DN621391
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN621391 vs. ExPASy Swiss-Prot
Match: CD48D_ARATH (Cell division control protein 48 homolog D OS=Arabidopsis thaliana GN=CDC48D PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.504e-27 Identity = 66/83 (79.52%), Postives = 68/83 (81.93%), Query Frame = 3 Query: 3 EIKAVHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDA------APPGAD---GGSDPFASSAGGAEDDDLYS 224 EIKA HFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDA A PGA GG DPFA+S G A+DDDLYS Sbjct: 733 EIKAGHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDAPTGTTGAFPGAAATVGGVDPFATSGGAADDDDLYS 815
BLAST of DN621391 vs. ExPASy Swiss-Prot
Match: CDC48_SOYBN (Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 4.375e-27 Identity = 60/74 (81.08%), Postives = 66/74 (89.19%), Query Frame = 3 Query: 3 EIKAVHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDAAPPGADGGSDPFASSAGGAEDDDLYS 224 EIKA HFEESMK+ARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFP++ GSDPFA+SAGGA++DDLYS Sbjct: 735 EIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPESG-DRTTTGSDPFAASAGGADEDDLYS 807
BLAST of DN621391 vs. ExPASy Swiss-Prot
Match: CD48E_ARATH (Cell division control protein 48 homolog E OS=Arabidopsis thaliana GN=CDC48E PE=2 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 2.401e-25 Identity = 59/77 (76.62%), Postives = 63/77 (81.82%), Query Frame = 3 Query: 3 EIKAVHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDAAPPGADGG---SDPFASSAGGAEDDDLYS 224 EI+A HFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF A G G +DPFA+SA A+DDDLYS Sbjct: 734 EIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFDSTAGVGRTTGVAAADPFATSAAAADDDDLYS 810
BLAST of DN621391 vs. ExPASy Swiss-Prot
Match: CD48A_ARATH (Cell division control protein 48 homolog A OS=Arabidopsis thaliana GN=CDC48A PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.095e-25 Identity = 60/76 (78.95%), Postives = 66/76 (86.84%), Query Frame = 3 Query: 3 EIKAVHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDAAPPGADGG-SDPFASSAGGA-EDDDLYS 224 EIKA HFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF ++A GA G +DPFA+SA A +DDDLY+ Sbjct: 734 EIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFENSAGSGATTGVADPFATSAAAAGDDDDLYN 809
BLAST of DN621391 vs. ExPASy Swiss-Prot
Match: CDC48_CAPAN (Cell division cycle protein 48 homolog OS=Capsicum annuum GN=CAFP PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.348e-25 Identity = 57/74 (77.03%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 3 EIKAVHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDAAPPGADGGSDPFASSAGGAEDDDLYS 224 EIK HFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFG+EFRF D + GA +DPFA+S A+DDDLYS Sbjct: 733 EIKPAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFADTS-GGATAAADPFATSNAAADDDDLYS 805
BLAST of DN621391 vs. ExPASy Swiss-Prot
Match: TERA2_CAEEL (Transitional endoplasmic reticulum ATPase homolog 2 OS=Caenorhabditis elegans GN=cdc-48.2 PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 3.713e-18 Identity = 47/79 (59.49%), Postives = 56/79 (70.89%), Query Frame = 3 Query: 3 EIKAVHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDAAPP-----GADGGSDPFASSAGGAEDDDLYS 224 EI HFEE+MK+ARRSV+D DIRKY+ FAQTLQQSRGFG+ F+FP AP G +GGS GG +DDDLY+ Sbjct: 739 EITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNNFKFPGEAPSAGQPVGGNGGS-------GGNDDDDLYN 810
BLAST of DN621391 vs. ExPASy Swiss-Prot
Match: TERA_DROME (Transitional endoplasmic reticulum ATPase TER94 OS=Drosophila melanogaster GN=TER94 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.849e-18 Identity = 45/74 (60.81%), Postives = 53/74 (71.62%), Query Frame = 3 Query: 3 EIKAVHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDAAPPGADGGSDPFASSAGGAEDDDLYS 224 EI + HFEE+MK+ARRSVSD DIRKY+ FAQTLQQSRGFG FRFP + G++ +S G DDDLYS Sbjct: 728 EITSAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGQNFRFPGQTGNTSGSGNNLPVNSPGDNGDDDLYS 801
BLAST of DN621391 vs. ExPASy Swiss-Prot
Match: TERA1_CAEEL (Transitional endoplasmic reticulum ATPase homolog 1 OS=Caenorhabditis elegans GN=cdc-48.1 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 7.001e-17 Identity = 43/74 (58.11%), Postives = 53/74 (71.62%), Query Frame = 3 Query: 3 EIKAVHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDAAPPGADGGSDPFASSAGGAEDDDLYS 224 EI HFEE+MK+ARRSV+D DIRKY+ FAQTLQQSRGFG+ F+F PG GSD ++ +DDDLY+ Sbjct: 741 EITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNNFKF-----PGEQRGSDAPSAPVPAQDDDDLYN 809
BLAST of DN621391 vs. ExPASy Swiss-Prot
Match: TERA_XENTR (Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis GN=vcp PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.194e-16 Identity = 47/80 (58.75%), Postives = 56/80 (70.00%), Query Frame = 3 Query: 3 EIKAVHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDAAPPGADGGSDPFASSAGGA-------EDDDLY 221 EI+ HFEE+M++ARRSVSD DIRKY+ FAQTLQQSRGFGS FRF P G GG+ P + GG+ E+DDLY Sbjct: 730 EIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRF----PAGGQGGAGPSQGAGGGSGGSHFNEEEDDLY 804
BLAST of DN621391 vs. ExPASy Swiss-Prot
Match: TERA_XENLA (Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp PE=1 SV=3) HSP 1 Score: 85.1149 bits (209), Expect = 1.194e-16 Identity = 47/76 (61.84%), Postives = 52/76 (68.42%), Query Frame = 3 Query: 3 EIKAVHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDAAPPGADGGSDPFASSAGG---AEDDDLY 221 EI+ HFEE+M++ARRSVSD DIRKY+ FAQTLQQSRGFGS FRFP GA S GG EDDDLY Sbjct: 730 EIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFPAGGQSGAGPSPGAGGGSGGGHFTEEDDDLY 804 The following BLAST results are available for this feature:
BLAST of DN621391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN621391 ID=DN621391; Name=DN621391; organism=Citrus sinensis; type=EST; length=413bpback to top |