CX052809

Overview
NameCX052809
Unique NameCX052809
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX052809 vs. ExPASy Swiss-Prot
Match: ASPR_CUCPE (Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 6.657e-57
Identity = 97/128 (75.78%), Postives = 114/128 (89.06%), Query Frame = -2
Query:  426 MCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 809
            MCS CEM V+WMQN+LR+N+T ++I+NY+N+LCDR+PSP G+SAVDC  LSSMP VSFTIGGK+FDLAP EY+L+VGEG  AQCISGFTAFD+ PPRGPLWILGDVFMGRYHTVFD+G L +G AEAA
Sbjct:  386 MCSVCEMTVVWMQNQLRQNQTKERIINYINELCDRMPSPMGQSAVDCGQLSSMPTVSFTIGGKIFDLAPEEYILKVGEGPVAQCISGFTAFDIPPPRGPLWILGDVFMGRYHTVFDFGKLRVGSAEAA 513          
BLAST of CX052809 vs. ExPASy Swiss-Prot
Match: ASPR_HORVU (Phytepsin OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.388e-54
Identity = 98/128 (76.56%), Postives = 111/128 (86.72%), Query Frame = -2
Query:  426 MCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 809
            MCSACEMAV+WMQN+L +N+T D IL+YVNQLC+RLPSP GESAVDC +L SMP++ FTIGGK F L P EY+L+VGEG AAQCISGFTA D+ PPRGPLWILGDVFMG YHTVFDYG L IGFA+AA
Sbjct:  381 MCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLGSMPDIEFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKAA 508          
BLAST of CX052809 vs. ExPASy Swiss-Prot
Match: ASPR1_ORYSJ (Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=2)

HSP 1 Score: 213.001 bits (541), Expect = 1.813e-54
Identity = 94/128 (73.44%), Postives = 112/128 (87.50%), Query Frame = -2
Query:  426 MCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 809
            MC+ACEMAV+WMQN+L +N+T D ILNY+NQLCD+LPSP GES+VDC +L+SMP +SFTIGGK F L P EY+L+VGEG AAQCISGFTA D+ PPRGPLWILGDVFMG YHTVFDYG + +GFA++A
Sbjct:  382 MCNACEMAVVWMQNQLAQNKTQDLILNYINQLCDKLPSPMGESSVDCGSLASMPEISFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGAYHTVFDYGKMRVGFAKSA 509          
BLAST of CX052809 vs. ExPASy Swiss-Prot
Match: CYPR1_CYNCA (Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO1 PE=1 SV=2)

HSP 1 Score: 209.534 bits (532), Expect = 2.004e-53
Identity = 92/127 (72.44%), Postives = 111/127 (87.40%), Query Frame = -2
Query:  426 CSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 806
            C  C   V+WMQN++R+NET + I+NYV++LC+RLPSP GESAVDC +LSSMPN++FT+GGK F+L+P +YVL+VGEG  AQCISGFTA DVAPP GPLWILGDVFMG+YHTVFDYGNL +GFAEAA
Sbjct:  347 CVPCARWVVWMQNQIRQNETEENIINYVDKLCERLPSPMGESAVDCSSLSSMPNIAFTVGGKTFNLSPEQYVLKVGEGATAQCISGFTAMDVAPPHGPLWILGDVFMGQYHTVFDYGNLRVGFAEAA 473          
BLAST of CX052809 vs. ExPASy Swiss-Prot
Match: ASPRX_ORYSJ (Aspartic proteinase OS=Oryza sativa subsp. japonica GN=RAP PE=2 SV=2)

