CX052768
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX052768 vs. ExPASy Swiss-Prot
Match: UBAX1_ARATH (UBA and UBX domain-containing protein At4g15410 OS=Arabidopsis thaliana GN=At4g15410 PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.629e-52 Identity = 118/231 (51.08%), Postives = 143/231 (61.90%), Query Frame = 3 Query: 78 ASRDKKPAKPSSSR-------AGGIRTLSDLNRRSGPXXXXXXXAPQEYYTGGEKSGMLVQDPSKGDPNDVDAIFNQAKELGAVEGPLEHLXXXXXXXXFTGTARLLSGETVPSAPQQ-----PEPIVHNIVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELEPADKRSSVHVNLIRRDVKCPEPEKHHVPFQGVGRTLGSS-STAASEPTVDSTPVNTASSSS 731 A +K+ PS R AG IRT +DLNR EYYTGG+KSGM+VQDP K DVD +F+QA++ AV+ P+E FTG ARLLSGE V S+PQQ P+ I+H I FW NGFTVNDGPLR DPENA+F+ SI +SECP ELEPADK+ VHV+L+RR EP K PFQGVGRTLG+S S ++S P S P+N A + S Sbjct: 111 AGENKETENPSGIRSSRSRQHAGNIRTFADLNRSPADGEGSDSDEANEYYTGGQKSGMMVQDPKK--VKDVDELFDQARQ-SAVDRPVE--PSRSASTSFTGAARLLSGEAVSSSPQQQQQEQPQRIMHTITFWLNGFTVNDGPLRGFSDPENAAFMNSISRSECPSELEPADKKIPVHVDLVRRGENFTEPPKPKNPFQGVGRTLGASGSGSSSAPQASSAPMNVAPAPS 336
BLAST of CX052768 vs. ExPASy Swiss-Prot
Match: NSF1C_DICDI (NSFL1 cofactor p47 homolog OS=Dictyostelium discoideum GN=nsfl1c PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.313e-21 Identity = 77/247 (31.17%), Postives = 118/247 (47.77%), Query Frame = 3 Query: 54 SRKNFQSMASRDKKPAKPSSSRAGGIRTLSDLNRRS------GPXXXXXXXAPQEYYTGGEKSGMLVQDPSK-----GDPNDVDAIFNQAKELGAV---EGPLEHLXXXXXXXXFTGTARLLSGETVPSAPQQPEP----IVHNIVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELE-PADKRSSVHVNLI-RRDVKCPEPEK-HHVPFQGVGRTLGSSSTAASEPTVDSTPVNTASSSS 731 SR + ++ P+ R GGIRTLSD N Q+Y+TGGEKSG++V+ K G + V+ +F+ AK GAV E +E G G S P++ +P + + FW GFT++DGPLR+ D+PEN L+ I++ P+EL+ A + + V LI + EP K +V F G G+TLGSSST+ + ++ N ++++ Sbjct: 76 SRPVYSKPVAKTVSKKAPAGGRVGGIRTLSDFNNDDHDDHDHSDGDDDEDDRSQQYFTGGEKSGLVVESAPKKGKNGGSGDIVNDVFDSAKRHGAVASNEKKVEKPDSFDSVGYQLGATD--QGNRNVSKPKEKDPNSQVVEVKVTFWNQGFTIDDGPLRKYDNPENKELLDDIQRGIVPRELQKKATTPNGLSVTLINNHNQDYVEPAKPKYVAFSGGGQTLGSSSTSTNNNNNNNNNNNNRATTT 320
BLAST of CX052768 vs. ExPASy Swiss-Prot
