DN621393

Overview
NameDN621393
Unique NameDN621393
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621393 vs. ExPASy Swiss-Prot
Match: E1311_ARATH (Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis thaliana GN=At1g32860 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.467e-26
Identity = 56/94 (59.57%), Postives = 70/94 (74.47%), Query Frame = -2
Query:  424 AGFKKMEVIVTETGWASRGDSNEAAATVDNARTYNYNLRKRL--AKKKGTPLRPKNVVKAYVFAIFNENQKPGPTSERNFGLFKPDGSIAYDIG 699
            AGFK + V ++ETGW S+GD +E  AT +NA+ YN NL K +   KK  TPL+P N +  YVFA+FNEN KPGPTSERN+GLFKPDG+ AY +G
Sbjct:  255 AGFKSLRVEISETGWPSKGDDDEVGATPENAKRYNGNLIKMMMSGKKTKTPLKPNNDLSIYVFALFNENLKPGPTSERNYGLFKPDGTQAYSLG 348          
BLAST of DN621393 vs. ExPASy Swiss-Prot
Match: E137_ARATH (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 3.221e-26
Identity = 54/91 (59.34%), Postives = 68/91 (74.73%), Query Frame = -2
Query:  424 GFKKMEVIVTETGWASRGDSNEAAATVDNARTYNYNLRKRLAKKKGTPLRPKNVVKAYVFAIFNENQKPGPTSERNFGLFKPDGSIAYDIG 696
            GF+K+E++V ETGWASRGD+NE  A+VDNA+ YN NL   L    GTPL P   V  Y+FA+++EN KPGP+SER FGLFK D S+ YD+G
Sbjct:  254 GFEKVEIVVAETGWASRGDANEVGASVDNAKAYNGNLIAHLRSMVGTPLMPGKPVDTYIFALYDENLKPGPSSERAFGLFKTDLSMVYDVG 344          
BLAST of DN621393 vs. ExPASy Swiss-Prot
Match: E1310_ARATH (Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis thaliana GN=At5g42100 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.309e-24
Identity = 52/91 (57.14%), Postives = 67/91 (73.63%), Query Frame = -2
Query:  424 FKKMEVIVTETGWASRGDSNEAAATVDNARTYNYNLRKRL-AKKKGTPLRPKNVVKAYVFAIFNENQKPGPTSERNFGLFKPDGSIAYDIG 693
            +KK+ ++V+ETGW S GD  E  AT DNAR YN NL K + +KK  TP+RP+  +  +VFA+FNEN KPGPTSERN+GLF PDG+  Y +G
Sbjct:  257 YKKVPIVVSETGWPSNGDPQEVGATCDNARKYNGNLIKMMMSKKMRTPIRPECDLTIFVFALFNENMKPGPTSERNYGLFNPDGTPVYSLG 347          
BLAST of DN621393 vs. ExPASy Swiss-Prot
Match: E1314_ARATH (Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis thaliana GN=At2g27500/F10A12.18 PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.267e-22
Identity = 48/91 (52.75%), Postives = 63/91 (69.23%), Query Frame = -2
Query:  424 GFKKMEVIVTETGWASRGDSNEAAATVDNARTYNYNLRKRLAKKKGTPLRPKNVVKAYVFAIFNENQKPGPTSERNFGLFKPDGSIAYDIG 696
            G   +EV ++ETGW S+GD NE  A+ +NA  YN NL K + ++KGTP +    +  YVFA+FNEN KPGP SERN+GLF PDG   Y++G
Sbjct:  257 GHTDIEVRISETGWPSKGDENEIGASPENAALYNGNLLKLIQQRKGTPAKQSVPIDVYVFALFNENLKPGPVSERNYGLFYPDGKPVYNVG 347          
BLAST of DN621393 vs. ExPASy Swiss-Prot
Match: E134_ARATH (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19
Identity = 42/89 (47.19%), Postives = 61/89 (68.54%), Query Frame = -2
Query:  427 FKKMEVIVTETGWASRGDSNEAAATVDNARTYNYNLRKRLAKKKGTPLRPKNVVKAYVFAIFNENQKPGPTSERNFGLFKPDGSIAYDI 693
            F K+ V+VTETGW S G S+EAAATV NA T+N NL KR+    G P +P   +  Y++ ++NE+++ GP SERN+G+  P+G+  Y +
Sbjct:  257 FSKIPVVVTETGWPSSGGSDEAAATVANAETFNTNLIKRVLNNSGPPSQPDIPINTYIYELYNEDKRSGPVSERNWGILFPNGTSVYPL 345          
BLAST of DN621393 vs. ExPASy Swiss-Prot
Match: E1313_ARATH (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.472e-18
Identity = 41/90 (45.56%), Postives = 62/90 (68.89%), Query Frame = -2
Query:  427 FKKMEVIVTETGWASRGDSNE-AAATVDNARTYNYNLRKRLAKKKGTPLRPKNVVKAYVFAIFNENQKPGPTSERNFGLFKPDGSIAYDI 693
            F+ ++++VTETGW ++G   E AAA+ DNA TYN N+ + +   +GTP +P   +  Y+F++FNEN+K G  SERN+GLF PD +  Y +
Sbjct:  255 FRTIKIMVTETGWPTKGSPKEKAAASSDNAETYNSNIIRHVVTNQGTPAKPGEAMNVYIFSLFNENRKAGLDSERNWGLFYPDQTSVYQL 344          
BLAST of DN621393 vs. ExPASy Swiss-Prot
Match: E133_ARATH (Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 5.508e-18
Identity = 39/89 (43.82%), Postives = 59/89 (66.29%), Query Frame = -2
Query:  427 FKKMEVIVTETGWASRGDSNEAAATVDNARTYNYNLRKRLAKKKGTPLRPKNVVKAYVFAIFNENQKPGPTSERNFGLFKPDGSIAYDI 693
            F  + ++VTE+GW S+G  +E  ATV+NA TYN NL + +  K GTP  P   V  Y++ ++NE+ +PGP SE+N+GLF  +G+  Y +
