DN621459

Overview
NameDN621459
Unique NameDN621459
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DN621459 vs. ExPASy Swiss-Prot
Match: EI2BB_DICDI (Translation initiation factor eIF-2B subunit beta OS=Dictyostelium discoideum GN=eif2b2 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.812e-12
Identity = 32/64 (50.00%), Postives = 42/64 (65.62%), Query Frame = -3 
Query:  453 DFGEFSDCMDFGSGSGSPLLHVVNPAFDYVPPKLVSLFITDAGGHNPSYMYRLIADYYSADDLV 644
            +FG   + + F        +H  NP FDYV P LVSLFIT+ GGHNPSY+YRL+ +YY A D++
Sbjct:  322 NFGSPGEYLKFEEAEFLENVHSYNPTFDYVAPDLVSLFITNIGGHNPSYIYRLLQEYYDARDIL 385
The following BLAST results are available for this feature:
BLAST of DN621459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
EI2BB_DICDI6.812e-1250.00Translation initiation factor eIF-2B subunit beta ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_06L21_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006L21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621459 ID=DN621459; Name=DN621459; organism=Citrus sinensis; type=EST; length=664bp
TTTTTTTTTTTTTTATTCTAGGAAACATCTCAACAGCTACATTCTGCTAT
GAAAATTTTAAGCAACAAGCAATACAACAATGTTATACCGTCCGTCTGAA
AATCACTGATGAAGAAGAATACAGCACTTGACCACCAACCTTGATACAAT
CAAAAAATATTATCTAACCGTATCCACCTTTTTATCTCAGTACAACTCTT
AGCCTCTATTTTACATTTTAATATTTCTGCCAACAAAAATTATCCTATCA
TTGTTTGCGTCCCTAAAATTTGCACAAGTTCACACCATTGCCTCGCAATC
GCTATGTCCCTGAGTTCTTTTACAGCATCAGCTCAGCTCCAAATTCAGTG
ATTTGAAATTTCTCAAACCCAAAGCTAATGCTCTTGCCGTAATAAATTCA
CAATAGATGATACAAACCAAAATCAATTCCCAGCAGTAGCTCTTCGCTGC
ACAACCAAGTCATCAGCCGAGTAATAATCAGCAATCAACCGATACATGTA
TGAAGGATTGTGCCCTCCCGCGTCAGTAATAAAAAGACTAACAAGTTTCG
GTGGAACATAGTCAAATGCTGGATTGACCACATGAAGAAGAGGGGAACCA
CTGCCACTCCCAAAATCCATGCAGTCTGAGAATTCTCCAAAGTCCAGCAG
CTCTGATGGGGATC
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