DN621336

Overview
NameDN621336
Unique NameDN621336
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN621336_ssr79 microsatellite DN621336_ssr79:79..90. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1235 contig Csv1_Contig1235:21..731. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621336 vs. ExPASy Swiss-Prot
Match: C89A2_ARATH (Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CYP89A2 PE=2 SV=2)

HSP 1 Score: 266.159 bits (679), Expect = 1.270e-70
Identity = 132/199 (66.33%), Postives = 159/199 (79.90%), Query Frame = -2
Query:  117 GTDTTSTALQWIMANLVKHPHVQETVYTEIRXXXXXXXXXXXXE-LQKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFVLDDKYVIPKDGSVNFMVAEMGWDPKVWEDPMGFKPERFLNDHDQDFDITGSREIKMMPFGAGRRICPGFGLAMLHLEYFVANLVWNFEWTAVDGDEVDLTEKQEFTVVMKNPLQALLSPR 710
            GTDTT+TALQWIMANLVK+P +QE ++ EI+            E ++KMPYLKAV+LEGLRRHPPGHF+LPH+VTED VL   Y +PK+G++NFMVAE+G DP  WE+PM FKPERF+ + ++  D+TGSR IKMMPFGAGRRICPG GLAMLHLEY+VAN+V  F+W  V G EVDLTEK EFTVVMK+PL+AL  PR
Sbjct:  307 GTDTTATALQWIMANLVKYPEIQERLHEEIKSVVGEEAKEVEEEDVEKMPYLKAVVLEGLRRHPPGHFLLPHSVTEDTVLGG-YKVPKNGTINFMVAEIGRDPVEWEEPMAFKPERFMGE-EEAVDLTGSRGIKMMPFGAGRRICPGIGLAMLHLEYYVANMVREFQWKEVQGHEVDLTEKLEFTVVMKHPLKALAVPR 503          
BLAST of DN621336 vs. ExPASy Swiss-Prot
Match: C77A1_SOLME (Cytochrome P450 77A1 (Fragment) OS=Solanum melongena GN=CYP77A1 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.279e-46
Identity = 98/199 (49.25%), Postives = 130/199 (65.33%), Query Frame = -2
Query:  117 GTDTTSTALQWIMANLVKHPHVQETVYTEIRXXXXXXXXXXXXELQKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFVLDDKYVIPKDGSVNFMVAEMGWDPKVWEDPMGFKPERFLNDHDQDFDITGSREIKMMPFGAGRRICPGFGLAMLHLEYFVANLVWNFEWTAVDG-DEVDLTEKQEFTVVMKNPLQALLSPR 710
            GTDTT+TAL+W +  L+++P +Q  +Y EI+             ++KMPYL AV+ E LR+HPP +F L H+VTE   L   Y IP D +V F V  +  DP VW DP  F P+RFL+  + D DITG +E+KMMPFG GRRICPG G+A +H+   +A +V  FEW A  G ++VD +EK EFTVVMKNPL+A +  R
Sbjct:  303 GTDTTATALEWGIGRLMENPTIQNQLYQEIKTIVGDKKVDEND-IEKMPYLNAVVKELLRKHPPTYFTLTHSVTEPVKLAG-YDIPMDTNVEFFVHGISHDPNVWSDPEKFDPDRFLSGRE-DADITGVKEVKMMPFGVGRRICPGLGMATVHVNLMLARMVQEFEWFAYPGNNKVDFSEKLEFTVVMKNPLRAKVKLR 498          
BLAST of DN621336 vs. ExPASy Swiss-Prot
Match: C77A3_SOYBN (Cytochrome P450 77A3 OS=Glycine max GN=CYP77A3 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.259e-42
Identity = 93/199 (46.73%), Postives = 124/199 (62.31%), Query Frame = -2
Query:  117 GTDTTSTALQWIMANLVKHPHVQETVYTEIRXXXXXXXXXXXXELQKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFVLDDKYVIPKDGSVNFMVAEMGWDPKVWEDPMGFKPERFLNDHDQDFDITGSREIKMMPFGAGRRICPGFGLAMLHLEYFVANLVWNFEWTAVDGD-EVDLTEKQEFTVVMKNPLQALLSPR 710
            GTDTT+TA++W +A L+ +P+VQ  +Y EI+             ++KMPYL AV+ E LR+HPP HFVL HAVTE   L   Y IP D +V      +  DPK W +P  F PERF++   ++ DITG   +KMMPFG GRRICPG  +A +H+   +A +V  FEW A   + ++D T K EFTVVMK  L+A + PR
