DN621485

Overview
NameDN621485
Unique NameDN621485
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10524 contig Csv1_Contig10524:705..1328. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621485 vs. ExPASy Swiss-Prot
Match: HEMH_CUCSA (Ferrochelatase-2, chloroplastic OS=Cucumis sativus GN=HEMH PE=2 SV=1)

HSP 1 Score: 352.443 bits (903), Expect = 1.056e-96
Identity = 176/208 (84.62%), Postives = 186/208 (89.42%), Query Frame = 1
Query:    1 LPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYINSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSR 624
            LPRLFRFLQ PLAKLIS  RAPKSKEGYA+IGGGSPLRKITDEQAQALK AL  KN+  NVYVGMRYWYPFTEEA+QQIKRD ITRLVVLPLYPQ+SISTTGSSIRVLQ +FREDAYLS LPVSII+SWYQREGYI SMADL+Q EL  F  P+EVMIFFSAHGVPVSYVE AGDPY+DQMEECI LIMQ LK RGI N+HTLAYQSR
Sbjct:  147 LPRLFRFLQEPLAKLISTYRAPKSKEGYASIGGGSPLRKITDEQAQALKMALAEKNMSTNVYVGMRYWYPFTEEAIQQIKRDGITRLVVLPLYPQYSISTTGSSIRVLQKMFREDAYLSSLPVSIIKSWYQREGYIKSMADLMQAELKNFANPQEVMIFFSAHGVPVSYVENAGDPYKDQMEECICLIMQELKARGIGNEHTLAYQSR 354          
BLAST of DN621485 vs. ExPASy Swiss-Prot
Match: HEMH1_ARATH (Ferrochelatase-1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=HEM15 PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.023e-91
Identity = 164/208 (78.85%), Postives = 186/208 (89.42%), Query Frame = 1
Query:    1 LPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYINSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSR 624
            LPR F+FLQ  +AK ISVVRAPKSKEGYAAIGGGSPLRKITDEQA A+K +L+AKN+  NVYVGMRYWYPFTEEAVQQIK+D+ITRLVVLPLYPQ+SISTTGSSIRVLQ++FR+D YL+ +PV+II+SWYQR GY+NSMADLI+KEL  F  P+EVMIFFSAHGVPVSYVE AGDPY+ QMEECI LIM+ LK RG+ NDH LAYQSR
Sbjct:  122 LPRPFQFLQGTIAKFISVVRAPKSKEGYAAIGGGSPLRKITDEQADAIKMSLQAKNIAANVYVGMRYWYPFTEEAVQQIKKDKITRLVVLPLYPQYSISTTGSSIRVLQDLFRKDPYLAGVPVAIIKSWYQRRGYVNSMADLIEKELQTFSDPKEVMIFFSAHGVPVSYVENAGDPYQKQMEECIDLIMEELKARGVLNDHKLAYQSR 329          
BLAST of DN621485 vs. ExPASy Swiss-Prot
Match: HEMH_HORVU (Ferrochelatase-2, chloroplastic OS=Hordeum vulgare GN=HEMH PE=2 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 1.336e-91
Identity = 162/208 (77.88%), Postives = 183/208 (87.98%), Query Frame = 1
Query:    1 LPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYINSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSR 624
            LPRLFRFLQ PLAKLIS  RAPKS EGYA+IGGGSPLRKITDEQA ALK AL++KNL  ++YVGMRYWYPFTEEA+ QIK+D+IT+LVVLPLYPQ+SIST+GSSIRVLQNI +ED Y + LP+SII SWYQREGY+ SMADLI+KEL  F  PEEVMIFFSAHGVP++YV+ AGDPYRDQME+CI LIM+ LK RG  NDHTLAYQSR
Sbjct:  141 LPRLFRFLQRPLAKLISTFRAPKSNEGYASIGGGSPLRKITDEQANALKVALKSKNLEADIYVGMRYWYPFTEEAIDQIKKDKITKLVVLPLYPQYSISTSGSSIRVLQNIVKEDPYFAGLPISIIESWYQREGYVKSMADLIEKELSVFSNPEEVMIFFSAHGVPLTYVKDAGDPYRDQMEDCIALIMEELKSRGTLNDHTLAYQSR 348          