Match: UBX1_EMENI (UBX domain-containing protein 1 OS=Emericella nidulans GN=ubx1 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.147e-20 Identity = 73/233 (31.33%), Postives = 99/233 (42.49%), Query Frame = 3 Query: 72 SMASRDKKPAKPSSSRAGGIR---TLSDLNRRSGPXXXXXXXAPQEYYTGGEKSGMLVQDPSKGDPNDVDAIFNQAKELGAVEGPLEHLXXXXXXXXFTGTARLLSGETVPSA----------PQQPEPIVHNIVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELEPADKRSSVHVNLIRRDVKCPEPEKHHVPFQGVGRTLGSSSTAASEPTVDSTPVNTASSSS 731 S S P + SSSR + TL DL + Q+++ GGEKSG+ VQ+P ++ P + FTG AR L GE PS PQ P + + FWA+GF+V+DG L R DDP+NA L SI++ P + A V V + + D K P+ + PF G G+ LGS + P S P SSS Sbjct: 60 SAKSSSSTPRESSSSRKQPPKKFATLGDLASGAADSSDDDDDENQDFFAGGEKSGLAVQNPDDLKKKIIEKARRTQLPASDDSEPRRNY--------FTGPARTLGGEDTPSRVIDTPSGPAQPQIPRRVRRTLHFWADGFSVDDGELYRSDDPQNAEILNSIRQGRAPLSIMNAQHGQDVDVEIKQHDEKYVRPKPKYQPFAGKGQRLGSPTPGIRAP-APSEPAPAPQSSS 283
BLAST of CX052768 vs. ExPASy Swiss-Prot
Match: UBX1_YEAST (UBX domain-containing protein 1 OS=Saccharomyces cerevisiae GN=SHP1 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.547e-15 Identity = 68/232 (29.31%), Postives = 98/232 (42.24%), Query Frame = 3 Query: 54 SRKNFQSMASRDKKPAKPSSSRAGG----IRTLSDLNRRSGPXXXXXXXAPQEYYTGGEKSGMLVQDPSKGDPNDV-DAIFNQAK---ELGAVEGPLEHLXXXXXXXXFTGTARLLSGETVPSAPQ-----------QPEPIVHNIVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELEPADKRSSVHVNLIRR-DVKCPEPEKHHVPFQGVGRTLGSSSTAASEP 689 S + + S +P K SS G + SD+ R G P+ + GGE SG+ V DPS DPN + + +A+ ++GA G + FTG L G T+ +A + +PE + I FW GF V DGPL R DDP N+ +L + + P +L V VN+ ++ D P + F G G+ LGS S P Sbjct: 97 SNEYLKRKGSTSPEPTKGSSRSGSGNNSRFMSFSDMVR--GQADDDDEDQPRNTFAGGETSGLEVTDPS--DPNSLLKDLLEKARRGGQMGAENGFRDDEDHEMGANRFTGRGFRL-GSTIDAADEVVEDNTSQSQRRPEKVTREITFWKEGFQVADGPLYRYDDPANSFYLSELNQGRAPLKLLDVQFGQEVEVNVYKKLDESYKAPTRKLGGFSGQGQRLGSPIPGESSP 323
BLAST of CX052768 vs. ExPASy Swiss-Prot
Match: NSF1C_PONAB (NSFL1 cofactor p47 OS=Pongo abelii GN=NSFL1C PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.794e-12 Identity = 64/195 (32.82%), Postives = 90/195 (46.15%), Query Frame = 3 Query: 195 QEYYTGG-EKSGM-LVQDPSKGDPND-VDAIFNQAKELGAV--EGPLEHLXXXXXXXXFTGTARLL-------SGETVPSAPQQPEPIVHNIV-FWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELEPADKRSSVHVNL-IRRDVKCPEPEKHHVPFQGVGRTLGSSS---TAASEPTVDSTPVNTASSS 728 Q +Y GG E+SG +V P K PN+ VD +F AKE GAV E + F G L S Q VH ++ W +GF++++G LR DP NA FLESI++ E P EL V++++ RD +P+ F G G+ LGS++ + S P + ASSS Sbjct: 92 QRFYAGGSERSGQQIVGPPRKKSPNELVDDLFKGAKEHGAVAVERVTKSPGETSKPRPFAGGGYRLGAAPEEESAYVAGEKRQHSSQDVHVVLKLWKSGFSLDNGELRSYQDPSNAQFLESIRRGEVPAELRRLAHGGQVNLDMEDHRDEDFVKPKGAFKAFTGEGQKLGSTAPQVLSTSSPAQQAENEAKASSS 286