Sbjct:  311 GTDTTATAVEWGIAQLIANPNVQTKLYEEIKRTVGEKKVDEKD-VEKMPYLHAVVKELLRKHPPTHFVLTHAVTEPTTLGG-YDIPIDANVEVYTPAIAEDPKNWLNPEKFDPERFISG-GEEADITGVTGVKMMPFGVGRRICPGLAMATVHIHLMMARMVQEFEWGAYPPEKKMDFTGKWEFTVVMKESLRATIKPR 506          
BLAST of DN621336 vs. ExPASy Swiss-Prot
Match: C77A2_SOLME (Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77A2 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.113e-41
Identity = 88/198 (44.44%), Postives = 120/198 (60.61%), Query Frame = -2
Query:  117 GTDTTSTALQWIMANLVKHPHVQETVYTEIRXXXXXXXXXXXXELQKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFVLDDKYVIPKDGSVNFMVAEMGWDPKVWEDPMGFKPERFLNDHDQDFDITGSREIKMMPFGAGRRICPGFGLAMLHLEYFVANLVWNFEWTAVDGDEVDLTEKQEFTVVMKNPLQALLSPR 710
            GTDTT+TA++W +  L+++P++Q  +Y EI+             ++KMPYL AV+ E LR+HPP +  L HAVTE   L   Y IP   +V   +  +  DP +W +P  F P+RF    + D DITG   +KM+PFG GRRICPG  +A +H+   +A LV  FEW   +   VD TEK EFTVVMKN L+A + PR
Sbjct:  316 GTDTTATAIEWAIGRLIENPNIQSQLYEEIKKTVGENKIDEKD-IEKMPYLNAVVKELLRKHPPTYMSLTHAVTEPAKLGG-YDIPTGVNVEIFLPGISDDPNLWSEPEKFDPDRFYLGKE-DADITGVSGVKMIPFGMGRRICPGLNMATVHVSLMLARLVQEFEWADPENTRVDFTEKLEFTVVMKNTLRAKIKPR 510          
BLAST of DN621336 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.341e-32
Identity = 74/201 (36.82%), Postives = 117/201 (58.21%), Query Frame = -2
Query:  117 GTDTTSTALQWIMANLVKHPHVQETVYTEIRXXXXXXXXXXXXELQKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFVLDDKYVIPKDGSVNFMVAEMGWDPKVWEDPMGFKPERFLNDHDQDFDITGSREIKMMPFGAGRRICPGFGLAMLHLEYFVANLVWNFEWTAVDG---DEVDLTEKQEFTVVMKNPLQALLSPR 710
            G DTT  +++W MA LV++P VQ+ +  E+             + Q +PYL+AV+ E LR HPP   +LPH  + +  +   Y IPK  +V   V  +  DPKVW +P+ ++PERFL   +++ DI GS + +++PFGAGRR+CPG  L +  +   + +L+ +FEW+  +G   ++V++ E       M  PLQA+  PR
Sbjct:  303 GMDTTVISVEWAMAELVRNPRVQKKLQEELDRVVGRDRVMLETDFQNLPYLQAVVKESLRLHPPTPLMLPHKASTNVKIGG-YDIPKGANVMVNVWAVARDPKVWSNPLEYRPERFL---EENIDIKGS-DFRVLPFGAGRRVCPGAQLGINLVASMIGHLLHHFEWSLPEGTRPEDVNMMESPGLVTFMGTPLQAVAKPR 498          
BLAST of DN621336 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.897e-32
Identity = 71/201 (35.32%), Postives = 113/201 (56.22%), Query Frame = -2
Query:  117 GTDTTSTALQWIMANLVKHPHVQETVYTEIRXXXXXXXXXXXXELQKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFVLDDKYVIPKDGSVNFMVAEMGWDPKVWEDPMGFKPERFLNDHDQDFDITGSREIKMMPFGAGRRICPGFGLAMLHLEYFVANLVWNFEWTAVDG---DEVDLTEKQEFTVVMKNPLQALLSPR 710
            G DTT+   +W MA ++K+P VQ+ V  E              +  ++PYL+ V+ E  R HPP   +LPH    D  +   Y IPK  +V+  V  +  DP VW++P  F+PERFL   ++D D+ G  + +++PFGAGRR+CPG  L +  +   +++L+ +F WT   G   +E+D++E       M+ P+QA+ +PR
Sbjct:  300 GMDTTAITAEWAMAEMIKNPRVQQKVQEEFDRVVGLDRILTEADFSRLPYLQCVVKESFRLHPPTPLMLPHRSNADVKIGG-YDIPKGSNVHVNVWAVARDPAVWKNPFEFRPERFL---EEDVDMKG-HDFRLLPFGAGRRVCPGAQLGINLVTSMMSHLLHHFVWTPPQGTKPEEIDMSENPGLVTYMRTPVQAVATPR 495          
