DN621534

Overview
NameDN621534
Unique NameDN621534
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11994 contig Csv1_Contig11994:21..697. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621534 vs. ExPASy Swiss-Prot
Match: OPD23_ARATH (Dihydrolipoyllysine-residue acetyltransferase component 3 of pyruvate dehydrogenase complex, mitochondrial OS=Arabidopsis thaliana GN=At1g54220 PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 6.612e-42
Identity = 101/174 (58.05%), Postives = 113/174 (64.94%), Query Frame = 3
Query:  162 MAYASHIINHSKKLKNVSNLLRHENAVLVRWFSND--AVSSRDDLLKIHRHVYVPVESERXXXXXXXXXXXXXXXXXXXXXXXARKAGSPIAGSFLNRGFACSKVQLKRGFSSDSGLPPHQEIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL 677
            MAYAS IINHSKKLK+VS LLR ENA  +R++SN   A  +R+D     R  Y P+E                          +   G PI G    + F+C  +Q  RGFSS S LPPHQEIGMPSLSPTM EGNIARWLKKEGDKV+PGEVLCEVETDKATVEMECMEEGYL
Sbjct:    1 MAYASRIINHSKKLKDVSTLLRRENAATIRYYSNTNRAPLNREDTFN-SRLGYPPLER---ISICSTSTLPVSIIFSTTRSNLSSAMGRPIFG----KEFSCL-MQSARGFSSGSDLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEGYL 165          
BLAST of DN621534 vs. ExPASy Swiss-Prot
Match: OPD22_ARATH (Dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial OS=Arabidopsis thaliana GN=At3g13930 PE=1 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 8.636e-42
Identity = 99/172 (57.56%), Postives = 113/172 (65.70%), Query Frame = 3
Query:  171 ASHIINHSKKLKNVSNLLRHENAVLVRWFSNDAVSS---RDDLLKIHRHVYVPVESERXXXXXXXXXXXXXXXXXXXXXXXARKAGSPIAGSFLNRGFACSKVQLKRGFSSDSGLPPHQEIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL 677
            AS IINHSKKLK+VS LLR ++AV VR FSN    S   R+D+ K   + Y  VE                          + K  SP+AG  L + F  S+++  RGFSS S LPPHQEIGMPSLSPTM EGNIARWLKKEGDKV+PGEVLCEVETDKATVEMECMEEG+L
Sbjct:    2 ASRIINHSKKLKHVSALLRRDHAVAVRCFSNSTHPSLVGREDIFKARLN-YSSVER-------ISKCGTGNVTMLSGISTTSTKLSSPMAGPKLFKEFISSQMRSVRGFSSSSDLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEGFL 165          
BLAST of DN621534 vs. ExPASy Swiss-Prot
Match: OPD21_ARATH (Dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial OS=Arabidopsis thaliana GN=LTA3 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 4.316e-17
Identity = 39/60 (65.00%), Postives = 49/60 (81.67%), Query Frame = 3
Query:  498 SGLPPHQEIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL 677
            S LPPH  + MP+LSPTM +GNIA+W KKEGDK+  G+V+ E+ETDKAT+E E +EEGYL
Sbjct:  207 SDLPPHVVLEMPALSPTMNQGNIAKWWKKEGDKIEVGDVIGEIETDKATLEFESLEEGYL 266          