BLAST of CX052768 vs. ExPASy Swiss-Prot
Match: NSF1C_HUMAN (NSFL1 cofactor p47 OS=Homo sapiens GN=NSFL1C PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.794e-12 Identity = 64/195 (32.82%), Postives = 90/195 (46.15%), Query Frame = 3 Query: 195 QEYYTGG-EKSGM-LVQDPSKGDPND-VDAIFNQAKELGAV--EGPLEHLXXXXXXXXFTGTARLL-------SGETVPSAPQQPEPIVHNIV-FWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELEPADKRSSVHVNL-IRRDVKCPEPEKHHVPFQGVGRTLGSSS---TAASEPTVDSTPVNTASSS 728 Q +Y GG E+SG +V P K PN+ VD +F AKE GAV E + F G L S Q VH ++ W +GF++++G LR DP NA FLESI++ E P EL V++++ RD +P+ F G G+ LGS++ + S P + ASSS Sbjct: 92 QRFYAGGSERSGQQIVGPPRKKSPNELVDDLFKGAKEHGAVAVERVTKSPGETSKPRPFAGGGYRLGAAPEEESAYVAGEKRQHSSQDVHVVLKLWKSGFSLDNGELRSYQDPSNAQFLESIRRGEVPAELRRLAHGGQVNLDMEDHRDEDFVKPKGAFKAFTGEGQKLGSTAPQVLSTSSPAQQAENEAKASSS 286
BLAST of CX052768 vs. ExPASy Swiss-Prot
Match: NSF1C_RAT (NSFL1 cofactor p47 OS=Rattus norvegicus GN=Nsfl1c PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.395e-11 Identity = 63/200 (31.50%), Postives = 90/200 (45.00%), Query Frame = 3 Query: 195 QEYYTGG-EKSGM-LVQDPSKGDPND-VDAIFNQAKELGAV--EGPLEHLXXXXXXXXFTGTARLLSGETVPSAPQQPEPIVHN-------------IVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELEPADKRSSVHVNL-IRRDVKCPEPEKHHVPFQGVGRTLGSSSTA---ASEPTVDSTPVNTASSS 728 Q +Y GG E+SG +V P K PN+ VD +F AKE GAV E + F G G + +AP++ V + W GF++++G LR DP NA FLESI++ E P EL V++++ RD +P+ F G G+ LGS++ S P + ASSS Sbjct: 92 QRFYAGGSERSGQQIVGPPRKKSPNELVDDLFKGAKEHGAVAVERVTKSPGETSKPRPFAG-----GGYRLGAAPEEESAYVAGERRRHSGQDVHVVLKLWKTGFSLDNGDLRSYQDPSNAQFLESIRRGEVPAELRRLAHGGQVNLDMEDHRDEDFVKPKGAFKAFTGEGQKLGSTAPQVLNTSSPAQQAENEAKASSS 286
BLAST of CX052768 vs. ExPASy Swiss-Prot
Match: NSF1C_MOUSE (NSFL1 cofactor p47 OS=Mus musculus GN=Nsfl1c PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.395e-11 Identity = 63/200 (31.50%), Postives = 90/200 (45.00%), Query Frame = 3 Query: 195 QEYYTGG-EKSGM-LVQDPSKGDPND-VDAIFNQAKELGAV--EGPLEHLXXXXXXXXFTGTARLLSGETVPSAPQQPEPIVHN-------------IVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELEPADKRSSVHVNL-IRRDVKCPEPEKHHVPFQGVGRTLGSSSTA---ASEPTVDSTPVNTASSS 