DN621470

Overview
NameDN621470
Unique NameDN621470
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length782
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6245 contig Csv1_Contig6245:434..1214. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621470 vs. ExPASy Swiss-Prot
Match: NIFU4_ARATH (NifU-like protein 4, mitochondrial OS=Arabidopsis thaliana GN=NIFU4 PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.536e-67
Identity = 125/144 (86.81%), Postives = 134/144 (93.06%), Query Frame = -1
Query:  351 SDFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSVEQELDAEDEVATLAGQM 782
            SDF+TVTKS+D SWD+LKPEIFAA+MDFYSSGQPLFLDS+ AAAKDTAI+EDDSETVAMIKELLETRIRPAVQDDGGDIEY GFDPE+G VKLRMQGACSGCPSSSVTLKSGIENMLMHYV EVK VEQE D EDE  TL+G+M
Sbjct:  137 SDFVTVTKSDDVSWDILKPEIFAAVMDFYSSGQPLFLDSQAAAAKDTAISEDDSETVAMIKELLETRIRPAVQDDGGDIEYCGFDPESGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVSEVKGVEQEFDGEDEEGTLSGEM 280          
BLAST of DN621470 vs. ExPASy Swiss-Prot
Match: NIFU5_ARATH (NifU-like protein 5, mitochondrial OS=Arabidopsis thaliana GN=NIFU5 PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 5.114e-63
Identity = 119/145 (82.07%), Postives = 130/145 (89.66%), Query Frame = -1
Query:  348 SDFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSVEQELDAEDEVATLAGQME 782
            SDF+TVTKS+D +WD+LKP+IFA +MDFYSSGQPLFLDS+  AAKDTAI+EDDSETVAMIKELLETRIRP+VQDDGGDIEY GFD ETG VKLRMQGACSGCPSSSVTLKSGIENMLMHYV EVK VEQE D E+E  T +G ME
Sbjct:  132 SDFVTVTKSDDVTWDILKPDIFAVVMDFYSSGQPLFLDSQATAAKDTAIHEDDSETVAMIKELLETRIRPSVQDDGGDIEYCGFDTETGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVSEVKGVEQEFDGEEE-GTSSGPME 275          
BLAST of DN621470 vs. ExPASy Swiss-Prot
Match: NFU1_DROAN (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila ananassae GN=GF20932 PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.448e-41
Identity = 84/138 (60.87%), Postives = 106/138 (76.81%), Query Frame = -1
Query:  369 SDFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSVEQELDAEDEVA 782
            +DFIT++K E   W L+KPE+FA IMDF++SG P+  +S   A  DT I EDD ETV MIKELL+TRIRP VQ+DGGDI + G+  E G VKL+MQG+CS CPSS VTLK+G++NML  Y+PEV+SVEQ  DA D++A
Sbjct:  125 ADFITISKEEGAEWSLIKPEVFAVIMDFFASGLPILHESTPNA--DTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGY--ENGIVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEVESVEQVFDAVDKMA 258          
BLAST of DN621470 vs. ExPASy Swiss-Prot
Match: YH9J_SCHPO (NifU-like protein C1709.19c OS=Schizosaccharomyces pombe GN=SPBC1709.19c PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.502e-41
Identity = 78/137 (56.93%), Postives = 104/137 (75.91%), Query Frame = -1
Query:  369 DFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSVEQELDAEDEVA 779
            DFITV+K   T W  +KPE+F+ IM+  S+G P+  +     A DT I E DS+ VAMIKEL+ET IRP++Q+DGGD+E+RGFD +TGTV L+++GAC  C SS+VTLK+GI+ ML HY+PEV++V Q LD E+EVA
Sbjct:  103 DFITVSKGAGTEWAQMKPEVFSVIMEHLSNGSPVLSEEPLKGASDTQILESDSQIVAMIKELIETSIRPSIQEDGGDVEFRGFDEKTGTVSLKLRGACRTCSSSAVTLKNGIQQMLKHYIPEVENVVQVLDPEEEVA 239          
BLAST of DN621470 vs. ExPASy Swiss-Prot
