DN621535

Overview
NameDN621535
Unique NameDN621535
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length657
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11205 contig Csv1_Contig11205:379..1034. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621535 vs. ExPASy Swiss-Prot
Match: VSR1_ARATH (Vacuolar-sorting receptor 1 OS=Arabidopsis thaliana GN=VSR1 PE=1 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 7.406e-51
Identity = 87/136 (63.97%), Postives = 104/136 (76.47%), Query Frame = -3
Query:  254 CVENSLHGCKCPPGFRGDGVNNCEDVDECKEKLACQCPECKCKNTWGSYECSCGSGLLYMQEHDACI--SKDVRSEASWGFVWMVILGLAATGVAGYAFYKYRIRRYMDSEIRAIMAQYMPLDSQAEVQHASHGDV 655
            CV++    CKCP GF+GDGV NCEDVDECKEK  CQCPECKCKNTWGSYECSC +GLLYM+EHD CI   K   ++ SW F+W++I+G+   G++GYA YKYRIR YMD+EIR IMAQYMPL+SQ       H D+
Sbjct:  488 CVDDHSKDCKCPLGFKGDGVKNCEDVDECKEKTVCQCPECKCKNTWGSYECSCSNGLLYMREHDTCIGSGKVGTTKLSWSFLWILIIGVGVAGLSGYAVYKYRIRSYMDAEIRGIMAQYMPLESQPPNTSGHHMDI 623          
BLAST of DN621535 vs. ExPASy Swiss-Prot
Match: VSR2_ARATH (Vacuolar-sorting receptor 2 OS=Arabidopsis thaliana GN=VSR2 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.382e-49
Identity = 81/130 (62.31%), Postives = 100/130 (76.92%), Query Frame = -3
Query:  266 CVENSLHGCKCPPGFRGDGVNNCEDVDECKEKLACQCPECKCKNTWGSYECSCGSGLLYMQEHDACISKDVRSEASWGFVWMVILGLAATGVAGYAFYKYRIRRYMDSEIRAIMAQYMPLDSQAEVQHAS 655
            C ++   GCKCPPGF GDG+  C+DV+EC+EK ACQC +CKCKNTWGSYECSC   LLY++EHD CI++D R + SWG +W++I+GL A  +  Y  YKYRIR YMDSEIRAIMAQYMPLD+    Q +S
Sbjct:  492 CRDDHSKGCKCPPGFIGDGLKECKDVNECEEKTACQCRDCKCKNTWGSYECSCSGSLLYIREHDICINRDARGDFSWGVIWIIIMGLGAAALGAYTVYKYRIRTYMDSEIRAIMAQYMPLDNNPNTQLSS 621          
BLAST of DN621535 vs. ExPASy Swiss-Prot
Match: VSR4_ARATH (Vacuolar-sorting receptor 4 OS=Arabidopsis thaliana GN=VSR4 PE=2 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.307e-47
Identity = 81/134 (60.45%), Postives = 101/134 (75.37%), Query Frame = -3
Query:  257 CVENSLHGCKCPPGFRGDGVNNCEDVDECKEKLACQCPECKCKNTWGSYECSCGSGLLYMQEHDACISK-DVRSEASWGFVWMVILGLAATGVAGYAFYKYRIRRYMDSEIRAIMAQYMPLDSQAEVQHASHGD 655
            CV+     C+CPPGF+GDGV  CED++ECKEK ACQCPEC CKNTWGSYECSC   LLYM++HD CISK   + +++W  VW+++L L       Y  YKYR+R+YMDSEIRAIMAQYMPLDSQ EV + ++ +
Sbjct:  493 CVDKDSVKCECPPGFKGDGVKKCEDINECKEKKACQCPECSCKNTWGSYECSCSGDLLYMRDHDTCISKTGSQVKSAWAAVWLIMLSLGLAAAGAYLVYKYRLRQYMDSEIRAIMAQYMPLDSQPEVPNHTNDE 626          
BLAST of DN621535 vs. ExPASy Swiss-Prot
Match: VSR3_ARATH (Vacuolar-sorting receptor 3 OS=Arabidopsis thaliana GN=VSR3 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.445e-46
