DN621308

Overview
NameDN621308
Unique NameDN621308
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9664 contig Csv1_Contig9664:627..1437. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621308 vs. ExPASy Swiss-Prot
Match: CPR5_CAEEL (Cathepsin B-like cysteine proteinase 5 OS=Caenorhabditis elegans GN=cpr-5 PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.146e-43
Identity = 87/182 (47.80%), Postives = 108/182 (59.34%), Query Frame = -3
Query:  231 YPISAWRYFVHHGVVTEE-------CDPYFDS------TGCSHPGC-EPAYPTPKCVRKCVKKNQL---WRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 725
            YPI AW+++V HG+VT         C PY  +       G   P C E   PTPKCV  C  KN     +   KH+  +AY +    E I  EI  NGP+EV+FTVYEDF  Y +GVY H  G  +GGHAVK++GWG  D+G  YW++AN WN +WG  GYF+I RG NECGIE   VAG+P
Sbjct:  158 YPIQAWKWWVKHGLVTGGSYETQFGCKPYSIAPCGETVNGVKWPACPEDTEPTPKCVDSCTSKNNYATPYLQDKHFGSTAYAVGKKVEQIQTEILTNGPIEVAFTVYEDFYQYTTGVYVHTAGASLGGHAVKILGWGV-DNGTPYWLVANSWNVAWGEKGYFRIIRGLNECGIEHSAVAGIP 338          
BLAST of DN621308 vs. ExPASy Swiss-Prot
Match: CATB_MACFA (Cathepsin B OS=Macaca fascicularis GN=CTSB PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.065e-42
Identity = 82/188 (43.62%), Postives = 118/188 (62.77%), Query Frame = -3
Query:  204 YPISAWRYFVHHGVVTEE-------CDPYFDSTGCSH------PGCEPAYPTPKCVRKCVKK-NQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNLVKEI 725
            YP  AW ++   G+V+         C PY     C H      P C     TPKC + C    +  ++  KHY  ++Y +++  +DIMAEIYKNGPVE +F+VY DF  YKSGVY+H+TG++MGGHA++++GWG  ++G  YW++AN WN  WG +G+FKI RG + CGIE +VVAG+P +    ++I
Sbjct:  154 YPAGAWNFWTRKGLVSGGLYDSHVGCRPY-SIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGV-ENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIPRTDQYWEKI 339          
BLAST of DN621308 vs. ExPASy Swiss-Prot
Match: CATB_HUMAN (Cathepsin B OS=Homo sapiens GN=CTSB PE=1 SV=3)

HSP 1 Score: 173.711 bits (439), Expect = 1.065e-42
Identity = 82/188 (43.62%), Postives = 118/188 (62.77%), Query Frame = -3
Query:  204 YPISAWRYFVHHGVVTEE-------CDPYFDSTGCSH------PGCEPAYPTPKCVRKCVKK-NQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNLVKEI 725
            YP  AW ++   G+V+         C PY     C H      P C     TPKC + C    +  ++  KHY  ++Y +++  +DIMAEIYKNGPVE +F+VY DF  YKSGVY+H+TG++MGGHA++++GWG  ++G  YW++AN WN  WG +G+FKI RG + CGIE +VVAG+P +    ++I
Sbjct:  154 YPAEAWNFWTRKGLVSGGLYESHVGCRPY-SIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGV-ENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIPRTDQYWEKI 339          
BLAST of DN621308 vs. ExPASy Swiss-Prot
Match: CATB_PONAB (Cathepsin B OS=Pongo abelii GN=CTSB PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.391e-42
Identity = 82/188 (43.62%), Postives = 117/188 (62.23%), Query Frame = -3
Query:  204 YPISAWRYFVHHGVVTEE-------CDPYFDSTGCSH------PGCEPAYPTPKCVRKCVKK-NQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNLVKEI 725
            YP  AW ++   G+V+         C PY     C H      P C     TPKC + C    +  ++  KHY  ++Y +++   DIMAEIYKNGPVE +F+VY DF  YKSGVY+H+TG++MGGHA++++GWG  ++G  YW++AN WN  WG +G+FKI RG + CGIE +VVAG+P +    ++I
Sbjct:  154 YPAEAWNFWTRKGLVSGGLYESHVGCRPY-SIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSERDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGV-ENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIPRTDQYWEKI 339          
BLAST of DN621308 vs. ExPASy Swiss-Prot
Match: CPR4_CAEEL (Cathepsin B-like cysteine proteinase 4 OS=Caenorhabditis elegans GN=cpr-4 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.047e-42
Identity = 85/181 (46.96%), Postives = 111/181 (61.33%), Query Frame = -3
Query:  231 YPISAWRYFVHHGVVTEE-------CDPYF-----DSTG-CSHPGC-EPAYPTPKCVRKCVKKNQ--LWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 725