BLAST of DN621336 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.897e-32
Identity = 72/201 (35.82%), Postives = 115/201 (57.21%), Query Frame = -2
Query:  117 GTDTTSTALQWIMANLVKHPHVQETVYTEIRXXXXXXXXXXXXELQKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFVLDDKYVIPKDGSVNFMVAEMGWDPKVWEDPMGFKPERFLNDHDQDFDITGSREIKMMPFGAGRRICPGFGLAMLHLEYFVANLVWNFEWTAVDG---DEVDLTEKQEFTVVMKNPLQALLSPR 710
            G DTT+ +++W MA L+++P VQ+ V  E+             +   +PYL+ V  E +R HPP   +LPH    + V    Y IPK  +V+  V  +  DP VW+DP+ F+PERFL   ++D D+ G  + +++PFG+GRR+CPG  L +      + +L+ +F WT  +G   +E+D+ E       M+ P+QA++SPR
Sbjct:  301 GMDTTAISVEWAMAELIRNPRVQQKVQEELDRVIGLERVMTEADFSNLPYLQCVTKEAMRLHPPTPLMLPHRANAN-VKVGGYDIPKGSNVHVNVWAVARDPAVWKDPLEFRPERFL---EEDVDMKG-HDFRLLPFGSGRRVCPGAQLGINLAASMLGHLLHHFCWTPPEGMKPEEIDMGENPGLVTYMRTPIQAVVSPR 496          
BLAST of DN621336 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 9.837e-31
Identity = 73/197 (37.06%), Postives = 108/197 (54.82%), Query Frame = -2
Query:  120 GTDTTSTALQWIMANLVKHPHVQETVYTEIRXXXXXXXXXXXXELQKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFVLDDKYVIPKDGSVNFMVAEMGWDPKVWEDPMGFKPERFLNDHDQDFDITGSREIKMMPFGAGRRICPGFGLAMLHLEYFVANLVWNFEWTAVDGDEVDLTEKQEFTVVMKNPLQALLSP 710
            G+DTT+  L W M  L+KHPHV E +  E+             ++ K+ YL A+I E LR +PP  F  P   TED  +   Y I K   +   + ++  DP VW DP+ FKPERFL+ H +D D+ G +  +++PFG+GRR+C G  L +  + Y +AN + +FE      + +D+TE  EF      PL+ L+ P
Sbjct:  341 GSDTTAGTLTWAMCLLLKHPHVLEKLKEELNTYIGKERCVNESDINKLVYLHAIIKETLRLYPPAPFSSPREFTEDCTIGG-YHIKKGTRLMPNLWKIHRDPSVWPDPLEFKPERFLSTH-KDVDVRG-QNFELLPFGSGRRMCAGMSLGLHMVHYILANFLHSFEILNPSPESIDVTEVLEFVTTKATPLEVLVKP 534          
BLAST of DN621336 vs. ExPASy Swiss-Prot
Match: C75A1_PETHY (Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida GN=CYP75A1 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.327e-30
Identity = 65/200 (32.50%), Postives = 119/200 (59.50%), Query Frame = -2
Query:  117 GTDTTSTALQWIMANLVKHPHVQETVYTEIRXXXXXXXXXXXXELQKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFVLDDKYVIPKDGSVNFMVAEMGWDPKVWEDPMGFKPERFLNDHDQDFDITGSREIKMMPFGAGRRICPGFGLAMLHLEYFVANLVWNFEWTAVDGDEVDLTEKQEFTVVMKN--PLQALLSPR 710
            GTDT+S+A++W +A ++K+P + +    E+             ++  +PYL+A+  E  R+HP     LP    E  ++D  Y IPK+  ++  +  +G DP+VWE+P+ F PERFL+  +   D  G+ + +++PFGAGRRIC G  + ++ +EY +  LV +F+W  +  + ++L  ++ F + ++   PL+A+++PR
Sbjct:  302 GTDTSSSAIEWALAEMMKNPAILKKAQAEMDQVIGRNRRLLESDIPNLPYLRAICKETFRKHPSTPLNLPRISNEPCIVDG-YYIPKNTRLSVNIWAIGRDPQVWENPLEFNPERFLSGRNSKIDPRGN-DFELIPFGAGRRICAGTRMGIVMVEYILGTLVHSFDW-KLPSEVIELNMEEAFGLALQKAVPLEAMVTPR 498          
BLAST of DN621336 vs. ExPASy Swiss-Prot
Match: C78A1_MAIZE (Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.423e-29
