DN621408

Overview
NameDN621408
Unique NameDN621408
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length726
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6049 contig Csv1_Contig6049:1..726. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621408 vs. ExPASy Swiss-Prot
Match: ANTR4_ARATH (Probable anion transporter 4, chloroplastic OS=Arabidopsis thaliana GN=ANTR4 PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.444e-69
Identity = 129/148 (87.16%), Postives = 139/148 (93.92%), Query Frame = 2
Query:  278 PNFLEFITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPXTERARAVAIAMGGF 721
            PNF EFITSERVKVV+MLALALALCNADRVVMSVAIVPLSL+ GWS+SFSGIVQSSFLWGYL+SPIAGGTLVD YGGK++MAWGVALWSLATFLTPWAAD+SL ALLA RA+VG+AEGVALP MNNMVARWFP TER+RAV IAM GF
Sbjct:  101 PNFSEFITSERVKVVAMLALALALCNADRVVMSVAIVPLSLSRGWSKSFSGIVQSSFLWGYLISPIAGGTLVDRYGGKVVMAWGVALWSLATFLTPWAADSSLWALLAARAMVGVAEGVALPCMNNMVARWFPPTERSRAVGIAMAGF 248          
BLAST of DN621408 vs. ExPASy Swiss-Prot
Match: PHT43_ORYSJ (Probable anion transporter 3, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;3 PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.497e-58
Identity = 110/144 (76.39%), Postives = 125/144 (86.81%), Query Frame = 2
Query:  290 EFITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPXTERARAVAIAMGGF 721
            EF+TSERVKV +ML LALALCNADRVVMSVAIVPLS A+GW+ SF+G+VQSSFLWGYLVSPI GG LVDYYGGK +MA+GVALWSLATFL+PWAA  SL   L+ R ++G+AEGVALP+MNNMV RWFP TER+ AV IAM GF
Sbjct:   91 EFVTSERVKVAAMLGLALALCNADRVVMSVAIVPLSQAYGWTPSFAGVVQSSFLWGYLVSPIIGGALVDYYGGKRVMAYGVALWSLATFLSPWAAARSLWLFLSTRVLLGMAEGVALPSMNNMVLRWFPRTERSSAVGIAMAGF 234          
BLAST of DN621408 vs. ExPASy Swiss-Prot
Match: ANTR3_ARATH (Probable anion transporter 3, chloroplastic OS=Arabidopsis thaliana GN=ANTR3 PE=2 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 4.087e-48
Identity = 116/245 (47.35%), Postives = 148/245 (60.41%), Query Frame = 2
Query:   14 LNMSSCSLS-PYRPI--------YVHINNKFIGIKSINLQFSSQFPYKSTNRKLFRNVSSNSGSVGLRTIVGCRVRTGVSSNDKSFDLAPNEDEALAPNFLEFITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPXTERARAVAIAMGGF 721
            L+ SSCS S P  PI        +V  + +   I+  NL++SS+   K       RN ++   +          V TG   +           EA+A   +  +  ER+KVV + A  + LCNADRVVMSVA+VPL+   GWS SF G+VQSSFLWGY+ S + GG LVD YGGK ++AWGVALWSLAT LTPWAA  S LALL +RA  GLAEGVA+P+M  +++RWFP  ERA AV I+M GF
Sbjct:   10 LHHSSCSSSFPRNPIVNRKALLGFVFDSARKNQIRCENLRYSSESDGKR------RNAAAKKRNQSPERCAAEGVLTGGGGS-----------EAIAE--VRTMMPERIKVVILTACMMCLCNADRVVMSVAVVPLADKLGWSSSFLGVVQSSFLWGYIFSSVIGGALVDRYGGKRVLAWGVALWSLATLLTPWAAAHSTLALLCVRAFFGLAEGVAMPSMTTLLSRWFPMDERASAVGISMAGF 235          
BLAST of DN621408 vs. ExPASy Swiss-Prot
Match: PHT42_ORYSJ (Probable anion transporter 2, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;2 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.929e-46
Identity = 89/139 (64.03%), Postives = 106/139 (76.26%), Query Frame = 2
Query:  305 ERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPXTERARAVAIAMGGF 721
            ER KVV+++A  + LCNADRVVMSVA+VP +  +GWS SF GIVQSSFLWGY+ S + GG L D YGGK +MA   ALWSLATFLTPWAA  S + LLA+RA+ GLAEGVA P M+  + +WFP  ERA AV I+MGGF
Sbjct:  121 ERAKVVALVAAVMLLCNADRVVMSVAVVPFAAQYGWSSSFLGIVQSSFLWGYVFSSMVGGALADRYGGKKVMAGAAALWSLATFLTPWAASQSTIMLLAIRALFGLAEGVAFPTMSTFLPKWFPTHERATAVGISMGGF 259          
