EY720295

Overview
NameEY720295
Unique NameEY720295
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11175 contig Csv1_Contig11175:1..862. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY720295 vs. ExPASy Swiss-Prot
Match: IF4E3_ARATH (Eukaryotic translation initiation factor 4E type 3 OS=Arabidopsis thaliana GN=At5g18110 PE=2 SV=1)

HSP 1 Score: 353.599 bits (906), Expect = 8.254e-97
Identity = 169/223 (75.78%), Postives = 192/223 (86.10%), Query Frame = 3
Query:  114 MEITDKKESDINNTQTVADSVDNN---NKDAEERQARELKANLHPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHDASLRGYSSYRNTWLRG 773
            ME+ D+++ +I ++  + DS+ ++   +  +EER++RELK   HPL+ KF  WYTRRTPGVR Q SYEDNIKK+V+FSTVEGFW CYCHLAR SLLPSPTDLH FK+GIRPLWED ANCNGGKWIIRF KVVS RFWEDL+LALVGDQLD  DNICGAVLS+RFNEDI+SVWNRNASDHQAVM LRDSIKRHLKLPH+YVMEYKPHDASLR  SSYRNTWLRG
Sbjct:    1 MEVLDRRDDEIRDSGNM-DSIKSHYVTDSVSEERRSRELKDGDHPLRYKFSIWYTRRTPGVRNQ-SYEDNIKKMVEFSTVEGFWACYCHLARSSLLPSPTDLHFFKDGIRPLWEDGANCNGGKWIIRFSKVVSARFWEDLLLALVGDQLDDADNICGAVLSVRFNEDIISVWNRNASDHQAVMGLRDSIKRHLKLPHAYVMEYKPHDASLRDNSSYRNTWLRG 221          
BLAST of EY720295 vs. ExPASy Swiss-Prot
Match: IF4E2_HUMAN (Eukaryotic translation initiation factor 4E type 2 OS=Homo sapiens GN=EIF4E2 PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 1.056e-51
Identity = 97/208 (46.63%), Postives = 140/208 (67.31%), Query Frame = 3
Query:  126 DKKESDINNTQTVADSVD---NNNKDAEERQARELKANLHPLKNKFVFWYTRRTPGVRTQT-SYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHDASLR 737
            D  +++ N+TQ   +      + N+ + +R+A       HPL+  + FWY+RRTPG  T + SYE NIK+I  F++VE FW  Y H+ RP  L   +D HLFKEGI+P+WED AN NGGKWIIR +K ++ R WE+L+LA++G+Q   G+ ICGAV+S+RF EDI+S+WN+ ASD      +RD+++R L LP + +MEYK H  S++
Sbjct:   15 DHDQNEENSTQKDGEKEKTERDKNQSSSKRKAVVPGPAEHPLQYNYTFWYSRRTPGRPTSSQSYEQNIKQIGTFASVEQFWRFYSHMVRPGDLTGHSDFHLFKEGIKPMWEDDANKNGGKWIIRLRKGLASRCWENLILAMLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLNLPPNTIMEYKTHTDSIK 222          
BLAST of EY720295 vs. ExPASy Swiss-Prot
Match: IF4E2_MOUSE (Eukaryotic translation initiation factor 4E type 2 OS=Mus musculus GN=Eif4e2 PE=1 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 5.243e-51
Identity = 96/208 (46.15%), Postives = 139/208 (66.83%), Query Frame = 3
Query:  126 DKKESDINNTQTVADSVDNNNKDAE---ERQARELKANLHPLKNKFVFWYTRRTPGVRTQT-SYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHDASLR 737
            D  +++ N+TQ   +    +   ++   +R+A       HPL+  + FWY+RRTPG  T + SYE NIK+I  F++VE FW  Y H+ RP  L   +D HLFKEGI+P+WED AN NGGKWIIR +K ++ R WE+L+LA++G+Q   G+ ICGAV+S+RF EDI+S+WN+ ASD      +RD+++R L LP + +MEYK H  S++
Sbjct:   15 DHDQNEENSTQKDGEKEKTDRDKSQSSGKRKAVVPGPAEHPLQYNYTFWYSRRTPGRPTSSQSYEQNIKQIGTFASVEQFWKFYSHMVRPGDLTGHSDFHLFKEGIKPMWEDDANKNGGKWIIRLRKGLASRCWENLILAMLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLNLPPNTIMEYKTHTDSIK 222          
