DN621407

Overview
NameDN621407
Unique NameDN621407
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length796
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6049 contig Csv1_Contig6049:1020..1821. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621407 vs. ExPASy Swiss-Prot
Match: ANTR4_ARATH (Probable anion transporter 4, chloroplastic OS=Arabidopsis thaliana GN=ANTR4 PE=2 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 5.066e-74
Identity = 134/186 (72.04%), Postives = 155/186 (83.33%), Query Frame = -3
Query:  237 MHSWGFFVILSWMPIYFNSVYHVDLRQASWFSAVPWSVMAFTGYLGGLLSDTLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGXXXXXXXXXXXXXXXXXXFSTGERVNFDEAA 794
            MHSWGFFVILSWMPIYFNSVYHV+L+QA+WFSAVPWS+MAFTGY+ G  SD LI+RGTS+TLTRKI+QSIGFI PGIALIGLT AK P++ASAWL+LA+G+KSFSH GFL+NLQEIAP+YSGVLHG+  TAGT AAI+GTVGAGFFVEL+GSFQG                  ++TGERV+FD  A
Sbjct:  348 MHSWGFFVILSWMPIYFNSVYHVNLKQAAWFSAVPWSMMAFTGYIAGFWSDLLIRRGTSITLTRKIMQSIGFIGPGIALIGLTTAKQPLVASAWLSLAVGLKSFSHLGFLINLQEIAPEYSGVLHGMCLTAGTLAAIVGTVGAGFFVELLGSFQGFILLTAILYLLSALFYNIYATGERVDFDTTA 533          
BLAST of DN621407 vs. ExPASy Swiss-Prot
Match: PHT43_ORYSJ (Probable anion transporter 3, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;3 PE=2 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 2.353e-71
Identity = 125/183 (68.31%), Postives = 154/183 (84.15%), Query Frame = -3
Query:  246 MHSWGFFVILSWMPIYFNSVYHVDLRQASWFSAVPWSVMAFTGYLGGLLSDTLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGXXXXXXXXXXXXXXXXXXFSTGERVNFD 794
            MHSWG+FVILSWMP+YF ++YHV+LR+A+WFSA+PW +MA  GY+ G++SD LIQ GTS+TLTRKI+Q+IGF+ PG+AL+GL AAKSPV+ASAWLT+A+G+KSF HSGFLVNLQEIAPQY+GVLHG+SNTAGTFAAILGTVGAGFFV+ +GSF+G                  F+TGERV+FD
Sbjct:  334 MHSWGYFVILSWMPVYFKTIYHVNLREAAWFSALPWVMMAVLGYVAGVVSDRLIQNGTSITLTRKIMQTIGFVGPGVALLGLNAAKSPVIASAWLTIAVGLKSFGHSGFLVNLQEIAPQYAGVLHGMSNTAGTFAAILGTVGAGFFVDRMGSFRGFLILTSLLYFSSTLFWDIFATGERVDFD 516          
BLAST of DN621407 vs. ExPASy Swiss-Prot
Match: ANTR3_ARATH (Probable anion transporter 3, chloroplastic OS=Arabidopsis thaliana GN=ANTR3 PE=2 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 9.298e-52
Identity = 95/179 (53.07%), Postives = 132/179 (73.74%), Query Frame = -3
Query:  255 HSWGFFVILSWMPIYFNSVYHVDLRQASWFSAVPWSVMAFTGYLGGLLSDTLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGXXXXXXXXXXXXXXXXXXFSTGERV 791
            ++WG+FV+LSWMP+YF +V++V+L+QA+WFSA+PW+ MA +GY  G  SD LI+ G SVT  RKI+QSIGF+ PG++L+ L  AKSP  A+ ++T+A+ + SFS +GFL+N+Q+IAPQY+G LHGISN AGT AAI+ T+G G+FV+ +GSFQ                   F+TGERV
Sbjct:  333 NNWGYFVLLSWMPVYFQTVFNVNLKQAAWFSALPWATMAISGYYAGAASDFLIRTGHSVTSVRKIMQSIGFMGPGLSLLCLNFAKSPSCAAVFMTIALSLSSFSQAGFLLNMQDIAPQYAGFLHGISNCAGTLAAIVSTIGTGYFVQWLGSFQAFLTVTAFLYFATTVFWLLFATGERV 511          
BLAST of DN621407 vs. ExPASy Swiss-Prot
Match: PHT42_ORYSJ (Probable anion transporter 2, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;2 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.143e-48
Identity = 83/154 (53.90%), Postives = 125/154 (81.17%), Query Frame = -3
Query:  333 MHSWGFFVILSWMPIYFNSVYHVDLRQASWFSAVPWSVMAFTGYLGGLLSDTLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQ 794
            +++WG+FV+LSWMP+YF +VY+V+L+QA+WFSA+PW+VMA +GY+ G  +D LI+ G SV L RKI+QSIGFI PG++L+ L  A++P +A+  +T+A+ + SFS +G+  N+Q+IAP+Y+G LHG++N  GT AAI+ T+G G+FV+ +GSFQ
