DN621546

Overview
NameDN621546
Unique NameDN621546
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length722
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621546 vs. ExPASy Swiss-Prot
Match: 2AAB_ARATH (Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Arabidopsis thaliana GN=PP2AA2 PE=1 SV=2)

HSP 1 Score: 214.927 bits (546), Expect = 3.425e-55
Identity = 106/118 (89.83%), Postives = 115/118 (97.46%), Query Frame = -1
Query:  369 EWAMQHIIPQVLEMINNPHYLYRMTILRAISLLAPVMGSEITCSRLLPVVINASKDRVPNIKFNVAKVLQSLIPIVDQSMVEKTIRPCLVELTEDPDVDVRFFATQAIQSIDHVMMSS 722
            EWAMQHI+PQVLEM+NNPHYLYRMTILRA+SLLAPVMGSEITCS+LLPVV+ ASKDRVPNIKFNVAKVLQSLIPIVDQS+VEKTIRP LVEL+EDPDVDVRFFA QA+QSID+VMMSS
Sbjct:  470 EWAMQHIVPQVLEMVNNPHYLYRMTILRAVSLLAPVMGSEITCSKLLPVVMTASKDRVPNIKFNVAKVLQSLIPIVDQSVVEKTIRPGLVELSEDPDVDVRFFANQALQSIDNVMMSS 587          
BLAST of DN621546 vs. ExPASy Swiss-Prot
Match: 2AAG_ARATH (Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A gamma isoform OS=Arabidopsis thaliana GN=PP2AA3 PE=1 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 4.946e-54
Identity = 102/118 (86.44%), Postives = 113/118 (95.76%), Query Frame = -1
Query:  369 EWAMQHIIPQVLEMINNPHYLYRMTILRAISLLAPVMGSEITCSRLLPVVINASKDRVPNIKFNVAKVLQSLIPIVDQSMVEKTIRPCLVELTEDPDVDVRFFATQAIQSIDHVMMSS 722
            EWAMQHI+PQVLEMINNPHYLYRMTILRA+SLLAPVMGSEITCS+LLP VI ASKDRVPNIKFNVAK++QSLIPIVDQ++VE  IRPCLVEL+EDPDVDVR+FA QA+QSID+VMMSS
Sbjct:  470 EWAMQHIVPQVLEMINNPHYLYRMTILRAVSLLAPVMGSEITCSKLLPAVITASKDRVPNIKFNVAKMMQSLIPIVDQAVVENMIRPCLVELSEDPDVDVRYFANQALQSIDNVMMSS 587          
BLAST of DN621546 vs. ExPASy Swiss-Prot
Match: 2AAA_PEA (Protein phosphatase PP2A regulatory subunit A (Fragment) OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.347e-51
Identity = 100/118 (84.75%), Postives = 111/118 (94.07%), Query Frame = -1
Query:  369 EWAMQHIIPQVLEMINNPHYLYRMTILRAISLLAPVMGSEITCSRLLPVVINASKDRVPNIKFNVAKVLQSLIPIVDQSMVEKTIRPCLVELTEDPDVDVRFFATQAIQSIDHVMMSS 722
            EWAMQHIIPQVL+MIN+PHYLYRMTIL AISLLAPV+GSEIT + LLP+V+NASKDRVPNIKFNVAKVLQSLIPIVD+S+VE TIRPCLVEL+EDPDVDVRFFA+QA+QS D V MSS
Sbjct:  278 EWAMQHIIPQVLDMINDPHYLYRMTILHAISLLAPVLGSEITSTNLLPLVVNASKDRVPNIKFNVAKVLQSLIPIVDESVVESTIRPCLVELSEDPDVDVRFFASQALQSSDQVKMSS 395          
BLAST of DN621546 vs. ExPASy Swiss-Prot
Match: 2AAA_ARATH (Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Arabidopsis thaliana GN=PP2AA1 PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.067e-48
Identity = 90/112 (80.36%), Postives = 106/112 (94.64%), Query Frame = -1
Query:  387 EWAMQHIIPQVLEMINNPHYLYRMTILRAISLLAPVMGSEITCSRLLPVVINASKDRVPNIKFNVAKVLQSLIPIVDQSMVEKTIRPCLVELTEDPDVDVRFFATQAIQSID 722
            EWAMQH++PQVL+M+NNPHYL+RM +LRAISL+APVMGSEITCS+ LPVV+ ASKDRVPNIKFNVAK+LQSLIPIVDQS+V+KTIR CLV+L+EDPDVDVR+FA QA+ SID
Sbjct:  470 EWAMQHLVPQVLDMVNNPHYLHRMMVLRAISLMAPVMGSEITCSKFLPVVVEASKDRVPNIKFNVAKLLQSLIPIVDQSVVDKTIRQCLVDLSEDPDVDVRYFANQALNSID 581          