BLAST of DN621408 vs. ExPASy Swiss-Prot
Match: PHT44_ORYSJ (Probable anion transporter 4, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;4 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.155e-34
Identity = 68/138 (49.28%), Postives = 97/138 (70.29%), Query Frame = 2
Query:  305 ERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPXTERARAVAIAMGG 718
            +R  VV +   +  LCN DRV MS+AI+P+S   GWS +  G++QSSF WGYL++ I GG   D +GGK+++ +GV  WS+AT LTP AA   L  LL MRA +G+ EGVA+PAMNN++++W P +ER+R++A+   G
Sbjct:  180 KRWTVVLLCFFSFLLCNMDRVNMSIAILPMSSEFGWSPATVGLIQSSFFWGYLLTQILGGIWADRFGGKVVLGFGVVWWSIATVLTPLAAKIGLPFLLVMRAFMGIGEGVAMPAMNNILSKWVPVSERSRSLALVYSG 317          
BLAST of DN621408 vs. ExPASy Swiss-Prot
Match: ANTR2_ARATH (Probable anion transporter 2, chloroplastic OS=Arabidopsis thaliana GN=ANTR2 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.177e-33
Identity = 64/134 (47.76%), Postives = 94/134 (70.15%), Query Frame = 2
Query:  317 VVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPXTERARAVAIAMGG 718
            +V +   +  LCN DRV MS+AI+P+S  + WS +  G++QSSF WGYL++ I GG   D +GGK+++ +GV  WS AT +TP AA   L  LL +RA +G+ EGVA+PAMNNM+++W P +ER+R++A+   G
Sbjct:  134 IVLLCFSSFLLCNMDRVNMSIAILPMSQEYNWSSATVGLIQSSFFWGYLLTQILGGIWADKFGGKVVLGFGVVWWSFATIMTPIAARLGLPFLLVVRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLALVYSG 267          
BLAST of DN621408 vs. ExPASy Swiss-Prot
Match: PHT41_ORYSJ (Probable anion transporter 1, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;1 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.844e-33
Identity = 67/138 (48.55%), Postives = 95/138 (68.84%), Query Frame = 2
Query:  305 ERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPXTERARAVAIAMGG 718
            +R  +V +   A  LCN DRV MS+AI+P+S   GW+    G++QSSF WGYL++ IAGG   D  GGK ++ +GV  WS+AT LTP+AA   L  LL  RA +G+ EGVA+PAMNN++++W P +ER+R++A+   G
Sbjct:  118 KRWAIVFLCFSAFLLCNMDRVNMSIAILPMSAEFGWNPQTVGLIQSSFFWGYLLTQIAGGIWADTVGGKTVLGFGVIWWSIATALTPFAAKLGLPFLLVTRAFMGVGEGVAMPAMNNILSKWVPVSERSRSLALVYSG 255          
BLAST of DN621408 vs. ExPASy Swiss-Prot
Match: ANTR1_ARATH (Sodium-dependent phosphate transport protein 1, chloroplastic OS=Arabidopsis thaliana GN=ANTR1 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.844e-33
Identity = 86/229 (37.55%), Postives = 132/229 (57.64%), Query Frame = 2
Query:   98 NLQFSSQFPYKSTNRKLFRNVSSNSGSVGLRTIVGCRVRTGV-----SSNDKSFD-----------------LAPNEDEALAPNFLEFITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPXTERARAVAIAMGG 718
            +L  S++ P K+++ +  RN+  +  S  LR  +  R R+ V      S+DKS                   ++ +    + P + EF   +R  +V +   A  LCN DRV MS+AI+P+S  +GW+ +  G++QSSF WGYL++ IAGG   D  GGK ++ +GV  WS+AT LTP AA   L  LL +RA +G+ EGVA+PAMNN++++W P  ER+R++A+   G
Sbjct:   14 SLYTSNRPPEKTSSSRSLRNLKPSPKS--LRVWIYPRNRSSVFRVLVRSSDKSESSNSYYVEGDKVSGNNDVVSDSPSSIVLPWWEEF--PKRWVIVLLCFSAFLLCNMDRVNMSIAILPMSAEYGWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKRVLGFGVIWWSIATILTPVAAKLGLPYLLVVRAFMGVGEGVAMPAMNNILSKWVPVQERSRSLALVYSG 238          
BLAST of DN621408 vs. ExPASy Swiss-Prot
Match: ANTR6_ARATH (Probable anion transporter 6, chloroplastic OS=Arabidopsis thaliana GN=ANTR6 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.974e-26
