DN621466

Overview
NameDN621466
Unique NameDN621466
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length714
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1497 contig Csv1_Contig1497:357..1070. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621466 vs. ExPASy Swiss-Prot
Match: AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2)

HSP 1 Score: 227.254 bits (578), Expect = 6.510e-59
Identity = 119/153 (77.78%), Postives = 129/153 (84.31%), Query Frame = -3
Query:  254 SSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDSFFHALECEPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 712
            SSQQEYLKLKARYEALQRSQRNLLGE+LGPLNSKELESLERQLDMSLKQIRSTRTQ MLD L +LQ KE  L+EAN+TLKQRLMEG  +N LQ   +A+D GYG +  Q QGD FFH LECEPTLQIGYQ  DPI+V  AGPS+NNYM GWLP
Sbjct:   91 SSQQEYLKLKARYEALQRSQRNLLGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLQDLQRKEHALNEANRTLKQRLMEGSTLN-LQWQQNAQDVGYGRQATQTQGDGFFHPLECEPTLQIGYQ-NDPITVGGAGPSVNNYMAGWLP 241          
BLAST of DN621466 vs. ExPASy Swiss-Prot
Match: MTF1_PEA (MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.501e-55
Identity = 113/156 (72.44%), Postives = 127/156 (81.41%), Query Frame = -3
Query:  254 SSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGL-KPAQPQGDSFFHA--LECEPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 712
            SSQQEYLKLKARYE+LQRSQRNL+GE+LGPL+SK+LE+LERQLD SLKQIRSTRTQ+MLD L +LQ KE LL EAN+ L+QR MEGYQ+N+LQLN SAED GYG        GD  F    +ECEPTLQIGY   DP SVVTAGPS+NNYM GWLP
Sbjct:   93 SSQQEYLKLKARYESLQRSQRNLMGEDLGPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKEHLLCEANRALRQR-MEGYQINSLQLNLSAEDMGYGRHHQGHTHGDELFQVQPIECEPTLQIGYHQGDPGSVVTAGPSMNNYMGGWLP 247          
BLAST of DN621466 vs. ExPASy Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.705e-46
Identity = 101/156 (64.74%), Postives = 120/156 (76.92%), Query Frame = -3
Query:  254 SSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCG-YGLKPAQPQ--GDSFFHALECEPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 712
            SSQQEYLKLK RY+ALQR+QRNLLGE+LGPL++KELESLERQLD SLKQIR+ RTQ+MLD L +LQ KE++L+E NKTL+ RL +GYQ+  LQLNP+ E+   YG    Q Q    +FF  LECEP LQIGYQ       + AGPS+NNYM GWLP
Sbjct:   93 SSQQEYLKLKERYDALQRTQRNLLGEDLGPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLADGYQM-PLQLNPNQEEVDHYGRHHHQQQQHSQAFFQPLECEPILQIGYQGQQ--DGMGAGPSVNNYMLGWLP 245          
BLAST of DN621466 vs. ExPASy Swiss-Prot
Match: AGL9_ARADE (Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.839e-46
Identity = 101/155 (65.16%), Postives = 118/155 (76.13%), Query Frame = -3
Query:  257 SSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQL-NPS-AEDCGYGLKPAQPQGDSFFHALECEPTLQIGYQPADPISVVTAGPSLNNYM-QGWL 712
            SSQQEYLKLK R EALQRSQRNLLGE+LGPL SKELE LERQLD SL+QIRSTRTQ+MLD L +LQ +EQ+L EANKTLK+R  E  Q N  Q+ +PS     GYG +PAQ  G++F+H LECEPTLQIGY     ++  TA  ++NNYM  GWL
Sbjct:   89 SSQQEYLKLKNRVEALQRSQRNLLGEDLGPLGSKELEQLERQLDSSLRQIRSTRTQFMLDQLADLQRREQMLCEANKTLKRRFEESSQANQQQVWDPSNTHAVGYGRQPAQHHGEAFYHPLECEPTLQIGYHSDITMATATAS-TVNNYMPPGWL 242          
BLAST of DN621466 vs. ExPASy Swiss-Prot
Match: AGL9_SINAL (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.839e-45