BLAST of DN621485 vs. ExPASy Swiss-Prot
Match: HEMH1_ORYSJ (Ferrochelatase-1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os09g0297000 PE=2 SV=1)

HSP 1 Score: 334.724 bits (857), Expect = 2.279e-91
Identity = 163/208 (78.37%), Postives = 182/208 (87.50%), Query Frame = 1
Query:    1 LPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYINSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSR 624
            LPRLFRFLQ PLAKLIS  RAPKSKEGYA+IGGGSPLRKITDEQA ALK AL+ KNL  N+YVGMRYWYPFTEEA+ QIK+D+IT+LVVLPLYPQ+SIST+GSSIRVLQNI +ED+Y + LP+SII SWYQR+GY+ SMADLI+KEL  F  PEEVMIFFSAHGVP++YV  AGDPYRDQME+CI LIM  LK RGI N HTLAYQSR
Sbjct:  139 LPRLFRFLQRPLAKLISTFRAPKSKEGYASIGGGSPLRKITDEQANALKVALKKKNLNANIYVGMRYWYPFTEEAIDQIKKDKITKLVVLPLYPQYSISTSGSSIRVLQNIVKEDSYFAGLPISIIESWYQRDGYVKSMADLIEKELSIFSNPEEVMIFFSAHGVPLTYVTDAGDPYRDQMEDCIALIMGELKSRGILNSHTLAYQSR 346          
BLAST of DN621485 vs. ExPASy Swiss-Prot
Match: HEMH_ORYSI (Ferrochelatase-2, chloroplastic OS=Oryza sativa subsp. indica GN=HEMH PE=2 SV=2)

HSP 1 Score: 306.99 bits (785), Expect = 5.088e-83
Identity = 149/208 (71.63%), Postives = 180/208 (86.54%), Query Frame = 1
Query:    1 LPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYINSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSR 624
            LPRLFRFLQ PLA+ ISVVRAPKSKEGYA+IGGGSPLR+ITD QA+AL+ AL  K++P  VYVGMRYW+PFTEEA++QIKRD IT+LVVLPLYPQFSIST+GSS+R+L+ IFRED YL  +  ++I SWYQREGYI +MA LI+KEL  F +P++VMIFFSAHGVP++YVE+AGDPY+ +MEEC+ LIM+ L+ RGI N  TLAYQSR
Sbjct:  146 LPRLFRFLQKPLAQFISVVRAPKSKEGYASIGGGSPLRQITDAQAEALRKALCDKDIPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLEGIFREDEYLVNMQHTVIPSWYQREGYIKAMATLIEKELRTFSEPQKVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRGITNSCTLAYQSR 353          
BLAST of DN621485 vs. ExPASy Swiss-Prot
Match: HEMH2_ORYSJ (Ferrochelatase-2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os05g0361200 PE=2 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 5.088e-83
Identity = 149/208 (71.63%), Postives = 180/208 (86.54%), Query Frame = 1
Query:    1 LPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYINSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSR 624
            LPRLFRFLQ PLA+ ISVVRAPKSKEGYA+IGGGSPLR+ITD QA+AL+ AL  K++P  VYVGMRYW+PFTEEA++QIKRD IT+LVVLPLYPQFSIST+GSS+R+L+ IFRED YL  +  ++I SWYQREGYI +MA LI+KEL  F +P++VMIFFSAHGVP++YVE+AGDPY+ +MEEC+ LIM+ L+ RGI N  TLAYQSR
Sbjct:  146 LPRLFRFLQKPLAQFISVVRAPKSKEGYASIGGGSPLRQITDAQAEALRKALCDKDIPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLEGIFREDEYLVNMQHTVIPSWYQREGYIKAMATLIEKELRTFSEPQKVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRGITNSCTLAYQSR 353          
BLAST of DN621485 vs. ExPASy Swiss-Prot
Match: HEMH2_ARATH (Ferrochelatase-2, chloroplastic OS=Arabidopsis thaliana GN=At2g30390 PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 3.087e-80
Identity = 144/208 (69.23%), Postives = 174/208 (83.65%), Query Frame = 1
Query:    1 LPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYINSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSR 624
            LP +F+FLQ PLA+ ISV RAPKSKEGYA+IGGGSPLR ITD QA+ L+  L  KN+P  VYVGMRYW+PFTEEA++QIKRD IT+LVVLPLYPQFSIST+GSS+R+L+ IFRED YL  +  ++I SWYQREGYI +MA+LIQ ELGKF  P +V+IFFSAHGVP++YVE+AGDPY+ +MEEC+ LIM+ L  R I N +TLAYQSR
Sbjct:  133 LPPVFQFLQKPLAQFISVARAPKSKEGYASIGGGSPLRHITDAQAEELRKCLWEKNVPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLERIFREDEYLVNMQHTVIPSWYQREGYIKAMANLIQSELGKFGSPNQVVIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELDKRKITNAYTLAYQSR 340          
BLAST of DN621485 vs. ExPASy Swiss-Prot
Match: HEMH_CYAP7 (Ferrochelatase OS=Cyanothece sp. (strain PCC 7424) GN=hemH PE=3 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 1.818e-64
Identity = 122/202 (60.40%), Postives = 156/202 (77.23%), Query Frame = 1
Query:   19 FLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYINSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSR 624
            +LQ PLA LIS +R+ KS+E Y  IGGGSPLRKIT+ QA+AL+  LE     V VY+GMRYW+PFTEEA+ +IKRDRI +LV+LPLYPQFSIST+GSS RVL+ I+++D  L ++  S+I SWY   GY+ +MADLI +ELG++  P+ V IFFSAHGVP SYV++AGDPY+ ++EEC  LIM+ L      ND+TLAYQSR
Sbjct:   40 WLQKPLAWLISTLRSRKSQENYLQIGGGSPLRKITEAQAEALEKRLEEIGHSVQVYIGMRYWHPFTEEAIARIKRDRIQKLVILPLYPQFSISTSGSSFRVLEEIWKQDPSLKQIEYSLIPSWYDNPGYLEAMADLISQELGQYSNPDTVHIFFSAHGVPQSYVDEAGDPYQKEIEECTRLIMKTLNR---PNDYTLAYQSR 238          
BLAST of DN621485 vs. ExPASy Swiss-Prot
Match: HEMH_THEEB (Ferrochelatase OS=Thermosynechococcus elongatus (strain BP-1) GN=hemH PE=3 SV=2)

HSP 1 Score: 238.039 bits (606), Expect = 2.903e-62
Identity = 116/204 (56.86%), Postives = 154/204 (75.49%), Query Frame = 1
Query:   13 FRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYINSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSR 624
            FR+LQ PLA  IS  RA +S+  YA IGGGSPLR+IT++QA+ALK ALE   +  N+Y+GMRYW+PFTEEA+ QIK D+I  LV+LPLYPQFSIST+GSS R+L++++ +D  L ++  ++I SWY   GY+ +MADLI++EL +   P+E +IFFSAHGVP SYV +AGDPY++++E C+ LIM  L      N H LAYQSR
Sbjct:   39 FRWLQKPLAWFISTSRARRSQANYAQIGGGSPLRRITEQQARALKDALEGIGIEANLYIGMRYWHPFTEEAIAQIKADQIRELVILPLYPQFSISTSGSSFRLLESLWNQDPELQKIRYTLIPSWYNHPGYVAAMADLIRQELDRCPNPDEAVIFFSAHGVPKSYVTEAGDPYQEEIEACVRLIMAALNR---PNAHVLAYQSR 239          
BLAST of DN621485 vs. ExPASy Swiss-Prot
Match: HEMH_SYNP6 (Ferrochelatase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=hemH PE=3 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 1.881e-61