Sbjct:  354 VNNWGYFVLLSWMPVYFKTVYNVNLKQAAWFSAIPWAVMALSGYVAGASADFLIKSGFSVALVRKIMQSIGFIGPGVSLLCLRFAQTPSVAAVLMTIALSLSSFSQAGYFCNVQDIAPKYAGSLHGLTNGIGTVAAIVSTIGTGYFVQWLGSFQ 507          
BLAST of DN621407 vs. ExPASy Swiss-Prot
Match: PHT41_ORYSJ (Probable anion transporter 1, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;1 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.322e-33
Identity = 72/179 (40.22%), Postives = 102/179 (56.98%), Query Frame = -3
Query:  255 HSWGFFVILSWMPIYFNSVYHVDLRQASWFSAVPWSVMAFTGYLGGLLSDTLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGXXXXXXXXXXXXXXXXXXFSTGERV 791
            H+WG F++L+WMP Y+N V   +L ++  F  +PW  MA +   GG ++DTL+ RG SVT  RKI+QSIGF+ P   L  L+   SP MA   +  + G  +FS SG   N Q+I P+Y+GVL G+SNTAG  A + GT   G+ ++  GS+                    FSTGE++
Sbjct:  350 HNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVSANFGGWIADTLVSRGLSVTTVRKIMQSIGFLGPAFFLTQLSHIDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ-HGSWDDVFKVSVVLYLVGTLVWNLFSTGEKI 527          
BLAST of DN621407 vs. ExPASy Swiss-Prot
Match: PHT44_ORYSJ (Probable anion transporter 4, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;4 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.262e-32
Identity = 70/179 (39.11%), Postives = 103/179 (57.54%), Query Frame = -3
Query:  255 HSWGFFVILSWMPIYFNSVYHVDLRQASWFSAVPWSVMAFTGYLGGLLSDTLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGXXXXXXXXXXXXXXXXXXFSTGERV 791
            H+WG F++L+WMP Y+N V   +L ++     +PW  MA    +GG ++DTL+ RG S+T  RKI+QSIGF+ P + L  L+  ++P MA   +  + G  +FS SG   N Q+I P+Y+GVL G+SNTAG  A + GT   G+ ++  GS+                    FSTGE+V
Sbjct:  412 HNWGTFILLTWMPTYYNQVLKFNLTESGLLCVLPWLTMAIFANIGGWIADTLVGRGVSITNVRKIMQSIGFLGPALFLTLLSKVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ-KGSWDSVFQVAVVLYIVGTVVWNVFSTGEKV 589          
BLAST of DN621407 vs. ExPASy Swiss-Prot
Match: ANTR2_ARATH (Probable anion transporter 2, chloroplastic OS=Arabidopsis thaliana GN=ANTR2 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.813e-32
Identity = 63/147 (42.86%), Postives = 92/147 (62.59%), Query Frame = -3
Query:  351 HSWGFFVILSWMPIYFNSVYHVDLRQASWFSAVPWSVMAFTGYLGGLLSDTLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVE 791
            H+WG F++L+WMP Y+N V   +L ++     +PW  MA    +GG ++DTL+ RG S+T  RKI+QSIGF+ P   L  L+  K+P MA   +  + G  +FS SG   N Q+I P+Y+GVL G+SNTAG  A + GT   G+ ++
Sbjct:  362 HNWGTFILLTWMPTYYNQVLKFNLTESGLLCVLPWLTMAVFANIGGWIADTLVSRGLSITNVRKIMQSIGFLGPAFFLSQLSHVKTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ 508          
BLAST of DN621407 vs. ExPASy Swiss-Prot
Match: ANTR1_ARATH (Sodium-dependent phosphate transport protein 1, chloroplastic OS=Arabidopsis thaliana GN=ANTR1 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.813e-32
Identity = 73/179 (40.78%), Postives = 101/179 (56.42%), Query Frame = -3
Query:  255 HSWGFFVILSWMPIYFNSVYHVDLRQASWFSAVPWSVMAFTGYLGGLLSDTLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGXXXXXXXXXXXXXXXXXXFSTGERV 791
            H+WG F++L+WMP Y++ V   +L ++   S  PW  MA +   GG ++DTL+ RG SVT  RKI+Q+IGF+ P   L  L    SP MA   +  + G  +FS SG   N Q+IAP+YSGVL G+SNTAG  A +LGT   G  ++  GS+                    FSTGE++
Sbjct:  333 HNWGTFILLTWMPTYYHQVLKFNLMESGLLSVFPWMTMAISANAGGWIADTLVSRGFSVTNVRKIMQTIGFLGPAFFLTQLKHIDSPTMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVLGTAATGHILQ-HGSWDDVFTISVGLYLVGTVIWNLFSTGEKI 510          
BLAST of DN621407 vs. ExPASy Swiss-Prot
Match: S17A9_MOUSE (Solute carrier family 17 member 9 OS=Mus musculus GN=Slc17a9 PE=1 SV=3)

