DN621526

Overview
NameDN621526
Unique NameDN621526
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DN621526 vs. ExPASy Swiss-Prot
Match: HAT5_ARATH (Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana GN=HAT5 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.073e-14
Identity = 60/189 (31.75%), Postives = 82/189 (43.39%), Query Frame = -3 
Query:  195 QLAKELGLQPRQVAIWFQNRRARSRNQRLEKDYDSLKAVYXXXXXXXXXXXXXKQVLQNXXXXXXXXXXXXXXXXXXXETFDAVKLLVAEP--QKPVTSAETKTLFSSVPVVTCKQEDANSAKSDVFDSDSPHYTDGNHS---SLIDPPDSSHYLLKLEDSCCYDD--PPTNSRNFGFSLEDQLFWSWP 740
            QLAK+LGLQPRQVA+WFQNRRAR + ++LE+DYD LK+ Y              Q+L N                   E     +    EP  Q P  +       ++  + T  +  + S  S V D D+P   D   S   S++   D+S+      D  C+ D   PT S +     E   FW WP
Sbjct:   97 QLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSTY-------------DQLLSNYDSIVMDNDKLRSEVTSLTEKLQGKQETANEPPGQVPEPNQLDPVYINAAAIKTEDRLSSGSVGSAVLDDDAPQLLDSCDSYFPSIVPIQDNSNASDHDNDRSCFADVFVPTTSPSHDHHGESLAFWGWP 272
The following BLAST results are available for this feature:
BLAST of DN621526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
HAT5_ARATH3.073e-1431.75Homeobox-leucine zipper protein HAT5 OS=Arabidopsi... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_06N09_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006N09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621526 ID=DN621526; Name=DN621526; organism=Citrus sinensis; type=EST; length=742bp
CCCCTTTTTTTTTTTACCCAAGAAATGCATTATTGATACCGCACCATTGA
TAGTAACCATAATAACAAGTGAGAATCAGCAAATTTTGCACTGCTGAGAA
AAGATATAGAAGCACATGTGCCACGTGACATAGCTTCAGGTGAGGCCAGC
CAATGGCCATGCACTAAAACTGCAGATACACAATTTACTTAGTAAGGCCA
GGACCAGAAGAGCTGATCTTCCAAAGAGAATCCAAAATTCCTAGAATTGG
TTGGTGGGTCGTCATAGCAGCAGGAATCTTCAAGTTTTAATAAGTAGTGC
GAAGAATCAGGAGGATCGATCAAAGATGAATGGTTCCCATCTGTGTAGTG
TGGGCTGTCCGAGTCGAAAACGTCACTCTTGGCTGAATTTGCATCTTCCT
GCTTACAGGTCACCACTGGGACGGAGGAGAACAAAGTTTTAGTCTCAGCG
CTTGTGACTGGTTTTTGAGGTTCTGCCACTAATAACTTGACGGCATCAAA
TGTTTCCAAAATTTCCTTCCCTTTTTCTTTAAGAAGCAACTTATCCTTCA
GCGAAAGAACCTCATTTTGCAAAACTTGCTTCTCCTTGAGGAGGTTGTCA
TAGTCATCCTTGAGCTTATCATAAACAGCTTTCAAAGAATCGTAGTCCTT
TTCAAGTCGTTGGTTCCTGGACCGAGCACGCCGGTTTTGAAACCAAATTG
CAACTTGGCGAGGCTGCAACCCAAGCTCCTTTGCAAGTTGGA
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