DN621430

Overview
NameDN621430
Unique NameDN621430
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length639
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6050 contig Csv1_Contig6050:1063..1701. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of DN621430 vs. ExPASy Swiss-Prot
Match: BAHD1_ARATH (BAHD acyltransferase At5g47980 OS=Arabidopsis thaliana GN=BAHD1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.438e-11
Identity = 47/140 (33.57%), Postives = 74/140 (52.86%), Query Frame = -1 
Query:  211 EMELQELVCKLRKAKDEFSN------NG--IQTLLETKSILNVSESTRDKFERDEIDFFSFTSMISFPVHEGADFGWGKPIHVTFPNYTTPN---VVILVSTEDGAGIEAFVYLSPEDMPIFERSQELLSFATLNPPVQV 597
            E+E+ E+V + RK K+EF+       NG    T L  K +  ++    +   +  ID ++ +S      +E  DFGWG+P  V   +    +    V+LV  +DG G+E +V +  +DM  F   QELLS+A+LNPPV +
Sbjct:  307 EIEISEVVAEFRKEKEEFNEMIKENVNGGHTNTTLGQKIMSGIANYMSEL--KPNIDTYTMSSWCRKAFYE-VDFGWGRPAWVGLGHQDIQDGVMYVLLVDAKDGEGVEVWVGIPEQDMAAFVCDQELLSYASLNPPVLI 443
The following BLAST results are available for this feature:
BLAST of DN621430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
BAHD1_ARATH1.438e-1133.57BAHD acyltransferase At5g47980 OS=Arabidopsis thal... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_06L05_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006L05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621430 ID=DN621430; Name=DN621430; organism=Citrus sinensis; type=EST; length=639bp
AATAAATAGTAAATTTAAGTGATGAACAAACGACCAAATCACAGACACAC
GCATGCGACGACCAATTGACCAACCAAATCGCAAAGCACTGCAACAATCA
ACTGGCCGCCGACGCCTAGTCGTGCTACACTCAGGGAGCGGCAACGCCAA
CATGTTATATGCGAATCAAAGGGAAGACTTCGAGGCAAAGGACCCTTTTT
CCTTTTCATTCACTTGGACAGGTGGATTAAGAGTAGCAAATGAAAGCAGC
TCTTGGCTGCGTTCAAAAATGGGCATGTCCTCTGGGCTCAAATACACGAA
TGCTTCTATTCCTGCACCATCTTCTGTGCTCACAAGTATAACTACGTTCG
GTGTCGTATAATTTGGGAAAGTCACATGTATTGGCTTTCCCCATCCGAAA
TCTGCTCCTTCGTGAACGGGAAAGCTAATCATGCTGGTGAAAGAGAAGAA
ATCGATCTCATCTCTTTCAAACTTGTCTCTAGTTGACTCTGAAACATTGA
GTATGCTCTTGGTTTCTAGCAAAGTTTGTATACCGTTATTGCTGAATTCA
TCCTTTGCTTTCCTGAGTTTACAAACCAATTCTTGTAATTCCATCTCCTT
CTCACTCGTTTGGGCAGGCATAAACCCTATGCTATTACC
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