Identity = 78/202 (38.61%), Postives = 108/202 (53.47%), Query Frame = -2
Query:  114 GTDTTSTALQWIMANLVKHPHVQETVYTEIRXXXXXXXXXXXXELQKMPYLKAVILEGLRRHPPGHFV-LPHAVTEDFVLDDKYVIPKDGSVNFMVAEMGWDPKVWEDPMGFKPERFL-NDHDQDFDITGSREIKMMPFGAGRRICPGFGLAMLHLEYFVANLVWNFEWTAVDG-DEVDLTEKQEFTVVMKNPLQALLSPRT 710
            GTDTT+   +W MA LV+HP VQ  V  E+             ++ +MPYL+AV+ E LR HPPG  +      T D  L +  V+P   +    +  +  D  VW DP  F PERFL ++   D D+ G  ++++ PFGAGRR+CPG  L +  +  +VA LV  F+W   DG   V L E  + ++ MK PL A   PRT
Sbjct:  346 GTDTTALLTEWCMAELVRHPAVQARVRAEVDAAVGAGGCPTDADVARMPYLQAVVKETLRAHPPGPLLSWARLATADVPLCNGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGV-DLRLAPFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDGAAAVCLDEVLKLSLEMKTPLVAAAIPRT 546          
The following BLAST results are available for this feature:
BLAST of DN621336 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 456
Match NameE-valueIdentityDescription
C89A2_ARATH1.270e-7066.33Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CY... [more]
C77A1_SOLME1.279e-4649.25Cytochrome P450 77A1 (Fragment) OS=Solanum melonge... [more]
C77A3_SOYBN3.259e-4246.73Cytochrome P450 77A3 OS=Glycine max GN=CYP77A3 PE=... [more]
C77A2_SOLME2.113e-4144.44Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77... [more]
C98A1_SORBI2.341e-3236.82Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C98A3_ARATH8.897e-3235.32Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C98A2_SOYBN8.897e-3235.82Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C82A1_PEA9.837e-3137.06Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G... [more]
C75A1_PETHY8.327e-3032.50Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida G... [more]
C78A1_MAIZE2.423e-2938.61Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06J05_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006J05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621336 ID=DN621336; Name=DN621336; organism=Citrus sinensis; type=EST; length=711bp
TTTTTTTTTTTTTTGGTAATATAATTATGCCAATATTAATATAGAAGTCT
TACTTAATTTTTAAATGCATAATAATACTAATAATAATAATCAGGTGAGT
TATGTTCTTATCTAGTTCTAGGAGAAAGAAGAGCCTGCAATGGATTCTTC
ATCACAACGGTAAACTCTTGCTTCTCAGTCAAATCAACCTCATCACCATC
CACAGCCGTCCACTCAAAATTCCAAACCAAATTAGCCACAAAATACTCCA
AATGAAGCATAGCCAAACCAAAACCGGGACAGATTCTCCTGCCAGCTCCA
AATGGCATCATCTTAATTTCCCTACTCCCCGTTATGTCAAAATCTTGATC
ATGATCATTCAAAAACCTCTCGGGCTTAAACCCCATCGGATCCTCCCAAA
CTTTCGGATCCCAACCCATTTCGGCCACCATGAAATTCACACTCCCGTCC
TTTGGTATCACATACTTATCATCAAGAACGAAATCCTCTGTCACGGCATG
TGGCAACACGAAATGCCCAGGCGGGTGCCTCCTCAGTCCCTCTAAAATCA
CTGCTTTCAGATACGGCATCTTCTGCAACTCCTCCTCTTTCACCTCTTCA
TTTTCACCAACAACTCCTCTGATTTCCGTATAAACCGTCTCTTGAACGTG
CGGGTGCTTCACCAGATTGGCCATGATCCACTGTAGCGCCGTGGAGGTAG
TGTCAGTGCCC
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