BLAST of EY720295 vs. ExPASy Swiss-Prot
Match: IF4E4_CAEEL (Eukaryotic translation initiation factor 4E-4 OS=Caenorhabditis elegans GN=ife-4 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 7.588e-42
Identity = 79/176 (44.89%), Postives = 110/176 (62.50%), Query Frame = 3
Query:  234 HPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHDASLRGYSSYRNT 761
            H L+  + F Y  R  G      Y   ++ +    +VE FW    H  RP+ +    D+H FK G++P+WED ANC GGKWIIR KK +S R WE+L++A++G+Q   GD +CGAV SIR  EDI+S+WNRNA D      +R++++  L+LP + V+EYK HD  LR  SSYR+T
Sbjct:   31 HQLQYSYTFSYFMRPTGKFDPEDYASYVQPVGIMKSVEQFWSIMVHFKRPTEMCDKADIHFFKTGVKPVWEDPANCKGGKWIIRLKKGLSTRIWENLLMAIIGEQFLVGDELCGAVCSIRNQEDIISLWNRNADDTPVTNRIRETLRSVLQLPQNTVLEYKRHDDCLRDQSSYRHT 206          
BLAST of EY720295 vs. ExPASy Swiss-Prot
Match: IF4E_DICDI (Eukaryotic translation initiation factor 4E OS=Dictyostelium discoideum GN=eif4e PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.532e-29
Identity = 74/226 (32.74%), Postives = 119/226 (52.65%), Query Frame = 3
Query:  120 ITDKKESDINNTQTV-ADSVDNNNKDA-------EERQARELKANL--HPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFK-KVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHDASLRGYSSYRNTW 764
            +T +  +  NNTQ    ++ DN NK+        EE+Q  E   NL  HPL+N++  WY  ++  +  +  + D++KK++ F +VE FW  + +L   S L   +  HLFK+ I P WE  +N  GGKW +  K K      W   V+A VG+  D  D ICG V + R N D +SVW + A D +A   + + +K+ L++  +  ++Y PH+  +R     +N +
Sbjct:   26 VTSETTTTTNNTQNKETETTDNINKEETADKENKEEQQQEENPENLIKHPLQNRWSLWYDYQSGKINPE-HWVDSLKKVISFDSVEDFWCVFNNLPNVSNLKQGSSYHLFKDDIEPKWEHESNKRGGKWFVMVKDKSRCDNQWLQSVMACVGETFDSSDEICGIVYNSRKNGDKISVWTKTAQDEKATRDVGNCLKKILEIDQT--IQYTPHEDFIRSSKGSKNLY 248          
BLAST of EY720295 vs. ExPASy Swiss-Prot
Match: IF4E1_ARATH (Eukaryotic translation initiation factor 4E-1 OS=Arabidopsis thaliana GN=EIF4E1 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.143e-28
Identity = 62/156 (39.74%), Postives = 94/156 (60.26%), Query Frame = 3
Query:  234 HPLKNKFVFWYTRRTPGVRT-QTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHS 698
            HPL++ + FW+    P V++ QTS+  +++ +  FSTVE FW  Y ++  PS L    D + FK  I P WED    NGGKW + F K  S + W   +LAL+G+Q D+GD ICGAV++IR  ++ +S+W +NAS+  A +++    K  L   +S
Sbjct:   60 HPLEHSWTFWFDN--PAVKSKQTSWGSSLRPVFTFSTVEEFWSLYNNMKHPSKLAHGADFYCFKHIIEPKWEDPICANGGKWTMTFPKEKSDKSWLYTLLALIGEQFDHGDEICGAVVNIRGKQERISIWTKNASNEAAQVSIGKQWKEFLDYNNS 213          
BLAST of EY720295 vs. ExPASy Swiss-Prot
Match: IF4E3_CAEEL (Eukaryotic translation initiation factor 4E-3 OS=Caenorhabditis elegans GN=ife-3 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.656e-28