Identity = 59/140 (42.14%), Postives = 87/140 (62.14%), Query Frame = 2
Query:  305 ERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPXTERARAVAIAMGGFT 724
            +R K++   +LA  +CN D+V +S+AI+P+S   GWS S +G+VQSSF WGY +S + GG L   +GG+ ++  GV  WS AT L P  A   +  L+  R +VG+ EGV+  A  +++AR  P  ER+RAV    GG +
Sbjct:   97 QRYKLIGATSLAFVICNMDKVNLSIAIIPMSHQFGWSSSVAGLVQSSFFWGYALSQLPGGWLSKIFGGRKVLEIGVFTWSFATALVPLLAG-FMPGLIFSRILVGIGEGVSPSAATDLIARTIPVKERSRAVGFVFGGLS 235          
BLAST of DN621408 vs. ExPASy Swiss-Prot
Match: GUDP_ECOLI (Probable glucarate transporter OS=Escherichia coli (strain K12) GN=gudP PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.159e-16
Identity = 50/148 (33.78%), Postives = 78/148 (52.70%), Query Frame = 2
Query:  275 APNFLEFITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTS----LLALLAMRAVVGLAEGVALPAMNNMVARWFPXTERARAVAI 706
            A + +E  T+ R  +V ML +  +    DR  +S+A   ++   G      G V S+F W Y++  I GG L+D +G K +  W + +WS+ T L  +    S    ++AL  +R +VGLAE  + P  + +VA WFP  ER  AV+I
Sbjct:    7 AASSVEKRTNARYWIVVMLFIVTSFNYGDRATLSIAGSEMAKDIGLDPVGMGYVFSAFSWAYVIGQIPGGWLLDRFGSKRVYFWSIFIWSMFTLLQGFVDIFSGFGIIVALFTLRFLVGLAEAPSFPGNSRIVAAWFPAQERGTAVSI 154          
The following BLAST results are available for this feature:
BLAST of DN621408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
ANTR4_ARATH1.444e-6987.16Probable anion transporter 4, chloroplastic OS=Ara... [more]
PHT43_ORYSJ1.497e-5876.39Probable anion transporter 3, chloroplastic OS=Ory... [more]
ANTR3_ARATH4.087e-4847.35Probable anion transporter 3, chloroplastic OS=Ara... [more]
PHT42_ORYSJ2.929e-4664.03Probable anion transporter 2, chloroplastic OS=Ory... [more]
PHT44_ORYSJ1.155e-3449.28Probable anion transporter 4, chloroplastic OS=Ory... [more]
ANTR2_ARATH2.177e-3347.76Probable anion transporter 2, chloroplastic OS=Ara... [more]
PHT41_ORYSJ2.844e-3348.55Probable anion transporter 1, chloroplastic OS=Ory... [more]
ANTR1_ARATH2.844e-3337.55Sodium-dependent phosphate transport protein 1, ch... [more]
ANTR6_ARATH1.974e-2642.14Probable anion transporter 6, chloroplastic OS=Ara... [more]
GUDP_ECOLI3.159e-1633.78Probable glucarate transporter OS=Escherichia coli... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06K18_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006K18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621408 ID=DN621408; Name=DN621408; organism=Citrus sinensis; type=EST; length=726bp
TTTCGCACTCACACTCAACATGAGCTCTTGTTCACTCTCACCGTATCGAC
CAATTTACGTTCACATCAACAACAAATTCATCGGAATTAAATCGATCAAC
CTTCAATTTTCTTCACAATTTCCTTACAAATCAACGAACCGAAAACTCTT
CAGAAACGTTTCTTCGAACAGTGGCTCAGTTGGATTGCGTACGATTGTCG
GATGTCGAGTGAGGACGGGAGTTTCATCGAACGACAAGTCATTTGATTTG
GCGCCGAACGAGGATGAAGCGCTGGCGCCGAATTTTCTGGAGTTTATTAC
TTCGGAGAGAGTCAAAGTTGTGTCGATGCTTGCTTTGGCGCTGGCGCTTT
GTAATGCTGATAGAGTTGTAATGTCGGTGGCGATTGTACCGTTGTCTCTT
GCTCATGGCTGGAGCCGATCGTTTTCCGGTATAGTTCAGTCATCTTTCCT
CTGGGGATACCTGGTTTCACCGATAGCTGGAGGAACTTTGGTGGATTATT
ATGGTGGGAAGATAATCATGGCATGGGGTGTGGCGTTATGGTCATTAGCT
ACTTTTCTTACTCCTTGGGCTGCTGATACTTCTTTATTGGCTCTGCTGGC
AATGCGAGCTGTTGTTGGACTAGCAGAAGGTGTGGCTCTTCCTGCGATGA
ACAATATGGTTGCAAGATGGTTTCCTCNAACAGAACGAGCTAGGGCTGTT
GCTATTGCAATGGGTGGATTTACATC
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