DN621343

Overview
NameDN621343
Unique NameDN621343
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length671
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN621343_ssr243 microsatellite DN621343_ssr243:243..254. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig12427 contig Csv1_Contig12427:15..685. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DN621343 vs. ExPASy Swiss-Prot
Match: ANTA_GENTR (Anthocyanin 5-aromatic acyltransferase OS=Gentiana triflora PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15
Identity = 49/169 (28.99%), Postives = 84/169 (49.70%), Query Frame = 1 
Query:  115 TLPLTYFDTLWLKFPPSERLFFYQITDLTIDLFNSVIIPKXXXXXXXXXXXXXXXAGHIMWPADSAK-PAIYYFPDQNDGVSFTVAESDADFSHLTGNN--GNREAVEFHHLTPQL--SISDDKA-EVVAIQITLFPKQGFCISVLTHHAVIDGISKTMFERSWAYFCK 603
            +LP+T+FD  WL     + L FY          ++VI P                +G+++ P  S + P   Y  D+ D ++  VAESD DF +L G+    + +     ++ P++  ++ D K   +VA+Q+T+FP +G  +++  HH++ D  S  MF  +WAY  K
Sbjct:   27 SLPVTFFDIPWLHLNKMQSLLFYDFPYPRTHFLDTVI-PNLKASLSLTLKHYVPLSGNLLMPIKSGEMPKFQYSRDEGDSITLIVAESDQDFDYLKGHQLVDSNDLHGLFYVMPRVIRTMQDYKVIPLVAVQVTVFPNRGIAVALTAHHSIADAKSFVMFINAWAYINK 194
The following BLAST results are available for this feature:
BLAST of DN621343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ANTA_GENTR3.967e-1528.99Anthocyanin 5-aromatic acyltransferase OS=Gentiana... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_06J08_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006J08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621343 ID=DN621343; Name=DN621343; organism=Citrus sinensis; type=EST; length=671bp
TTTCTTAATATTTTTACTCTCTCCCTCACGATCGTCATGGCAGAAAAACA
TAAAGTGAAAATACATTCAGTTAGCAAAATCAGCCCGCCGTCGTCCGACT
CAGTCACCGCCTCCACTCTTCCACTCACCTACTTCGATACTCTGTGGCTA
AAATTTCCACCTTCAGAACGCCTCTTTTTCTATCAAATCACTGACCTAAC
TATCGATTTATTCAACTCAGTGATCATCCCGAAGCTCGCTGACTCTCTCT
CTCTCACTCTCCTTCATTATCTCCCCCTCGCCGGTCACATAATGTGGCCT
GCGGACTCCGCGAAGCCAGCCATTTACTACTTCCCTGACCAAAACGACGG
CGTCTCATTCACCGTTGCTGAATCCGACGCTGACTTCAGCCACCTCACTG
GCAATAACGGAAACCGCGAAGCCGTTGAATTTCATCATCTGACGCCCCAG
TTGTCCATATCCGACGATAAAGCTGAGGTGGTTGCTATACAAATAACTCT
GTTTCCGAAACAAGGGTTTTGCATCTCCGTCTTGACTCACCACGCTGTCA
TCGACGGGATAAGCAAAACAATGTTTGAGAGATCTTGGGCTTATTTCTGC
AAACAACTAATTCAAATGCAACAACAAAACCTTAATAATTCTTCGATATT
ATTACCCACCGAGCTAATCCC
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