Match: NFU1_DROSI (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila simulans GN=GD15490 PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.502e-41
Identity = 82/137 (59.85%), Postives = 104/137 (75.91%), Query Frame = -1
Query:  372 SDFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSVEQELDAEDEV 782
            +DFIT++K E   W L+KPE+FA IMDF++SG P+  D++  A  DT I EDD ETV MIKELL+TRIRP VQ+DGGDI + G+  E G VKL+MQG+CS CPSS VTLK+G++NML  Y+PEV+SVEQ  D  D +
Sbjct:  125 ADFITISKQEGAEWSLIKPEVFAVIMDFFASGLPVLNDAQPNA--DTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGY--EAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEVESVEQVFDEADRM 257          
BLAST of DN621470 vs. ExPASy Swiss-Prot
Match: NFU1_DROSE (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila sechellia GN=GM13534 PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.502e-41
Identity = 82/137 (59.85%), Postives = 104/137 (75.91%), Query Frame = -1
Query:  372 SDFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSVEQELDAEDEV 782
            +DFIT++K E   W L+KPE+FA IMDF++SG P+  D++  A  DT I EDD ETV MIKELL+TRIRP VQ+DGGDI + G+  E G VKL+MQG+CS CPSS VTLK+G++NML  Y+PEV+SVEQ  D  D +
Sbjct:  125 ADFITISKQEGAEWSLIKPEVFAVIMDFFASGLPVLNDAQPNA--DTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGY--EAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEVESVEQVFDEADRM 257          
BLAST of DN621470 vs. ExPASy Swiss-Prot
Match: NFU1_DROYA (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila yakuba GN=GE15286 PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 7.186e-41
Identity = 81/137 (59.12%), Postives = 104/137 (75.91%), Query Frame = -1
Query:  372 SDFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSVEQELDAEDEV 782
            +DF+T++K E   W L+KPE+FA IMDF++SG P+  D++  A  DT I EDD ETV MIKELL+TRIRP VQ+DGGDI + G+  E G VKL+MQG+CS CPSS VTLK+G++NML  Y+PEV+SVEQ  D  D +
Sbjct:  125 ADFVTISKQEGAEWSLIKPEVFAVIMDFFASGLPVLHDAQPNA--DTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGY--EAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEVESVEQVFDEADRM 257          
BLAST of DN621470 vs. ExPASy Swiss-Prot
Match: NFU1_DROER (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila erecta GN=GG17526 PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 7.186e-41
Identity = 81/137 (59.12%), Postives = 104/137 (75.91%), Query Frame = -1
Query:  372 SDFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSVEQELDAEDEV 782
            +DF+T++K E   W L+KPE+FA IMDF++SG P+  D++  A  DT I EDD ETV MIKELL+TRIRP VQ+DGGDI + G+  E G VKL+MQG+CS CPSS VTLK+G++NML  Y+PEV+SVEQ  D  D +
Sbjct:  125 ADFVTISKQEGAEWSLIKPEVFAVIMDFFASGLPVLHDAQPNA--DTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGY--EAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEVESVEQVFDEADRM 257          
BLAST of DN621470 vs. ExPASy Swiss-Prot
Match: NFU1_DROWI (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila willistoni GN=GK25604 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.226e-40
Identity = 82/138 (59.42%), Postives = 104/138 (75.36%), Query Frame = -1
Query:  369 SDFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSVEQELDAEDEVA 782