Identity = 78/127 (61.42%), Postives = 95/127 (74.80%), Query Frame = -3
Query:  278 CVENSLHGCKCPPGFRGDGVNNCEDVDECKEKLACQCPECKCKNTWGSYECSCGSGLLYMQEHDACISK-DVRSEASWGFVWMVILGLAATGVAGYAFYKYRIRRYMDSEIRAIMAQYMPLDSQAEV 655
            CV+     C+CPPGF+GDG   CED++ECKEK ACQCPEC CKNTWGSYECSC   LLY+++HD CISK   +  ++W  VW+++L L       Y  YKYR+R+YMDSEIRAIMAQYMPLDSQ E+
Sbjct:  493 CVDKDSVKCECPPGFKGDGTKKCEDINECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKTGAQVRSAWAAVWLIMLSLGLAAAGAYLVYKYRLRQYMDSEIRAIMAQYMPLDSQPEI 619          
BLAST of DN621535 vs. ExPASy Swiss-Prot
Match: VSR1_PEA (Vacuolar-sorting receptor 1 OS=Pisum sativum GN=BP80 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.726e-45
Identity = 79/133 (59.40%), Postives = 100/133 (75.19%), Query Frame = -3
Query:  263 CVENSLHGCKCPPGFRGDGVNNCEDVDECKEKLACQCPECKCKNTWGSYECSCGSGLLYMQEHDACISKDV-RSEASWGFVWMVILGLAATGVAGYAFYKYRIRRYMDSEIRAIMAQYMPLDSQAE-VQHASH 655
            C+++    C+CP GF+GDGV NCED+DECK+K ACQCPEC CKNTWGSY CSC   LLY+++ D CISK   +++++W   W+V++ LA     G+  YKYRIR+YMDSEIRAIMAQYMPLDSQ E   H +H
Sbjct:  488 CLDDGGVKCQCPAGFKGDGVKNCEDIDECKDKKACQCPECSCKNTWGSYNCSCSGDLLYIKDQDTCISKTASQAKSTWAAFWVVLIALAMIAGGGFLVYKYRIRQYMDSEIRAIMAQYMPLDSQEEGPNHVNH 620          
BLAST of DN621535 vs. ExPASy Swiss-Prot
Match: VSR7_ARATH (Vacuolar-sorting receptor 7 OS=Arabidopsis thaliana GN=VSR7 PE=2 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 3.021e-36
Identity = 64/123 (52.03%), Postives = 87/123 (70.73%), Query Frame = -3
Query:  287 CVENSLHGCKCPPGFRGDGVNNCEDVDECKEKLACQCPECKCKNTWGSYECSCGSGLLYMQEHDACISKDVRSEASWGFVWMVILGLAATGVAGYAFYKYRIRRYMDSEIRAIMAQYMPLDSQ 655
            C ++   GCKCP GF+GDG+  CED++ECKE+  CQC  C+CKN+WG Y+CSC    LY+ + D CI +   S+ +W   ++++  +A  G+AGY FYKYR R YMDSEI  IM+QYMPL+SQ
Sbjct:  491 CSDSVSTGCKCPEGFQGDGLT-CEDINECKERSVCQCSGCRCKNSWGGYKCSCSGDRLYINDQDTCIER-YGSKTAWWLTFLILAIVAVAGLAGYIFYKYRFRSYMDSEIMTIMSQYMPLESQ 611          
BLAST of DN621535 vs. ExPASy Swiss-Prot
Match: VSR5_ARATH (Vacuolar-sorting receptor 5 OS=Arabidopsis thaliana GN=VSR5 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 5.697e-35
Identity = 63/124 (50.81%), Postives = 84/124 (67.74%), Query Frame = -3
Query:  284 CVENSLHGCKCPPGFRGDGVNNCEDVDECKEKLACQCPECKCKNTWGSYECSCGSGLLYMQEHDACISKDVRSEASWGFVWMVILGLAATGVAGYAFYKYRIRRYMDSEIRAIMAQYMPLDSQA 655
            C ++   GC+CP GF GDG+  CED+DECKEK AC+C  CKCKN WG YEC C +  +YM+E D CI +   S +   F  +V+  +A   +  Y FYKY ++ YMDSEI +IM+QY+PLDSQ+
