DN621422
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN621422 vs. ExPASy Swiss-Prot
Match: HDDC2_BOVIN (HD domain-containing protein 2 OS=Bos taurus GN=HDDC2 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.516e-12 Identity = 41/102 (40.20%), Postives = 61/102 (59.80%), Query Frame = -1 Query: 340 RMEQEALNEMCKVLGGGMRAEEIQELWAEYENNASIEANLVKDFDKVEMILQALEYEMEHGKV--LDEFFLSTAGKFQTEIGKRWAAEINSRRNSRLANKLS 639 R E+EA+ ++ ++L ++ +E+ ELW EYE +S EA VK D+ EMILQA EYE K L +F+ STAGKF + +E+ + RN+ +A S Sbjct: 101 RREEEAMKQLTQLLPEDLQ-KELYELWEEYETQSSAEAKFVKQLDQCEMILQASEYEDLENKPGRLQDFYDSTAGKFSHPEIVQLVSELEAERNANIAGAAS 201
BLAST of DN621422 vs. ExPASy Swiss-Prot
Match: HDDC2_MOUSE (HD domain-containing protein 2 OS=Mus musculus GN=Hddc2 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.453e-11 Identity = 41/98 (41.84%), Postives = 60/98 (61.22%), Query Frame = -1 Query: 352 RMEQEALNEMCKVLGGGMRAEEIQELWAEYENNASIEANLVKDFDKVEMILQALEYEMEHGKV--LDEFFLSTAGKFQTEIGKRWAAEINSRRNSRLA 639 R E+EA+ ++ ++L +R +E+ ELW EYE +S EA VK D+ EMILQA EYE K L +F+ STAGKF + +E+ + RN+ +A Sbjct: 95 RREEEAMKQITQLLPEDLR-KELYELWEEYETQSSEEAKFVKQLDQCEMILQASEYEDLENKPGRLQDFYDSTAGKFSHPEIVQLVSELETERNASMA 191
BLAST of DN621422 vs. ExPASy Swiss-Prot
Match: HDDC2_HUMAN (HD domain-containing protein 2 OS=Homo sapiens GN=HDDC2 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.453e-11 Identity = 42/99 (42.42%), Postives = 64/99 (64.65%), Query Frame = -1 Query: 352 RMEQEALNEMCKVLGGGMRAEEIQELWAEYENNASIEANLVKDFDKVEMILQALEYE-MEH--GKVLDEFFLSTAGKFQTEIGKRWAAEINSRRNSRLA 639 R E+EA+ ++ ++L +R +E+ ELW EYE +S EA VK D+ EMILQA EYE +EH G+ L +F+ STAGKF + +E+ + R++ +A Sbjct: 100 RREEEAMKQITQLLPEDLR-KELYELWEEYETQSSAEAKFVKQLDQCEMILQASEYEDLEHKPGR-LQDFYDSTAGKFNHPEIVQLVSELEAERSTNIA 196
BLAST of DN621422 vs. ExPASy Swiss-Prot
Match: HDDC2_DICDI (HD domain-containing protein 2 homolog OS=Dictyostelium discoideum GN=hddc2 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.478e-11 Identity = 43/96 (44.79%), Postives = 58/96 (60.42%), Query Frame = -1 Query: 367 RMEQEALNEMCKVLGGGMRAEEIQELWAEYENNASIEANLVKDFDKVEMILQALEYE-----MEHGKVLDEFFLSTAGKFQTEIGKRWAAEINSRR 639 ++E+ A+ E+ L G + +EI +LW EYE+ + EA LVKDFDK EMILQA EYE +E+ L FF ST GKF + K A ++ S R Sbjct: 95 QLEKNAIIEITNTLSGEV-GKEIFDLWQEYEDCKTNEALLVKDFDKFEMILQAYEYEKQPHQLENKIKLQSFFDSTRGKFHHPLFKSLALQLESDR 189
BLAST of DN621422 vs. ExPASy Swiss-Prot
Match: HDDC2_DANRE (HD domain-containing protein 2 OS=Danio rerio GN=hddc2 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.478e-11 Identity = 39/77 (50.65%), Postives = 51/77 (66.23%), Query Frame = -1 Query: 415 RMEQEALNEMCKVLGGGMRAEEIQELWAEYENNASIEANLVKDFDKVEMILQALEYEMEHGKV--LDEFFLSTAGKF 639 R E++A+ + +L G+R +EI LW EYE +S EA LVK+ D +EMI+QA EYE GK L EFF+ST GKF Sbjct: 87 RREKDAMVHITGLLDDGLR-KEIYNLWEEYETQSSPEAKLVKELDNLEMIIQAHEYEELEGKPGRLQEFFVSTEGKF 162 The following BLAST results are available for this feature:
BLAST of DN621422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN621422 ID=DN621422; Name=DN621422; organism=Citrus sinensis; type=EST; length=642bpback to top |