Sbjct:  254 FTNIPIVVTESGWPSKGGPSEHDATVENANTYNSNLIQHVINKTGTPKHPGTAVTTYIYELYNEDTRPGPVSEKNWGLFYTNGTPVYTL 342          
BLAST of DN621393 vs. ExPASy Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.193e-18
Identity = 41/87 (47.13%), Postives = 59/87 (67.82%), Query Frame = -2
Query:  433 FKKMEVIVTETGWASRGDSNEAAATVDNARTYNYNLRKRLAKKKGTPLRPKNVVKAYVFAIFNENQKPGPTSERNFGLFKPDGSIAY 693
            FK ++V+VTE+GW S+G   E AAT +NA  YN NL + +    GTP +P   +  Y+F++FNEN+KPG  SERN+G+F  +G+  Y
Sbjct:  255 FKTVKVMVTESGWPSKGSPKETAATPENALAYNTNLIRHVIGDPGTPAKPGEEIDVYLFSLFNENRKPGIESERNWGMFYANGTNVY 341          
BLAST of DN621393 vs. ExPASy Swiss-Prot
Match: E132_ARATH (Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana GN=At1g66250 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 6.089e-17
Identity = 41/87 (47.13%), Postives = 58/87 (66.67%), Query Frame = -2
Query:  433 FKKMEVIVTETGWASRGDSNEAAATVDNARTYNYNLRKRLAKKKGTPLRPKNVVKAYVFAIFNENQKPGPTSERNFGLFKPDGSIAY 693
            F  + V+VTE+GW S+G++NE  AT+DNA TYN NL + +  K GTP RP   V  Y++ ++NE+ K G  SE+N+GLF  +G   Y
Sbjct:  263 FTNIPVLVTESGWPSKGETNEPDATLDNANTYNSNLIRHVLNKTGTPKRPGIAVSTYIYELYNEDTKAG-LSEKNWGLFNANGEPVY 348          
BLAST of DN621393 vs. ExPASy Swiss-Prot
Match: EA6_ARATH (Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana GN=A6 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.772e-16
Identity = 40/92 (43.48%), Postives = 60/92 (65.22%), Query Frame = -2
Query:  427 GFKKMEVIVTETGWASRGDSNEAAATVDNARTYNYNLRKRLAKKK--GTPLRPKNVVKAYVFAIFNENQKPGPTSERNFGLFKPDGSIAYDI 696
            G+  M + ++ETGW + GD +E  A + NA TYN NL K+++     GTP RP   +  +VF++FNENQK G  ++R++G+  PDGS  YD+
Sbjct:  270 GYPHMRLAISETGWPNFGDIDETGANILNAATYNRNLIKKMSASPPIGTPSRPGLPIPTFVFSLFNENQKSGSGTQRHWGILHPDGSPIYDV 361          
The following BLAST results are available for this feature:
BLAST of DN621393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
E1311_ARATH2.467e-2659.57Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis... [more]
E137_ARATH3.221e-2659.34Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis ... [more]
E1310_ARATH2.309e-2457.14Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis... [more]
E1314_ARATH1.267e-2252.75Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis... [more]
E134_ARATH3.814e-1947.19Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis ... [more]
E1313_ARATH2.472e-1845.56Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... [more]
E133_ARATH5.508e-1843.82Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis ... [more]
E1312_ARATH7.193e-1847.13Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... [more]
E132_ARATH6.089e-1747.13Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis ... [more]
EA6_ARATH1.772e-1643.48Probable glucan endo-1,3-beta-glucosidase A6 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06K10_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006K10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621393 ID=DN621393; Name=DN621393; organism=Citrus sinensis; type=EST; length=703bp
CCCCCNGGGCTGCAGGTTTTTTTTTAAATCTGTAGATGGAATCTCGAATT
TTCCTCCTTGGTTCTTTTGACATGAACTCACTAGGAGAACACGTTTAACC
AGGCAAAAATCAATTTACATTTGCTGATACAGATAAAATAATCAGCAATC
CTAGCTTATGTTTTTAAATGAAAATACAAGAATTTAGGTATATAGTTTCA
ACTATTGAGCATGTTGTGAAATGCACCAAACTCAGAACCCTTTGACTTGC
GTGTGCTGGTTTGGCAATTAAAATATATGACTGCCCTGAGACATGCTCAA
TCACTAGCTTAAGAACAACCATTGCCACAGCAAGATTATTAAAATCAAGG
AACAATCTCGAGCTCGAATATCCTTAAAAGACAGATGTGATGAACCAGCA
GATGAAGACTTCAGTCCATGAAATCCAATGTCATATGCAATGCTCCCATC
AGGCTTAAACAGTCCAAAATTCCTCTCAGAAGTCGGTCCAGGTTTCTGAT
TCTCATTAAAAATAGCAAAAACATAAGCCTTCACCACATTTTTCGGCCGA
AGAGGAGTTCCTTTCTTCTTAGCAAGCCTTTTCCGCAGATTATAATTGTA
TGTCCTTGCATTGTCAACCGTTGCAGCAGCTTCATTGCTATCTCCACGGG
AGGCCCATCCTGTCTCTGTGACTATGACTTCCATCTTTTTAAATCCAGCA
TCC
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