Identity = 101/158 (63.92%), Postives = 119/158 (75.32%), Query Frame = -3
Query:  254 SSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAED--CGYGLKPAQPQGDS---FFHALECEPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 712
            SSQQEYLKLK RY+ALQR+QRNLLGE+LGPL++KELE LERQLD SLKQIR+ RTQ+MLD L +LQ KE++L+E NKTL+ RL +GYQ+  LQLNP+ ED    YG    Q Q +S   FF  LECEP LQ+GYQ       + AGPS NNYM GWLP
Sbjct:   93 SSQQEYLKLKERYDALQRTQRNLLGEDLGPLSTKELELLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLNETNKTLRLRLADGYQM-PLQLNPNQEDHHVDYGRHDQQQQQNSHHAFFQPLECEPILQMGYQGQQDHG-MEAGPSENNYMLGWLP 248          
BLAST of DN621466 vs. ExPASy Swiss-Prot
Match: AGL9_SOLLC (Agamous-like MADS-box protein AGL9 homolog OS=Solanum lycopersicum GN=TDR5 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.268e-38
Identity = 77/90 (85.56%), Postives = 82/90 (91.11%), Query Frame = -3
Query:  443 SSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVN 712
            SSQQEYLKLK RYEALQRSQRNLLGE+LGPLNSKELESLERQLDMSLKQIRSTRTQ MLD LT+ Q KE  L+EAN+TLKQRLMEG Q+N
Sbjct:   91 SSQQEYLKLKGRYEALQRSQRNLLGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLTDYQRKEHALNEANRTLKQRLMEGSQLN 180          

HSP 2 Score: 31.187 bits (69), Expect = 1.268e-38
Identity = 16/31 (51.61%), Postives = 19/31 (61.29%), Query Frame = -1
Query:  331 VQKIVVMGLNQLNLRAIASFTPWNVNPHCKL 423
            + K+  M   QL LRA+ASF  W VN  CKL
Sbjct:  186 MHKLWAMAGKQLKLRAMASFILWIVNLLCKL 216          
BLAST of DN621466 vs. ExPASy Swiss-Prot
Match: SEP2_ARATH (Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.013e-33
Identity = 81/162 (50.00%), Postives = 104/162 (64.20%), Query Frame = -3
Query:  257 SSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAE-----DCGYGLKPAQPQGDSFFHALECEPTLQIGYQP---ADPISVVTAGPSL--NNYMQGWL 712
            +S +EYLKLK RYE LQR QRNLLGE+LGPLNSKELE LERQLD SLKQ+R  +TQYMLD L++LQ KE +L +AN+ L  +L +   V    +    E     +  YG   A  QG   + +LEC+PTLQIGY     ++ ++V   G S   N Y+ GW+
Sbjct:   90 NSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRALSMKLEDMIGVRHHHIGGGWEGGDQQNIAYGHPQAHSQG--LYQSLECDPTLQIGYSHPVCSEQMAVTVQGQSQQGNGYIPGWM 249          
BLAST of DN621466 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSJ (MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica GN=MADS7 PE=1 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.367e-32
Identity = 82/160 (51.25%), Postives = 107/160 (66.88%), Query Frame = -3
Query:  254 SSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQL-NPSAEDCGYGLKPAQPQ----GDSFFHALEC--EPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 712
            +S+ EYLKLKAR E LQR+QRNLLGE+L  L  KELESLE+QLD SLK +R+TRT++++D LTELQ KEQ++SEAN+ L+++L E   V   Q+        GY  +P   Q    G+ FFH L+   EPTLQIGY PA+    + +   +N YM  WLP
Sbjct:   92 ASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEESNHVRGQQVWEQGCNLIGYERQPEVQQPLHGGNGFFHPLDAAGEPTLQIGY-PAEHHEAMNSA-CMNTYMPPWLP 249          
BLAST of DN621466 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSI (MADS-box transcription factor 7 OS=Oryza sativa subsp. indica GN=MADS7 PE=2 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.367e-32
Identity = 82/160 (51.25%), Postives = 107/160 (66.88%), Query Frame = -3