728 Q +Y GG E+SG +V P K PN+ VD +F AKE GAV E + F G G + +AP++ V + W GF++++G LR DP NA FLESI++ E P EL V++++ RD +P+ F G G+ LGS++ S P + ASSS Sbjct: 92 QRFYAGGSERSGQQIVGPPRKKSPNELVDDLFKGAKEHGAVAVERVTKSPGETSKPRPFAG-----GGYRLGAAPEEESAYVAGERRRHSGQDVHVVLKLWKTGFSLDNGDLRSYQDPSNAQFLESIRRGEVPAELRRLAHGGQVNLDMEDHRDEDFVKPKGAFKAFTGEGQKLGSTAPQVLNTSSPAQQAENEAKASSS 286
BLAST of CX052768 vs. ExPASy Swiss-Prot
Match: NSF1C_BOVIN (NSFL1 cofactor p47 OS=Bos taurus GN=NSFL1C PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.395e-11 Identity = 63/200 (31.50%), Postives = 90/200 (45.00%), Query Frame = 3 Query: 195 QEYYTGG-EKSGM-LVQDPSKGDPND-VDAIFNQAKELGAV--EGPLEHLXXXXXXXXFTGTARLLSGETVPSAPQQPEPIVHN-------------IVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELEPADKRSSVHVNL-IRRDVKCPEPEKHHVPFQGVGRTLGSSSTA---ASEPTVDSTPVNTASSS 728 Q +Y GG E+SG +V P K PN+ VD +F AKE GAV E + F G G + +AP++ V + W GF++++G LR DP NA FLESI++ E P EL V++++ RD +P+ F G G+ LGS++ S P + ASSS Sbjct: 92 QRFYAGGSERSGQQIVGPPRKRSPNELVDDLFKGAKEHGAVAVERVTKSPGETSKPRPFAG-----GGYRLGAAPEEESAYVAGERRRHSGQDVHVVLKLWKTGFSLDNGELRSYQDPSNAQFLESIRRGEVPAELRRLAHGGQVNLDMEDHRDEDFVKPKGAFKAFTGEGQKLGSTAPQILNTSSPAQQAENEAKASSS 286
BLAST of CX052768 vs. ExPASy Swiss-Prot
Match: UBX2B_HUMAN (UBX domain-containing protein 2B OS=Homo sapiens GN=UBXN2B PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.301e-11 Identity = 57/197 (28.93%), Postives = 88/197 (44.67%), Query Frame = 3 Query: 141 SDLNRRSGPXXXXXXXAPQEYYTGG-EKSGMLVQDPSKGDPNDVDAIFNQAKELGAVE-GPLEHLXXXXXXXXFTGTARLLSGETVPSAP-----QQPEPIVHNIVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELEPADKRSSVHVNL-IRRDVKCPEPEKHHVPFQGVGRTLGSSSTAASEPTVDSTP 707 S NR PQ +Y+ E SG+ + PS G V+ +F +A+E GAV FTG L + Q + + + W+NGF+++DG LR ++P NA FLES+K+ E P EL+ V++++ +D + +P F G G+ LGS + P + STP Sbjct: 44 SKSNRPKATVFKSPRTPPQRFYSSEHEYSGLNIVRPSTG--KIVNELFKEAREHGAVPLNEATRASGDDKSKSFTGGGYRLGSSFCKRSEYIYGENQLQDVQILLKLWSNGFSLDDGELRPYNEPTNAQFLESVKRGEIPLELQRLVHGGQVNLDMEDHQDQEYIKPRLRFKAFSGEGQKLGSLT-----PEIVSTP 233 The following BLAST results are available for this feature:
BLAST of CX052768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CX052768 ID=CX052768; Name=CX052768; organism=Citrus sinensis; type=EST; length=732bpback to top |