HSP 2 Score: 83.1889 bits (204), Expect = 1.388e-15
Identity = 37/62 (59.68%), Postives = 46/62 (74.19%), Query Frame = 3
Query:  492 SDSGLPPHQEIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL 677
            S +G      + MP+LSPTM  GN+ +W+KKEGDKV  G+VLCE+ETDKATVE E  EEG+L
Sbjct:   78 SSTGPISQTVLAMPALSPTMSHGNVVKWMKKEGDKVEVGDVLCEIETDKATVEFESQEEGFL 139          
BLAST of DN621534 vs. ExPASy Swiss-Prot
Match: ODP2_HUMAN (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Homo sapiens GN=DLAT PE=1 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 2.142e-16
Identity = 38/58 (65.52%), Postives = 48/58 (82.76%), Query Frame = 3
Query:  504 LPPHQEIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL 677
            LPPHQ++ +PSLSPTMQ G IARW KKEGDK++ G+++ EVETDKATV  E +EE Y+
Sbjct:   88 LPPHQKVPLPSLSPTMQAGTIARWEKKEGDKINEGDLIAEVETDKATVGFESLEECYM 145          

HSP 2 Score: 76.6406 bits (187), Expect = 1.299e-13
Identity = 33/60 (55.00%), Postives = 44/60 (73.33%), Query Frame = 3
Query:  498 SGLPPHQEIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL 677
            S  PPH ++ +P+LSPTM  G + RW KK G+K+S G++L E+ETDKAT+  E  EEGYL
Sbjct:  213 SSYPPHMQVLLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYL 272          
BLAST of DN621534 vs. ExPASy Swiss-Prot
Match: ODP2_RICPR (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Rickettsia prowazekii GN=pdhC PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.797e-16
Identity = 38/53 (71.70%), Postives = 49/53 (92.45%), Query Frame = 3
Query:  519 EIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL 677
            +I MP+LSPTM+EGN+ARWLKKEGDKV+PGEV+ E+ETDKAT+E+E ++EG L
Sbjct:    4 KILMPALSPTMREGNLARWLKKEGDKVNPGEVIAEIETDKATMEVESVDEGIL 56          
BLAST of DN621534 vs. ExPASy Swiss-Prot
Match: ODP2_RAT (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus GN=Dlat PE=1 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 2.797e-16
Identity = 38/58 (65.52%), Postives = 48/58 (82.76%), Query Frame = 3
Query:  504 LPPHQEIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL 677
            LPPHQ++ +PSLSPTMQ G IARW KKEG+K+S G+++ EVETDKATV  E +EE Y+
Sbjct:   79 LPPHQKVPLPSLSPTMQAGTIARWEKKEGEKISEGDLIAEVETDKATVGFESLEECYM 136          

HSP 2 Score: 73.9442 bits (180), Expect = 8.423e-13
Identity = 33/60 (55.00%), Postives = 43/60 (71.67%), Query Frame = 3
Query:  498 SGLPPHQEIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL 677
            S  P H +I +P+LSPTM  G + RW KK G+K+S G++L E+ETDKAT+  E  EEGYL
Sbjct:  203 SSYPVHMQIVLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYL 262          
BLAST of DN621534 vs. ExPASy Swiss-Prot
Match: ODP2_MOUSE (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Mus musculus GN=Dlat PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.797e-16
Identity = 38/58 (65.52%), Postives = 48/58 (82.76%), Query Frame = 3
Query:  504 LPPHQEIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL 677
            LPPHQ++ +PSLSPTMQ G IARW KKEG+K+S G+++ EVETDKATV  E +EE Y+
Sbjct:   87 LPPHQKVPLPSLSPTMQAGTIARWEKKEGEKISEGDLIAEVETDKATVGFESLEECYM 144          

