DN621427
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN621427 vs. ExPASy Swiss-Prot
Match: PDCD2_RAT (Programmed cell death protein 2 (Fragment) OS=Rattus norvegicus GN=Pdcd2 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.305e-28 Identity = 69/205 (33.66%), Postives = 100/205 (48.78%), Query Frame = -3 Query: 127 CRRAHYCQQKHQVTHWRSGHKVECQKLXXXXXXXXXXXXXAGTTSVASNSLWPEYEMINEDESEYDTEMSEVNGQTNALVSKTGVDDTMKSLLDSFEGDSDRRSWATFQEHVAKAPEQVLRYCRSAGAKALWPTSSGQLSKADIPKCSYCGGPRCFEFQILPQLLFYFGVSNDVDSLDWATMVVYTCESSCEANVSYKEEFVWVQ 741 C++AHYC ++HQ W+ GHK C + N L+PE+E++ E E E E+ E+ + + S GV + + E D + F+ +A PEQ+LRY R G K +W + + DIP CS CG R FEFQ++PQLL + S+DW + V+TC SC + + EEFVW Q Sbjct: 92 CKQAHYCSKEHQTLDWQLGHKQACTQSDHLDHMVPDH-----------NLLFPEFEIVTETEDEIGPEVVEMEDYSEVIGSMEGVPEEELDSMAKHESKEDH-IFQKFKSKIALEPEQILRYGR--GIKPIWISGENIPQEKDIPDCS-CGVKRIFEFQVMPQLLNHLKADRLGTSVDWGILAVFTCAESCSLGIGFTEEFVWKQ 281
BLAST of DN621427 vs. ExPASy Swiss-Prot
Match: PDCD2_MOUSE (Programmed cell death protein 2 OS=Mus musculus GN=Pdcd2 PE=2 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 6.474e-28 Identity = 69/205 (33.66%), Postives = 97/205 (47.32%), Query Frame = -3 Query: 127 CRRAHYCQQKHQVTHWRSGHKVECQKLXXXXXXXXXXXXXAGTTSVASNSLWPEYEMINEDESEYDTEMSEVNGQTNALVSKTGVDDTMKSLLDSFEGDSDRRSWATFQEHVAKAPEQVLRYCRSAGAKALWPTSSGQLSKADIPKCSYCGGPRCFEFQILPQLLFYFGVSNDVDSLDWATMVVYTCESSCEANVSYKEEFVWVQ 741 C++AHYC ++HQ WR GHK C + N L+PE+E++ E E E E+ E+ + S G+ + + E D + F+ +A PEQ+LRY R G K +W + + DIP C CG R FEFQ++PQLL + S+DW + V+TC SC Y EEFVW Q Sbjct: 148 CKQAHYCSKEHQTLDWRLGHKQACTQSDKIDHMVPDH-----------NFLFPEFEIVTETEDEILPEVVEMEDYSEVTGSMGGIPEEELDSMAKHESKEDH-IFQKFKSKIALEPEQILRYGR--GIKPIWISGENIPQEKDIPDCP-CGAKRIFEFQVMPQLLNHLKADRLGRSIDWGVLAVFTCAESCSLGSGYTEEFVWKQ 337
BLAST of DN621427 vs. ExPASy Swiss-Prot
Match: PDCD2_BOVIN (Programmed cell death protein 2 OS=Bos taurus GN=PDCD2 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.481e-27 Identity = 67/205 (32.68%), Postives = 98/205 (47.80%), Query Frame = -3 Query: 127 CRRAHYCQQKHQVTHWRSGHKVECQKLXXXXXXXXXXXXXAGTTSVASNSLWPEYEMINEDESEYDTEMSEVNGQTNALVSKTGVDDTMKSLLDSFEGDSDRRSWATFQEHVAKAPEQVLRYCRSAGAKALWPTSSGQLSKADIPKCSYCGGPRCFEFQILPQLLFYFGVSNDVDSLDWATMVVYTCESSCEANVSYKEEFVWVQ 