bacillus subtilis GN=... [more]
METC_LACLM5.338e-4840.50Cystathionine beta-lyase OS=Lactococcus lactis sub... [more]
METC_LACLA5.338e-4840.50Cystathionine beta-lyase OS=Lactococcus lactis sub... [more]
METB_HERAU1.553e-4739.75Probable cystathionine gamma-synthase (Fragment) O... [more]
METC_LACLC7.708e-4740.50Cystathionine beta-lyase OS=Lactococcus lactis sub... [more]
METZ_PSEAE2.243e-4638.17O-succinylhomoserine sulfhydrylase OS=Pseudomonas ... [more]
METB_HELPY8.523e-4639.58Cystathionine gamma-synthase OS=Helicobacter pylor... [more]
MEGL_PSEPU3.239e-4539.92Methionine gamma-lyase OS=Pseudomonas putida GN=md... [more]
METB_MYCLE2.321e-4340.09Cystathionine gamma-synthase OS=Mycobacterium lepr... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06O18_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006O18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621590 ID=DN621590; Name=DN621590; organism=Citrus sinensis; type=EST; length=723bp
CTTGAGGGGGCTGAATCAACTGTGATTATGGCATCTGGAATGAGTGCTAG
CACAGTCATGTTGTTGGCATTGGTTCCAGCCGGTGGGCATATTGTGACAA
CCACTGATTGCTACAGGAAGACTAGGATTTTCATTGAGACTGTTCTGCCC
AAAATGGGAATCACGGCTACGGTGATTGACCCAGCTGATATGGAAGGTTT
GGAGGCAGCACTCAACAATAACAATGTCTCACTATTCTTCACCGAGTCTC
CAACCAATCCATTCCTGAGATGTGTGGATGTCAAACTGGTTTCAGATCTT
TGCCATAAGAAAGGAGCAATAGTTTGCATAGATGGAACCTTTGCCACACC
TCTCAATCAGAAGGCCCTCAGCCTTGGTGCTGATCTTGTACTGCACTCTG
CAACAAAATTCATTGGTGGCCACAATGATGTCCTTGCTGGGTGCATTAGT
GGTTCAGAGAAGTTAGTTACACAAATTCGTAATTTGCATCATGTTTTGGG
TGGTGCTCTCAACCCGAATGCCGCGTATTTGATCATTCGAGGCATGAAGA
CATTGCATCTTCGTGTACAGCAACAAAATTCAACTGCGTTGAGGATGGCC
AAGATTTTAGAGGCACATCCAAAGGTGAAGCGCGTTCACTATCCAGGCTT
GAAGAGTCATCCTGAGCATCACATTGCCACACAGCAAATGACTGGTTTTG
GTGGGGTAGTTAGTTTTGAGGTT
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