Identity = 117/204 (57.35%), Postives = 152/204 (74.51%), Query Frame = 1
Query:   13 FRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYINSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSR 624
            F +LQ PLA LIS +R  KS+E Y  IGGGSPLR+IT+EQA AL+ +L  +     VY+GMRYW+PFTEEA+ QIK D I RLV+LPLYPQFSIST+GSS R+LQ +   D    ++  S++ SWY+R GY+ +MA+LI +EL K ++PE+  +FFSAHGVPVSYVE+AGDPY+ ++E+C   IM+ L   G +N  TLAYQSR
Sbjct:   38 FPWLQKPLAWLISSLRTRKSQENYKQIGGGSPLRRITEEQATALRQSLSDRGQAAQVYIGMRYWHPFTEEAIAQIKADGIDRLVILPLYPQFSISTSGSSFRLLQRLRDRDPEFQKIDCSVVPSWYERSGYLQAMAELIAQELDKLEQPEQGHVFFSAHGVPVSYVEEAGDPYQREIEDCTRKIMETL---GRSNPWTLAYQSR 238          
The following BLAST results are available for this feature:
BLAST of DN621485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 344
Match NameE-valueIdentityDescription
HEMH_CUCSA1.056e-9684.62Ferrochelatase-2, chloroplastic OS=Cucumis sativus... [more]
HEMH1_ARATH1.023e-9178.85Ferrochelatase-1, chloroplastic/mitochondrial OS=A... [more]
HEMH_HORVU1.336e-9177.88Ferrochelatase-2, chloroplastic OS=Hordeum vulgare... [more]
HEMH1_ORYSJ2.279e-9178.37Ferrochelatase-1, chloroplastic OS=Oryza sativa su... [more]
HEMH_ORYSI5.088e-8371.63Ferrochelatase-2, chloroplastic OS=Oryza sativa su... [more]
HEMH2_ORYSJ5.088e-8371.63Ferrochelatase-2, chloroplastic OS=Oryza sativa su... [more]
HEMH2_ARATH3.087e-8069.23Ferrochelatase-2, chloroplastic OS=Arabidopsis tha... [more]
HEMH_CYAP71.818e-6460.40Ferrochelatase OS=Cyanothece sp. (strain PCC 7424)... [more]
HEMH_THEEB2.903e-6256.86Ferrochelatase OS=Thermosynechococcus elongatus (s... [more]
HEMH_SYNP61.881e-6157.35Ferrochelatase OS=Synechococcus sp. (strain ATCC 2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06M11_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006M11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621485 ID=DN621485; Name=DN621485; organism=Citrus sinensis; type=EST; length=624bp
CTTCCCAGGCTGTTTCGGTTTCTTCAGTGGCCCTTGGCAAAGTTGATTTC
TGTGGTACGGGCTCCCAAAAGTAAAGAAGGATATGCTGCCATAGGAGGTG
GCTCACCATTGCGCAAAATAACAGATGAGCAGGCACAAGCACTTAAAACA
GCTTTAGAAGCCAAAAACTTGCCCGTAAATGTCTATGTTGGAATGCGTTA
TTGGTATCCATTTACTGAAGAAGCTGTTCAGCAGATTAAAAGGGACAGAA
TTACAAGGCTCGTTGTGCTGCCACTTTATCCACAATTCTCTATCTCTACA
ACGGGGTCAAGCATCCGTGTTCTCCAGAATATATTTAGGGAAGATGCATA
TCTATCGAGGCTGCCTGTGTCTATTATAAGGTCCTGGTATCAACGAGAAG
GATACATCAACTCTATGGCTGACTTGATTCAGAAAGAGCTAGGGAAGTTC
CAAAAACCTGAGGAGGTTATGATATTCTTCAGTGCCCATGGTGTACCTGT
CAGTTATGTTGAGAAAGCTGGTGATCCATACAGAGATCAGATGGAAGAGT
GTATCTACCTAATCATGCAGAGGTTGAAAGATAGAGGAATCAACAATGAT
CATACTTTGGCATACCAGAGTCGA
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