BLAST of DN621546 vs. ExPASy Swiss-Prot
Match: 2AAA_DICDI (Serine/threonine-protein phosphatase 2A regulatory subunit pppA OS=Dictyostelium discoideum GN=pppA PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.165e-25
Identity = 51/109 (46.79%), Postives = 83/109 (76.15%), Query Frame = -1
Query:  396 EWAMQHIIPQVLEMINNPHYLYRMTILRAISLLAPVMGSEITCSRLLPVVINASKDRVPNIKFNVAKVLQSLIPIVDQSMVEKTIRPCLVELTEDPDVDVRFFATQAIQ 722
            +WA  +IIP+VL + ++P+YLYRMT L +IS L+ V+G ++  S ++P++     D+VPNI+FNVAK  Q++IP++D ++V+  ++P LV+L ED D DV+F+A+QA+Q
Sbjct:  474 DWAKNNIIPKVLSLHSHPNYLYRMTTLFSISTLSTVVGGDVISSSMVPLLAKMVSDKVPNIRFNVAKTFQTIIPLLDSTIVQSRVKPLLVKLHEDTDKDVKFYASQALQ 582          
BLAST of DN621546 vs. ExPASy Swiss-Prot
Match: 2AAB_PIG (Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform (Fragment) OS=Sus scrofa GN=PPP2R1B PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.515e-23
Identity = 49/108 (45.37%), Postives = 78/108 (72.22%), Query Frame = -1
Query:  399 EWAMQHIIPQVLEMINNPHYLYRMTILRAISLLAPVMGSEITCSRLLPVVINASKDRVPNIKFNVAKVLQSLIPIVDQSMVEKTIRPCLVELTEDPDVDVRFFATQAI 722
            EWA   I+P+VL M N+P+YL+RMT L  I++L+   G EIT  ++LP+V+  + D+V N++FNVAK LQ + PI+D   +++ ++P L +L +D D+DV++FA +AI
Sbjct:  489 EWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYFAQEAI 596          
BLAST of DN621546 vs. ExPASy Swiss-Prot
Match: 2AAA_PIG (Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Sus scrofa GN=PPP2R1A PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 7.701e-23
Identity = 51/108 (47.22%), Postives = 76/108 (70.37%), Query Frame = -1
Query:  399 EWAMQHIIPQVLEMINNPHYLYRMTILRAISLLAPVMGSEITCSRLLPVVINASKDRVPNIKFNVAKVLQSLIPIVDQSMVEKTIRPCLVELTEDPDVDVRFFATQAI 722
            EWA   IIP+VL M  +P+YL+RMT L  I++L+ V G +IT   +LP V+  + D V N++FNVAK LQ + PI+D S ++  ++P L +LT+D DVDV++FA +A+
Sbjct:  476 EWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQDQDVDVKYFAQEAL 583          
BLAST of DN621546 vs. ExPASy Swiss-Prot
Match: 2AAA_MOUSE (Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Mus musculus GN=Ppp2r1a PE=1 SV=3)

HSP 1 Score: 107.457 bits (267), Expect = 7.701e-23
Identity = 51/108 (47.22%), Postives = 76/108 (70.37%), Query Frame = -1
Query:  399 EWAMQHIIPQVLEMINNPHYLYRMTILRAISLLAPVMGSEITCSRLLPVVINASKDRVPNIKFNVAKVLQSLIPIVDQSMVEKTIRPCLVELTEDPDVDVRFFATQAI 722
            EWA   IIP+VL M  +P+YL+RMT L  I++L+ V G +IT   +LP V+  + D V N++FNVAK LQ + PI+D S ++  ++P L +LT+D DVDV++FA +A+
Sbjct:  476 EWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQDQDVDVKYFAQEAL 583          
BLAST of DN621546 vs. ExPASy Swiss-Prot
Match: 2AAA_HUMAN (Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Homo sapiens GN=PPP2R1A PE=1 SV=4)

HSP 1 Score: 107.457 bits (267), Expect = 7.701e-23
Identity = 51/108 (47.22%), Postives = 76/108 (70.37%), Query Frame = -1
Query:  399 EWAMQHIIPQVLEMINNPHYLYRMTILRAISLLAPVMGSEITCSRLLPVVINASKDRVPNIKFNVAKVLQSLIPIVDQSMVEKTIRPCLVELTEDPDVDVRFFATQAI 722