Identity = 64/180 (35.56%), Postives = 105/180 (58.33%), Query Frame = 3
Query:  234 HPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKK----VVSGRFWEDLVLALVGDQLD-YGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPH-DASLRGYSSYR 755
            HPL+N++  WY +          +ED +K +  F TVE FW  Y H+     L   +D +LFKEGI+P+WED  N  GG+W++   K     +   +W +L++A+VG+Q D YGD ICGAV+++R   D +S+W R+A+     + +   +K+ L +P + ++ Y+ H D+S R  S+ +
Sbjct:   32 HPLQNRWALWYLKAD----RNKEWEDCLKMVSLFDTVEDFWSLYNHIQSAGGLNWGSDYYLFKEGIKPMWEDVNNVQGGRWLVVVDKQRRTQLLDHYWLELLMAIVGEQFDEYGDYICGAVVNVRQKGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPDTEILRYEVHKDSSARTSSTVK 207          
BLAST of EY720295 vs. ExPASy Swiss-Prot
Match: IF4E_DROME (Eukaryotic translation initiation factor 4E OS=Drosophila melanogaster GN=eIF-4E PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.064e-27
Identity = 64/201 (31.84%), Postives = 102/201 (50.75%), Query Frame = 3
Query:  129 KKESDINNTQTVADSVDNNNKDAEERQARELKANLHPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWII---RFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPH 722
            K + D   T   A +       A +   R      HPL N +  WY           S+ED   +I  F TVE FW  Y H+  PS +   +D  LFK+ IRP+WED+AN  GG+W+I   +  K      W D++L L+G+  D+ D ICGAV++IR   + +S+W  + ++ +A + +   ++  L+L  +  ++Y+ H
Sbjct:   46 KPKEDPQETGEPAGNTATTTAPAGDDAVRTEHLYKHPLMNVWTLWYLEND----RSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYSLFKKNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSDQICGAVINIRGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLH 242          
BLAST of EY720295 vs. ExPASy Swiss-Prot
Match: IF4E1_WHEAT (Eukaryotic translation initiation factor 4E-1 OS=Triticum aestivum PE=1 SV=3)

HSP 1 Score: 122.094 bits (305), Expect = 4.042e-27
Identity = 64/174 (36.78%), Postives = 93/174 (53.45%), Query Frame = 3
Query:  162 VADSVDNNNKDAEERQARELKANLHPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHL 683
            +AD  D ++  A  R         HPL+N + FW+     G   Q ++   I  I  FSTVE FW  Y ++  PS L    D H FK  I P WED    NGGKW I   +  S  FW   +LA++G+Q D+GD ICGAV+S+R  ++ +++W +NA++  A +++    K  L
Sbjct:   22 IADDGDGSSAAAAGR------ITAHPLENAWTFWFDN-PQGKSRQVAWGSTIHPIHTFSTVEDFWGLYNNIHNPSKLNVGADFHCFKNKIEPKWEDPICANGGKWTISCGRGKSDTFWLHTLLAMIGEQFDFGDEICGAVVSVRQKQERVAIWTKNAANEAAQISIGKQWKEFL 188          
BLAST of EY720295 vs. ExPASy Swiss-Prot
Match: I4E1B_HUMAN (Eukaryotic translation initiation factor 4E type 1B OS=Homo sapiens GN=EIF4E1B PE=2 SV=3)

HSP 1 Score: 122.094 bits (305), Expect = 4.042e-27
Identity = 70/231 (30.30%), Postives = 116/231 (50.22%), Query Frame = 3