741 C +AHYC ++HQ WR GHK C + N L+PE+E++ E E E E+ E + ++ + + + + E DR + F+ ++ PEQ+LRY R G LW + + DIP C CG R FEFQ++PQLL Y S+DW + ++TC SC+ + Y EEFVW Q Sbjct: 149 CHKAHYCSKEHQSLDWRLGHKQACAQTDNLDNIVPDH-----------NFLFPEFEIVIETEDEIMPEVVERDDESEIIGTMGEAHEEELESMAKHESKEDR-IFRKFKTKISLEPEQILRYGR--GIAPLWISGENTPKEKDIPDCP-CGAKRLFEFQVMPQLLNYLKADRLGRSVDWGVLAIFTCAESCKLGIGYTEEFVWKQ 338
BLAST of DN621427 vs. ExPASy Swiss-Prot
Match: PDCD2_HUMAN (Programmed cell death protein 2 OS=Homo sapiens GN=PDCD2 PE=1 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.763e-25 Identity = 68/207 (32.85%), Postives = 96/207 (46.38%), Query Frame = -3 Query: 127 CRRAHYCQQKHQVTHWRSGHKVECQKLXXXXXXXXXXXXXAGTTSVASNSLWPEYEMINEDESEYDTEMSEVNGQTNALVSKTGVDDTMKSLLDSFEGDSDRRS--WATFQEHVAKAPEQVLRYCRSAGAKALWPTSSGQLSKADIPKCSYCGGPRCFEFQILPQLLFYFGVSNDVDSLDWATMVVYTCESSCEANVSYKEEFVWVQ 741 C +A+YC ++HQ WR GHK C + N L+PE+E++ E E E E+ E + + S + + ++ LDS R + F+ +A PEQ+LRY R G +W + + DIP C CG R EFQ++PQLL Y S+DW + V+TC SC Y EEFVW Q Sbjct: 149 CHKAYYCSKEHQTLDWRLGHKQACAQPDHLDHIIPDH-----------NFLFPEFEIVIETEDEIMPEVVEKEDYSEIIGS---MGEALEEELDSMAKHESREDKIFQKFKTQIALEPEQILRYGR--GIAPIWISGENIPQEKDIPDCP-CGAKRILEFQVMPQLLNYLKADRLGKSIDWGILAVFTCAESCSLGTGYTEEFVWKQ 338
BLAST of DN621427 vs. ExPASy Swiss-Prot
Match: YA99_SCHPO (Uncharacterized protein C13G6.09 OS=Schizosaccharomyces pombe GN=SPAC13G6.09 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.883e-13 Identity = 46/154 (29.87%), Postives = 76/154 (49.35%), Query Frame = -3 Query: 127 EMINEDESEYDTEMSEVNGQTNALVSKTGVDDTMKSLLDSFEGDSDRRSWATFQEHVAKAPEQVLRYCRSAGAK--ALWPTSSGQLSKADIPKCSYCGGPRCFEFQILPQLLFYFGVSNDV-DSLDWATMVVYTCESSCE-ANVSYKEEFVWVQ 576 ++I+ E E D E E N + K DT + + S+ FQ+ +++AP+Q++RY + + LW + + + IP C+ CG R EFQILP L+ + + ++LDW + +Y C +SC+ AN EE W+Q Sbjct: 113 KLIDSSEIEVDAEPKEENKKEIPEKLKNVKVDTENPSAEPYTKAKGDVSFLKFQKRLSRAPDQIMRYYHATSNEFPGLW--CNNECIPSSIPNCA-CGAKRQLEFQILPTLISSMNIDHSAKNALDWGILSIYVCSASCDLANCGLAEELCWLQ 263 The following BLAST results are available for this feature:
BLAST of DN621427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN621427 ID=DN621427; Name=DN621427; organism=Citrus sinensis; type=EST; length=746bpback to top |