            EWA   IIP+VL M  +P+YL+RMT L  I++L+ V G +IT   +LP V+  + D V N++FNVAK LQ + PI+D S ++  ++P L +LT+D DVDV++FA +A+
Sbjct:  476 EWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQDQDVDVKYFAQEAL 583          
BLAST of DN621546 vs. ExPASy Swiss-Prot
Match: 2AAB_RAT (Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Rattus norvegicus GN=Ppp2r1b PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.314e-22
Identity = 49/108 (45.37%), Postives = 77/108 (71.30%), Query Frame = -1
Query:  399 EWAMQHIIPQVLEMINNPHYLYRMTILRAISLLAPVMGSEITCSRLLPVVINASKDRVPNIKFNVAKVLQSLIPIVDQSMVEKTIRPCLVELTEDPDVDVRFFATQAI 722
            EWA   I+P+VL M N+P+YL+RMT L  I+ L+   G EIT  ++LP+V+  + D+V N++FNVAK LQ + PI+D + ++  ++P L +L +D D+DV++FA +AI
Sbjct:  488 EWAQNTIVPKVLVMANDPNYLHRMTTLFCINALSEACGKEITTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTNALQGEVKPVLQKLGQDEDMDVKYFAQEAI 595          
The following BLAST results are available for this feature:
BLAST of DN621546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
2AAB_ARATH3.425e-5589.83Serine/threonine-protein phosphatase 2A 65 kDa reg... [more]
2AAG_ARATH4.946e-5486.44Serine/threonine-protein phosphatase 2A 65 kDa reg... [more]
2AAA_PEA1.347e-5184.75Protein phosphatase PP2A regulatory subunit A (Fra... [more]
2AAA_ARATH1.067e-4880.36Serine/threonine-protein phosphatase 2A 65 kDa reg... [more]
2AAA_DICDI2.165e-2546.79Serine/threonine-protein phosphatase 2A regulatory... [more]
2AAB_PIG4.515e-2345.37Serine/threonine-protein phosphatase 2A 65 kDa reg... [more]
2AAA_PIG7.701e-2347.22Serine/threonine-protein phosphatase 2A 65 kDa reg... [more]
2AAA_MOUSE7.701e-2347.22Serine/threonine-protein phosphatase 2A 65 kDa reg... [more]
2AAA_HUMAN7.701e-2347.22Serine/threonine-protein phosphatase 2A 65 kDa reg... [more]
2AAB_RAT1.314e-2245.37Serine/threonine-protein phosphatase 2A 65 kDa reg... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06N19_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006N19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621546 ID=DN621546; Name=DN621546; organism=Citrus sinensis; type=EST; length=722bp
GACAACATTTGCATTCATCAATGAAAATACATTTGCAGGAATCAGTGACT
CAATTGTATGGTGCACCCATCTACAAAAATCATTTCCCTTATAAAAATTG
GAAGAAACGAACACAGAACTGAAACAAAATACAAGCCAAAGACAACGTAT
CTCCGAGTCAATGTGTTGTTTTCTAATAAACTATAACACATAAGTTCAGT
AGCCCAAAATGGCTTTGCACGTTAGTCAGAAGATACAACTGCCCCAACAC
TCAGGCAACAATGATGGCACTAATCTGATGAGCGAAAATTACCATCTCCA
GCTAAAAGGTCTTCAACACTAGTGTACCTTCAGGGGGGGAATTCAAACAA
TAAACTCTGATCAGCCTAGCTAGACATCATCACATGATCAATCGACTGAA
TGGCTTGAGTGGCAAAAAAACGGACATCAACATCTGGATCCTCAGTGAGC
TCAACCAAACAGGGACGGATTGTTTTCTCCACCATAGACTGGTCAACAAT
GGGAATGAGAGACTGTAGCACTTTTGCCACATTAAACTTGATGTTAGGTA
CTCTGTCTTTTGATGCATTAATGACCACTGGCAACAGTCTAGAACATGTG
ATTTCTGATCCCATGACAGGAGCAAGGAGAGAGATGGCACGCAAAATGGT
CATCCGGTACAAGTAGTGGGGATTATTAATCATCTCCAAAACCTGAGGAA
TTATGTGCTGCATTGCCCACTC
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