DN621359

Overview
NameDN621359
Unique NameDN621359
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length420
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12718 contig Csv1_Contig12718:1996..2415. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DN621359 vs. ExPASy Swiss-Prot
Match: DRP1E_ARATH (Dynamin-related protein 1E OS=Arabidopsis thaliana GN=DRP1E PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.197e-14
Identity = 34/43 (79.07%), Postives = 40/43 (93.02%), Query Frame = -1 
Query:  280 QAKQLGQLLDEDPAMMERRLQCAKRLELYKAARDEIDSVSWAR 408
            + KQLGQLLDEDPA+M+RRL+CAKRLELYK ARDEID+V+W R
Sbjct:  582 EGKQLGQLLDEDPALMDRRLECAKRLELYKKARDEIDAVAWVR 624
[Close]
BLAST of DN621359 vs. ExPASy Swiss-Prot
Match: DRP1D_ARATH (Dynamin-related protein 1D OS=Arabidopsis thaliana GN=DRP1D PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 4.640e-13
Identity = 33/43 (76.74%), Postives = 38/43 (88.37%), Query Frame = -1 
Query:  280 QAKQLGQLLDEDPAMMERRLQCAKRLELYKAARDEIDSVSWAR 408
            Q K+LGQLLDE+PA+MERR+QCAKRLELYK ARDEID+  W R
Sbjct:  570 QGKRLGQLLDENPALMERRMQCAKRLELYKKARDEIDAAVWVR 612
The following BLAST results are available for this feature:
BLAST of DN621359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
DRP1E_ARATH4.197e-1479.07Dynamin-related protein 1E OS=Arabidopsis thaliana... [more]
DRP1D_ARATH4.640e-1376.74Dynamin-related protein 1D OS=Arabidopsis thaliana... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_06J17_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006J17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621359 ID=DN621359; Name=DN621359; organism=Citrus sinensis; type=EST; length=420bp
CCCCCCTTTTTTTTTTTTTGGTATGGATAACAACACTATTAAAAAATAAG
ATTACTATTACTGTATTACATGGACGACGCTACAAGAATCTACGGTTCCA
ACTTCCCAGCCCAATCAATCTACATACAATACGGTAATGAATAGCACATC
TATGCTAGAAAAAAAGAAAACAAAGAATTTCAAGCGTCAAACAGTTGACT
AAACAAAAAGACTGCAAGATATGAATCATTCATCTGCATGACTATAATAC
AGCGTAGTAGCAAATGCGAATTAATCTCATCGAGCCCATGAAACTGAATC
TATCTCATCCCTCGCTGCCTTGTACAATTCAAGCCTCTTAGCACACTGTA
GTCTCCTTTCCATCATGGCTGGGTCTTCATCCAACAATTGTCCAAGCTGC
TTAGCCTGCAACAGATTGGA
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