HSP 1 Score: 187.193 bits (474), Expect = 1.065e-46
Identity = 82/129 (63.57%), Postives = 102/129 (79.07%), Query Frame = -2
Query:  426 AMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 812
            AMCS CEMAV+W++N+LR N+T + ILNY NQLC+RLPSPNGES V C  +S MPN++FTI  K F L P +Y++++ +G    CISGF AFD+ PPRGPLWILGDVFMG YHTVFD+G   IGFA++A
Sbjct:  368 AMCSVCEMAVVWIENQLRENKTKELILNYANQLCERLPSPNGESTVSCHQISKMPNLAFTIANKTFILTPEQYIVKLEQGGQTVCISGFMAFDIPPPRGPLWILGDVFMGAYHTVFDFGKDRIGFAKSA 496          
BLAST of CX052809 vs. ExPASy Swiss-Prot
Match: ASPP_AEDAE (Lysosomal aspartic protease OS=Aedes aegypti GN=AAEL006169 PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 8.214e-23
Identity = 49/99 (49.49%), Postives = 63/99 (63.64%), Query Frame = -2
Query:  429 VNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEA 725
            +N+     P  NGE  VDC  +  +P +SF +GGK FDL   +YVL V +     C+SGF   D+ PP GPLWILGDVF+G+Y+T FD GN  +GFA A
Sbjct:  288 INKAIGGTPIMNGEYMVDCSLIPKLPKISFVLGGKSFDLEGADYVLRVAQMGKTICLSGFMGIDIPPPNGPLWILGDVFIGKYYTEFDMGNDRVGFATA 386          
BLAST of CX052809 vs. ExPASy Swiss-Prot
Match: CATE_RANCA (Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.076e-22
Identity = 51/103 (49.51%), Postives = 68/103 (66.02%), Query Frame = -2
Query:  435 DQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFA 743
            +Q+ NY+      + + NGE  V C  LS MP+V+FTI G  + L P +Y+LE G G    C SGF   D++PP GPLWILGDVF+G+Y++VFD GN  +GFA
Sbjct:  291 EQLQNYIG-----VTNTNGEYGVSCSTLSLMPSVTFTINGLDYSLTPEQYMLEDGGGY---CSSGFQGLDISPPSGPLWILGDVFIGQYYSVFDRGNNRVGFA 385          
BLAST of CX052809 vs. ExPASy Swiss-Prot
Match: CATD_HUMAN (Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.076e-22
Identity = 45/93 (48.39%), Postives = 64/93 (68.82%), Query Frame = -2
Query:  426 LPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 704
            +P   GE  + C+ +S++P ++  +GGK + L+P +Y L+V +     C+SGF   D+ PP GPLWILGDVF+GRY+TVFD  N  +GFAEAA
Sbjct:  318 VPLIQGEYMIPCEKVSTLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVFIGRYYTVFDRDNNRVGFAEAA 410          
BLAST of CX052809 vs. ExPASy Swiss-Prot
Match: CATD_MOUSE (Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.186e-21
Identity = 45/92 (48.91%), Postives = 63/92 (68.48%), Query Frame = -2
Query:  429 LPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEA 704
            +P   GE  + C+ +SS+P V   +GGK ++L P++Y+L+V +G    C+SGF   D+ PP GPLWILGDVF+G Y+TVFD  N  +GFA A
Sbjct:  316 VPLIQGEYMIPCEKVSSLPTVYLKLGGKNYELHPDKYILKVSQGGKTICLSGFMGMDIPPPSGPLWILGDVFIGSYYTVFDRDNNRVGFANA 407          
BLAST of CX052809 vs. ExPASy Swiss-Prot
Match: ASP3_CAEEL (Aspartic protease 3 OS=Caenorhabditis elegans GN=asp-3 PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.186e-21
Identity = 44/91 (48.35%), Postives = 64/91 (70.33%), Query Frame = -2
Query:  435 LPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQ-CISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFA 704
            +P  NGE  V+C  + S+PN++F +GG+ FDL   +Y+L++  G     C+SGF   D+  P GPLWILGDVF+GR+++VFD+GN  +GFA
Sbjct:  302 IPLFNGEYEVECSKIPSLPNITFNLGGQNFDLQGKDYILQMSNGNGGSTCLSGFMGMDIPAPAGPLWILGDVFIGRFYSVFDHGNKRVGFA 392          
The following BLAST results are available for this feature:
BLAST of CX052809 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
ASPR_CUCPE6.657e-5775.78Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1[more]
ASPR_HORVU1.388e-5476.56Phytepsin OS=Hordeum vulgare PE=1 SV=1[more]
ASPR1_ORYSJ1.813e-5473.44Aspartic proteinase oryzasin-1 OS=Oryza sativa sub... [more]
CYPR1_CYNCA2.004e-5372.44Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO... [more]
ASPRX_ORYSJ1.065e-4663.57Aspartic proteinase OS=Oryza sativa subsp. japonic... [more]
ASPP_AEDAE8.214e-2349.49Lysosomal aspartic protease OS=Aedes aegypti GN=AA... [more]
CATE_RANCA4.076e-2249.51Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1[more]
CATD_HUMAN4.076e-2248.39Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1[more]
CATD_MOUSE1.186e-2148.91Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1[more]
ASP3_CAEEL1.186e-2148.35Aspartic protease 3 OS=Caenorhabditis elegans GN=a... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_48B09_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-48B09-C17-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX052809 ID=CX052809; Name=CX052809; organism=Citrus sinensis; type=EST; length=882bp
TTTTTTTTTTTTTTATTTTATGGCAAATACACATTATTAACTGCAAATAT
TTTACAAATGAGTTTTAGTATAAGTCTATATCCTATCACCATGGTGCATA
TATAGATAAATGTTTTAGTTTTGGATCCTGCATTTGTTAATGCTTGGGAA
AGTTATTAAACCGTTTGGTTTAATAGTATAATGACCATGAAAATGATCAA
ACTACATGGTTTAATAGTAGAATGGCATTATGCTATTAAACCTAAACCGC
ACGGTTTAATAACCTTTCCGGATTCTAATAAAGTCCGATCCTGGACTGGA
TTATAATACACACACAGAGACACAAACACACACATATATACACATATATA
TGTATGTATGCATGTGTATATAATTATTACAACAAGCTAGTTATGGAAAT
GGACGAAGCCAGTGGATTTTGTTCAAGCTGCTTCGGCGAATCCAATAGAC
AAGTTGCCGTAGTCGAACACAGTGTGATAGCGACCCATGAAAACATCTCC
CAGAATCCACAGAGGACCACGCGGAGGGGCCACATCGAAAGCAGTAAATC
CACTGATGCATTGGGCTGCAACTCCCTCTCCCACTTCAAGAACATACTCA
TTTGGTGCAAGGTCAAATACTTTGCCACCAATTGTAAATGAAACATTGGG
CATGGAAGATAAATTGTCACAATCAACAGCTGATTCTCCATTTGGACTGG
GCAGACGGTCACAAAGCTGATTCACATAATTCAAGATTTGATCTGCTGTC
TCATTTCTCCTCAGCTTGTTCTGCATCCATATGACCGCCATCTCACAAGC
AGAGCACATAGCAGAGTCATGCACACCATCAGATGACTTGTCTGAGCTCT
TATCTATGACACTCTCAATTCCCATGCTAAAA
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