Query:  254 SSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQL-NPSAEDCGYGLKPAQPQ----GDSFFHALEC--EPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 712
            +S+ EYLKLKAR E LQR+QRNLLGE+L  L  KELESLE+QLD SLK +R+TRT++++D LTELQ KEQ++SEAN+ L+++L E   V   Q+        GY  +P   Q    G+ FFH L+   EPTLQIGY PA+    + +   +N YM  WLP
Sbjct:   92 ASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEESNHVRGQQVWEQGCNLIGYERQPEVQQPLHGGNGFFHPLDAAGEPTLQIGY-PAEHHEAMNSA-CMNTYMPPWLP 249          
BLAST of DN621466 vs. ExPASy Swiss-Prot
Match: SEP1_ARATH (Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1 PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.785e-32
Identity = 80/163 (49.08%), Postives = 104/163 (63.80%), Query Frame = -3
Query:  257 SSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSA------EDCGYGLKPAQPQGDSFFHALECEPTLQIGYQP---ADPISVVTAGPSL--NNYMQGWL 712
            +S +EYLKLK RYE LQR QRNLLGE+LGPLNSKELE LERQLD SLKQ+RS +TQYMLD L++LQ+KEQ+L E N+ L  +L +   V +  +          ++  Y    AQ QG   +  LEC PTLQ+GY     ++ I+  T   +   N Y+ GW+
Sbjct:   90 NSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLDDMIGVRSHHMGGGGGWEGGEQNVTYAHHQAQSQG--LYQPLECNPTLQMGYDNPVCSEQITATTQAQAQQGNGYIPGWM 250          
The following BLAST results are available for this feature:
BLAST of DN621466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
AGL9_PETHY6.510e-5977.78Agamous-like MADS-box protein AGL9 homolog OS=Petu... [more]
MTF1_PEA1.501e-5572.44MADS-box transcription factor 1 OS=Pisum sativum G... [more]
SEP3_ARATH3.705e-4664.74Developmental protein SEPALLATA 3 OS=Arabidopsis t... [more]
AGL9_ARADE4.839e-4665.16Agamous-like MADS-box protein AGL9 homolog OS=Aran... [more]
AGL9_SINAL1.839e-4563.92Agamous-like MADS-box protein AGL9 homolog OS=Sina... [more]
AGL9_SOLLC1.268e-3885.56Agamous-like MADS-box protein AGL9 homolog OS=Sola... [more]
SEP2_ARATH8.013e-3350.00Developmental protein SEPALLATA 2 OS=Arabidopsis t... [more]
MADS7_ORYSJ1.367e-3251.25MADS-box transcription factor 7 OS=Oryza sativa su... [more]
MADS7_ORYSI1.367e-3251.25MADS-box transcription factor 7 OS=Oryza sativa su... [more]
SEP1_ARATH1.785e-3249.08Developmental protein SEPALLATA 1 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06M01_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006M01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621466 ID=DN621466; Name=DN621466; organism=Citrus sinensis; type=EST; length=714bp
TTTTTTTTTTCAAACAAGGCTTTGTTAAATAAAGATAAGCGCGGTGATTG
AAAATACACGCACACACAACATAGCTATATATCGTCATCAGTTTCCCTAA
AGTGCAGGATCACTGTAGAGTTATTATAATAAATCCTTATGATTGCGTGT
TCCTAGTCACTGAATAGGGTTGCTTACAAAGGGATACAAAGTTGCTGATT
CTTATGGATCAACTACAATACATTGACTGGTAATGCCCGCCGCTCTCTTA
GCATGGTAGCCATCCTTGCATGTAATTATTCAGACTCGGGCCTGCTGTGA
CAACCGATATTGGGTCCGCAGGCTGGTATCCAATTTGCAATGTGGGTTCA
CATTCCAAGGCGTGAAAGAAGCTATCGCCCTGAGGTTGAGCTGGTTTAAG
CCCATAACCACAATCTTCTGCACTAGGATTCAATTGAAGTGTGTTCACTT
GGTATCCCTCCATCAACCTTTGTTTGAGGGTCTTATTTGCTTCGCTCAGC
AACTGTTCCTTATGTTGCAGTTCAGTAAGGGTATCCAGCATGTACTGAGT
TCTTGTTGATCTGATCTGCTTCAATGACATATCAAGCTGCCTTTCAAGTG
ACTCAAGCTCTTTGCTGTTTAGAGGGCCAAGTTCTTCTCCAAGGAGATTC
CTTTGGGATCTCTGTAGGGCTTCATATCGTGCTTTAAGCTTCAGATATTC
TTGCTGGCTACTTA
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