HSP 2 Score: 74.3294 bits (181), Expect = 6.449e-13
Identity = 33/60 (55.00%), Postives = 43/60 (71.67%), Query Frame = 3
Query:  498 SGLPPHQEIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL 677
            S  P H +I +P+LSPTM  G + RW KK G+K+S G++L E+ETDKAT+  E  EEGYL
Sbjct:  212 SSYPTHMQIVLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYL 271          
BLAST of DN621534 vs. ExPASy Swiss-Prot
Match: ODP2_RICCN (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Rickettsia conorii GN=pdhC PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.653e-16
Identity = 38/53 (71.70%), Postives = 48/53 (90.57%), Query Frame = 3
Query:  519 EIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL 677
            +I MP+LSPTM EGN+ARWLKKEGDKV+PGEV+ E+ETDKAT+E+E ++EG L
Sbjct:    4 KILMPALSPTMTEGNLARWLKKEGDKVNPGEVIAEIETDKATMEVEAVDEGIL 56          
BLAST of DN621534 vs. ExPASy Swiss-Prot
Match: ODP2_RICTY (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Rickettsia typhi GN=pdhC PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.232e-16
Identity = 37/53 (69.81%), Postives = 49/53 (92.45%), Query Frame = 3
Query:  519 EIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL 677
            +I MP+LSPTM++GN+ARWLKKEGDKV+PGEV+ E+ETDKAT+E+E ++EG L
Sbjct:    4 KILMPALSPTMKDGNLARWLKKEGDKVNPGEVIAEIETDKATMEVESVDEGIL 56          
BLAST of DN621534 vs. ExPASy Swiss-Prot
Match: ODP2_RICFE (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Rickettsia felis GN=pdhC PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.139e-16
Identity = 38/53 (71.70%), Postives = 47/53 (88.68%), Query Frame = 3
Query:  519 EIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL 677
            +I MP LSPTM EGN+ARWLKKEGDKV+PGEV+ E+ETDKAT+E+E ++EG L
Sbjct:    4 KILMPVLSPTMTEGNLARWLKKEGDKVNPGEVIAEIETDKATMEVEAVDEGIL 56          
The following BLAST results are available for this feature:
BLAST of DN621534 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
OPD23_ARATH6.612e-4258.05Dihydrolipoyllysine-residue acetyltransferase comp... [more]
OPD22_ARATH8.636e-4257.56Dihydrolipoyllysine-residue acetyltransferase comp... [more]
OPD21_ARATH4.316e-1765.00Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_HUMAN2.142e-1665.52Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_RICPR2.797e-1671.70Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_RAT2.797e-1665.52Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_MOUSE2.797e-1665.52Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_RICCN3.653e-1671.70Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_RICTY6.232e-1669.81Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_RICFE8.139e-1671.70Dihydrolipoyllysine-residue acetyltransferase comp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06N13_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006N13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621534 ID=DN621534; Name=DN621534; organism=Citrus sinensis; type=EST; length=677bp
ACGTTTTTAACCAAACTAAATCAGACCCTCTTTGATTCCTACTCTGTTCG
TTCATCTCTCACTAAAAAAGCAATTTAAAAAAAAAAAAACTATTTTTCTT
GCTGAATTTTCATTGCTCTTTTTCTGTTGATTTTTTTTAGTGGTTTTTGG
AAATATTAGTCATGGCGTATGCATCTCACATCATCAATCACTCTAAAAAG
TTGAAGAATGTTTCAAATTTGCTGCGGCATGAGAATGCTGTTTTGGTTCG
TTGGTTTTCAAATGATGCTGTTAGTAGCAGGGATGATCTTCTAAAGATTC
ATCGCCATGTCTATGTGCCTGTGGAGAGTGAAAGAGTCATTAATTCATCC
GCCATTAGCTCTGTATCATCAGTAGGTGTATTTAAGAAAAAAATTTCTAG
TGTGGCAAGAAAAGCCGGAAGTCCCATTGCTGGATCTTTCCTTAACAGAG
GATTTGCATGTTCAAAAGTACAATTGAAGAGAGGATTTTCGTCAGATTCA
GGTCTTCCTCCACACCAGGAGATTGGAATGCCCTCCCTTTCACCCACAAT
GCAAGAGGGTAATATTGCTCGGTGGTTGAAGAAAGAGGGCGACAAGGTGT
CTCCCGGTGAAGTACTCTGTGAAGTTGAAACTGATAAAGCAACTGTTGAG
ATGGAATGTATGGAGGAAGGTTATCTT
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