HSP 1 Score: 101.293 bits (251), Expect = 6.499e-21
Identity = 51/149 (34.23%), Postives = 82/149 (55.03%), Query Frame = -3
Query:  336 FFVILSWMPIYFNSVYHVDLRQASW-FSAVPWSVMAFTGYLGGLLSDTLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSF 779
            FF++LSW+P +F   +        W F+ VPW +        G +SD LI +G  V   RK +Q +G     I  + L    S + A  + + +IG ++F+HSG  VN+Q++AP  +G L G++NTAG  A ++G   +G+ +E  GS+
Sbjct:  266 FFILLSWLPTFFKETFP---NSKGWVFNVVPWMLAIPASLFSGFISDRLISQGYRVITVRKFMQVMGLGLSSIFALCLGHTTSFLKAMIFASASIGFQTFNHSGISVNIQDLAPSCAGFLFGVANTAGALAGVVGVCLSGYLIETTGSW 411          
BLAST of DN621407 vs. ExPASy Swiss-Prot
Match: PHT46_ORYSJ (Probable anion transporter 6 OS=Oryza sativa subsp. japonica GN=PHT4;6 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.891e-20
Identity = 51/146 (34.93%), Postives = 87/146 (59.59%), Query Frame = -3
Query:  351 WGFFVILSWMPIYFNSVYHVDLRQASWFSAVPWSVMAFTGYLGGLLSDTLIQRGT-SVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVE 785
            +  +V+++W+P YF     + L+   +   +P+  M     +GG+L+D LI R   SVT TRK+L ++GF+   IAL+ L   ++P  A    ++++G  +   +GF VN  ++AP+++G++ GISNTAGT A I+G    G  +E
Sbjct:  239 YALYVLMNWLPTYFKLGLQLSLQDMGFSKMLPYLNMFLFSNIGGVLADHLITRKILSVTKTRKLLNTVGFVVSAIALMALPLFRTPSGAIFCSSVSLGFLALGRAGFAVNHMDVAPKFAGIVMGISNTAGTLAGIVGVGLTGRILE 384          
The following BLAST results are available for this feature:
BLAST of DN621407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
ANTR4_ARATH5.066e-7472.04Probable anion transporter 4, chloroplastic OS=Ara... [more]
PHT43_ORYSJ2.353e-7168.31Probable anion transporter 3, chloroplastic OS=Ory... [more]
ANTR3_ARATH9.298e-5253.07Probable anion transporter 3, chloroplastic OS=Ara... [more]
PHT42_ORYSJ2.143e-4853.90Probable anion transporter 2, chloroplastic OS=Ory... [more]
PHT41_ORYSJ3.322e-3340.22Probable anion transporter 1, chloroplastic OS=Ory... [more]
PHT44_ORYSJ1.262e-3239.11Probable anion transporter 4, chloroplastic OS=Ory... [more]
ANTR2_ARATH2.813e-3242.86Probable anion transporter 2, chloroplastic OS=Ara... [more]
ANTR1_ARATH2.813e-3240.78Sodium-dependent phosphate transport protein 1, ch... [more]
S17A9_MOUSE6.499e-2134.23Solute carrier family 17 member 9 OS=Mus musculus ... [more]
PHT46_ORYSJ1.891e-2034.93Probable anion transporter 6 OS=Oryza sativa subsp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06K18_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006K18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621407 ID=DN621407; Name=DN621407; organism=Citrus sinensis; type=EST; length=796bp
CCCCCCCCTTTTTTTTTAAAAATGAAAACTAGTGCCTGTGGATAAATGCA
CTTTTTATCTTACCTCATACAAGATGCTACAACTTTGGTACAATCAGGGA
TGCAATTATGCAAATATCATACCCTGTACAATTCTTTTATTTTGCAGGGA
AAAAGAGAAAAGAAAAAAAAAAAGCCCTTTTCTTTTAATACAGGATTCAA
CCGCTATTTGGCAGGAGACTTGGACCTCGTTCATAAAGCAGCTTCATCAA
AATTCACTCTCTCTCCTGTAGAAAAGATGATGTAGAAAAGGGCAGAGAGG
AAATATAAGAGCGATGTGAGCAACAGAAACCCTTGGAAAGAGCCCACAAG
CTCCACAAAAAAACCAGCTCCAACTGTTCCTAAAATGGCAGCAAATGTTC
CGGCAGTATTTGAGATTCCGTGTAAAACACCAGAATATTGGGGAGCAATC
TCCTGAAGATTCACAAGAAAACCCGAGTGACTGAAAGATTTCATTCCAAT
GGCTAAAGTCAGCCATGCAGACGCCATTACTGGACTTTTTGCTGCAGTTA
ACCCAATAAGTGCAATTCCCGGTGCGATAAAACCAATTGACTGCAAGATC
TTGCGAGTCAAAGTCACACTTGTGCCCCTCTGTATCAACGTGTCTGACAA
TAAACCACCCAAGTATCCTGTAAATGCCATAACACTCCATGGAACAGCAC
TAAACCATGATGCTTGTCTCAGGTCAACATGATATACAGAGTTGAAGTAG
ATTGGCATCCACGAAAGAATAACAAAAAAACCCCAACTATGCATGG
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