            SDFIT++K E   W L+KPE+FA IMDF++SG P+  ++   A  DT I EDD ETV MIKELL+TRIRP VQ+DGGDI +  +D   G VKL+MQG+CS CPSS VTLK+G++NML  Y+PEV+SVEQ  D  D++A
Sbjct:  126 SDFITISKEEAAEWGLIKPEVFAVIMDFFASGLPILHEARNNA--DTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMSYD--NGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEVESVEQVFDEADKMA 259          
BLAST of DN621470 vs. ExPASy Swiss-Prot
Match: NFU1_DROME (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila melanogaster GN=CG32500 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.226e-40
Identity = 81/137 (59.12%), Postives = 104/137 (75.91%), Query Frame = -1
Query:  372 SDFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSVEQELDAEDEV 782
            +DF+T++K E   W L+KPE+FA IMDF++SG P+  D++  A  DT I EDD ETV MIKELL+TRIRP VQ+DGGDI + G+  E G VKL+MQG+CS CPSS VTLK+G++NML  Y+PEV+SVEQ  D  D +
Sbjct:  125 ADFVTISKQEGAEWSLIKPEVFAVIMDFFASGLPVLNDAQPNA--DTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGY--EGGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEVESVEQVFDEADRM 257          
The following BLAST results are available for this feature:
BLAST of DN621470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
NIFU4_ARATH1.536e-6786.81NifU-like protein 4, mitochondrial OS=Arabidopsis ... [more]
NIFU5_ARATH5.114e-6382.07NifU-like protein 5, mitochondrial OS=Arabidopsis ... [more]
NFU1_DROAN1.448e-4160.87NFU1 iron-sulfur cluster scaffold homolog, mitocho... [more]
YH9J_SCHPO5.502e-4156.93NifU-like protein C1709.19c OS=Schizosaccharomyces... [more]
NFU1_DROSI5.502e-4159.85NFU1 iron-sulfur cluster scaffold homolog, mitocho... [more]
NFU1_DROSE5.502e-4159.85NFU1 iron-sulfur cluster scaffold homolog, mitocho... [more]
NFU1_DROYA7.186e-4159.12NFU1 iron-sulfur cluster scaffold homolog, mitocho... [more]
NFU1_DROER7.186e-4159.12NFU1 iron-sulfur cluster scaffold homolog, mitocho... [more]
NFU1_DROWI1.226e-4059.42NFU1 iron-sulfur cluster scaffold homolog, mitocho... [more]
NFU1_DROME1.226e-4059.12NFU1 iron-sulfur cluster scaffold homolog, mitocho... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06M03_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006M03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621470 ID=DN621470; Name=DN621470; organism=Citrus sinensis; type=EST; length=782bp
TTTTTTTTTTTCATCAAATAAACCTTTATTCATATCAATGATCTAGGAGA
AAATTCAAAGACAAGTTCCAGATCCAAAATTTAATAGCCATGTGTGATAC
AAAGAGATAAACAAATAAAAATAAGCCAGCCAACTTTCCTGCAAGTGACC
GTACCACTACATCTCTATGCTATGTGATTGATTGCAATTAGCTTACAGGA
ACATAATAAAATACAGTAATATAAATAAACTTCATTATCGCACAAACATT
ATTTGTTCCTGTACAGAAAGGCATACCACAAGCTCTTTTCATCCACTGAT
TCATCTGTGCATGGTAAGCAAGGAAGTAAAAATAAAAGACACAACTACTC
CATCTGGCCTGCTAATGTTGCAACCTCGTCTTCAGCATCTAATTCTTGCT
CCACACTTTTGACCTCAGGAACATAGTGCATAAGCATATTCTCAATGCCA
GATTTTAATGTGACGGACGAGCTCGGGCAGCCGCTACATGCACCTTGCAT
TCTTAATTTGACTGTTCCTGTTTCCGGATCAAATCCTCTGTACTCAATGT
CCCCACCGTCATCTTGCACAGCTGGCCGAATACGGGTCTCGAGGAGTTCT
TTGATCATTGCAACAGTTTCTGAGTCATCCTCATTAATAGCTGTGTCTTT
GGCTGCTGCAGTTTCTGAGTCTAGAAAAAGTGGTTGCCCTGACGAATAAA
AGTCCATAATTGCAGCAAAAATTTCAGGTTTGAGTAAATCCCAAGAAGTA
TCCTCTGATTTTGTCACAGTGATGAAATCTGA
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