Query:   93 KEKENQ*MEITDKKESDINNTQTVADSVDNNNKDAEERQARELKANLHPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKK----VVSGRFWEDLVLALVGDQL-DYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPH-DASLRGYSSYRNTWL 767
            +EKE +  E T   E   N+ +T+          A      E+K  LHPL+N++  W+ +         +++DN+  +    TVE FW  Y H+   S L S  D  LFK+GI+P+WEDS N  GG+W++   K    +   R W + +L L+G+   ++   +CGAV++IR   D ++VW R A +   V+ +    K  L L    ++ Y+ H D + +  S  +N ++
Sbjct:   19 EEKEEEAAERTPTGEKSPNSPRTLLSL----RGKARTGGPMEVKLELHPLQNRWALWFFKND----RSRAWQDNLHLVTKVDTVEDFWALYSHIQLASKLSSGCDYALFKDGIQPMWEDSRNKRGGRWLVSLAKQQRHIELDRLWLETLLCLIGESFEEHSREVCGAVVNIRTKGDKIAVWTREAENQAGVLHVGRVYKERLGLSPKTIIGYQAHADTATKSNSLAKNKFV 241          
The following BLAST results are available for this feature:
BLAST of EY720295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
IF4E3_ARATH8.254e-9775.78Eukaryotic translation initiation factor 4E type 3... [more]
IF4E2_HUMAN1.056e-5146.63Eukaryotic translation initiation factor 4E type 2... [more]
IF4E2_MOUSE5.243e-5146.15Eukaryotic translation initiation factor 4E type 2... [more]
IF4E4_CAEEL7.588e-4244.89Eukaryotic translation initiation factor 4E-4 OS=C... [more]
IF4E_DICDI2.532e-2932.74Eukaryotic translation initiation factor 4E OS=Dic... [more]
IF4E1_ARATH2.143e-2839.74Eukaryotic translation initiation factor 4E-1 OS=A... [more]
IF4E3_CAEEL3.656e-2835.56Eukaryotic translation initiation factor 4E-3 OS=C... [more]
IF4E_DROME1.064e-2731.84Eukaryotic translation initiation factor 4E OS=Dro... [more]
IF4E1_WHEAT4.042e-2736.78Eukaryotic translation initiation factor 4E-1 OS=T... [more]
I4E1B_HUMAN4.042e-2730.30Eukaryotic translation initiation factor 4E type 1... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-004-E10-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720295 ID=EY720295; Name=EY720295; organism=Citrus sinensis; type=EST; length=862bp
CCACGCGTCCGCCCACGCGTCCGTCTTCACTTCCCTTGTTTGGTTAAAAG
TGAGAAAATTAGGGCTTGAGGTGAAGAAGAACAAAATTTTAAAAAGAAAA
AGAAAATCAATAAATGGAAATAACAGATAAGAAGGAATCCGATATCAATA
ACACACAAACAGTCGCCGATTCCGTCGATAACAATAACAAAGACGCCGAA
GAACGCCAAGCTCGTGAACTTAAAGCCAATTTGCATCCTCTTAAGAACAA
GTTTGTCTTTTGGTACACTCGTCGAACACCTGGAGTTCGAACTCAAACAT
CCTATGAGGACAACATAAAGAAAATTGTGGACTTCAGTACTGTTGAAGGC
TTTTGGGTCTGCTATTGCCACTTGGCTCGTCCTTCTTTGTTGCCAAGCCC
TACAGATTTGCATCTTTTCAAGGAAGGAATTCGCCCATTATGGGAGGACT
CTGCAAATTGCAATGGCGGTAAATGGATAATAAGGTTCAAGAAAGTTGTA
TCAGGTCGCTTTTGGGAAGATCTGGTTCTTGCCTTGGTGGGTGACCAGCT
TGACTATGGTGATAACATATGTGGTGCAGTCCTAAGCATTCGATTCAATG
AAGATATATTGAGTGTGTGGAACCGCAATGCATCTGATCATCAGGCTGTG
ATGGCTCTTAGAGATTCTATCAAACGGCACTTAAAGCTGCCCCACAGCTA
TGTTATGGAATACAAGCCCCATGATGCTTCTCTGCGCGGATACTCGTCAT
ACAGAAACACATGGTTGAGAGGCTAGAATTTCACTAGGCTTTATGACACT
GCACTGATGGAGAAAGAACATGACAGTAGGGAGTCTTCTGGTTTTATTAC
ATGCTCTGGTTT
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