Sbjct:  489 CSDSETSGCRCPLGFLGDGLK-CEDIDECKEKSACKCDGCKCKNNWGGYECKCSNNSIYMKEEDTCIERRSGSRSRGLFTIVVLTAIAGISLGAYIFYKYHLQSYMDSEIVSIMSQYIPLDSQS 611          
BLAST of DN621535 vs. ExPASy Swiss-Prot
Match: VSR6_ARATH (Vacuolar-sorting receptor 6 OS=Arabidopsis thaliana GN=VSR6 PE=2 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 3.235e-30
Identity = 61/123 (49.59%), Postives = 76/123 (61.79%), Query Frame = -3
Query:  287 CVENSLHGCKCPPGFRGDGVNNCEDVDECKEKLACQCPECKCKNTWGSYECSCGSGLLYMQEHDACISKDVRSEASWGFVWMVILGLAATGVAGYAFYKYRIRRYMDSEIRAIMAQYMPLDSQ 655
            C      GC+CPPGF+GDG+  CE         ACQC  C CKN WG +EC C    LYM+E D CI +   S   W   ++++  +A+  V GY FYKYR+R YMDSEI AIM+QYMPL+SQ
Sbjct:  490 CSNLETSGCRCPPGFKGDGLK-CE---------ACQCDGCNCKNKWGGFECKCSGNRLYMKEQDTCIERS-GSRIGWFPTFVILAAVASICVGGYVFYKYRLRSYMDSEIMAIMSQYMPLESQ 601          
The following BLAST results are available for this feature:
BLAST of DN621535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
VSR1_ARATH7.406e-5163.97Vacuolar-sorting receptor 1 OS=Arabidopsis thalian... [more]
VSR2_ARATH2.382e-4962.31Vacuolar-sorting receptor 2 OS=Arabidopsis thalian... [more]
VSR4_ARATH1.307e-4760.45Vacuolar-sorting receptor 4 OS=Arabidopsis thalian... [more]
VSR3_ARATH1.445e-4661.42Vacuolar-sorting receptor 3 OS=Arabidopsis thalian... [more]
VSR1_PEA2.726e-4559.40Vacuolar-sorting receptor 1 OS=Pisum sativum GN=BP... [more]
VSR7_ARATH3.021e-3652.03Vacuolar-sorting receptor 7 OS=Arabidopsis thalian... [more]
VSR5_ARATH5.697e-3550.81Vacuolar-sorting receptor 5 OS=Arabidopsis thalian... [more]
VSR6_ARATH3.235e-3049.59Vacuolar-sorting receptor 6 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_06N14_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006N14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621535 ID=DN621535; Name=DN621535; organism=Citrus sinensis; type=EST; length=657bp
TTTTTTATCATTAAAACTTTTTCCATTCAATGAAAAATTGACTAGTGCTG
CTGGGCATTATGTTCGTGCGGTTATAATTTAAATAATTTACAAATAAACT
AACTCCACTCACAGTAAATTGTAACGCTAACCGAGCATATAAGCCAGGTA
ATAAATTAAACATTACACCACATAGTATCAATAAGATGTGGATAGAGCAT
TATGTTCTTCTGACATTGTCCCCTTCTTTCTGGGCCGACGGGCCCTGCTC
TTAAACATCACCGTGGGAAGCATGCTGAACCTCTGCTTGACTATCCAATG
GCATGTACTGTGCCATGATGGCCCGTATCTCTGAATCCATGTATCTCCGG
ATTCTGTACTTGTAAAATGCATATCCTGCAACGCCAGTAGCTGCTAAGCC
AAGAATGACCATCCATACAAAGCCCCAGCTAGCCTCCGATCTAACATCTT
TGCTTATGCAGGCGTCATGCTCTTGCATGTACAACAATCCACTGCCACAG
CTGCACTCGTAACTGCCCCATGTATTTTTGCATTTGCACTCTGGGCATTG
ACATGCCAGCTTCTCTTTGCACTCATCCACATCTTCACAGTTGTTGACTC
CATCACCCCTAAATCCAGGTGGACACTTGCAACCATGCAAGCTATTCTCA
ACACAAG
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