            YPI+AW+Y V  G  T         C PY      ++ G  + P C +  Y TP CV KC  KN    +   KH+  +AY +      I AEI  +GPVE +FTVYEDF  YK+GVY H TG  +GGHA++++GWGT D+G  YW++AN WN +WG +GYF+I RG+NECGIE  VV G+P
Sbjct:  154 YPINAWKYLVKSGFCTGGSYEAQFGCKPYSLAPCGETVGNVTWPSCPDDGYDTPACVNKCTNKNYNVAYTADKHFGSTAYAVGKKVSQIQAEIIAHGPVEAAFTVYEDFYQYKTGVYVHTTGQELGGHAIRILGWGT-DNGTPYWLVANSWNVNWGENGYFRIIRGTNECGIEHAVVGGVP 333          
BLAST of DN621308 vs. ExPASy Swiss-Prot
Match: CYSP2_HAECO (Cathepsin B-like cysteine proteinase 2 OS=Haemonchus contortus GN=AC-2 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.285e-42
Identity = 85/187 (45.45%), Postives = 115/187 (61.50%), Query Frame = -3
Query:  216 YPISAWRYFVHHGVVT-------EECDPYFDSTGCSHPG-------CEPAYPTPKCVRKC---VKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNL 725
            +PI AW+YF++ GVV+       + C PY     C H G       C    PTP C RKC   V+K  ++R  K Y   AY +    + I +EI KNGPV  SF VYEDF HYKSG+YKH  G++ G HAVK+IGWG +++  D+W++AN W+  WG  GYF+I RGSN+CGIE  + AG+  +++L
Sbjct:  160 WPIEAWKYFIYDGVVSGGEYLTKDVCRPY-PIHPCGHHGNDTYYGECRGTAPTPPCKRKCRPGVRK--MYRIDKRYGKDAYIVKQSVKAIQSEILKNGPVVASFAVYEDFRHYKSGIYKHTAGELRGYHAVKMIGWG-NENNTDFWLIANSWHNDWGEKGYFRIVRGSNDCGIEGTIAAGIVDTESL 342          
BLAST of DN621308 vs. ExPASy Swiss-Prot
Match: CATB_RAT (Cathepsin B OS=Rattus norvegicus GN=Ctsb PE=1 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 6.903e-42
Identity = 82/182 (45.05%), Postives = 113/182 (62.09%), Query Frame = -3
Query:  222 YPISAWRYFVHHGVVTEE-------CDPYFDSTGCSH------PGCEPAYPTPKCVRKC-VKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSK 725
            YP  AW ++   G+V+         C PY     C H      P C     TPKC + C    +  ++  KHY  ++Y ++   ++IMAEIYKNGPVE +FTV+ DF  YKSGVYKH  GDVMGGHA++++GWG  ++G  YW++AN WN  WG +G+FKI RG N CGIE ++VAG+P ++
Sbjct:  154 YPSGAWNFWTRKGLVSGGVYNSHIGCLPY-TIPPCEHHVNGSRPPCTGEGDTPKCNKMCEAGYSTSYKEDKHYGYTSYSVSDSEKEIMAEIYKNGPVEGAFTVFSDFLTYKSGVYKHEAGDVMGGHAIRILGWGI-ENGVPYWLVANSWNVDWGDNGFFKILRGENHCGIESEIVAGIPRTQ 333          
BLAST of DN621308 vs. ExPASy Swiss-Prot
Match: CATB_PIG (Cathepsin B OS=Sus scrofa GN=CTSB PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 9.015e-42
Identity = 80/179 (44.69%), Postives = 112/179 (62.57%), Query Frame = -3
Query:  231 YPISAWRYFVHHGVVTEE-------CDPYFDSTGCSH------PGCEPAYPTPKCVRKCVKK-NQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 725
            +P  AW ++   G+V+         C PY     C H      P C     TPKC + C       ++  KH+  S+Y I+ + ++IMAEIYKNGPVE +FTVY DF  YKSGVY+H+TGD+MGGHA++++GWG  ++G  YW++ N WN  WG +G+FKI RG + CGIE ++VAG+P
Sbjct:  154 FPSGAWNFWTKKGLVSGGLYDSHVGCRPY-SIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYTPSYKEDKHFGCSSYSISRNEKEIMAEIYKNGPVEGAFTVYSDFLQYKSGVYQHVTGDLMGGHAIRILGWGV-ENGTPYWLVGNSWNTDWGDNGFFKILRGQDHCGIESEIVAGIP 330          
BLAST of DN621308 vs. ExPASy Swiss-Prot
Match: CYSP1_HAECO (Cathepsin B-like cysteine proteinase 1 OS=Haemonchus contortus GN=AC-1 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.426e-41
Identity = 83/187 (44.39%), Postives = 115/187 (61.50%), Query Frame = -3
Query:  216 YPISAWRYFVHHGVVT-------EECDPYFDSTGCSHPG-------CEPAYPTPKCVRKC---VKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNL 725
            +PI AW+YF++ GVV+       + C PY     C H G       C    PTP C RKC   V+K  ++R  K Y   AY +    + I +EI +NGPV  SF VYEDF HYKSG+YKH  G++ G HAVK+IGWG +++  D+W++AN W+  WG  GYF+I RG+N+CGIE  + AG+  +++L
Sbjct:  160 WPIEAWKYFIYDGVVSGGEYLTKDVCRPY-PIHPCGHHGNDTYYGECRGTAPTPPCKRKCRPGVRK--MYRIDKRYGKDAYIVKQSVKAIQSEILRNGPVVASFAVYEDFRHYKSGIYKHTAGELRGYHAVKMIGWG-NENNTDFWLIANSWHNDWGEKGYFRIIRGTNDCGIEGTIAAGIVDTESL 342          
BLAST of DN621308 vs. ExPASy Swiss-Prot
Match: CPR6_CAEEL (Cathepsin B-like cysteine proteinase 6 OS=Caenorhabditis elegans GN=cpr-6 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.844e-41
Identity = 85/190 (44.74%), Postives = 109/190 (57.37%), Query Frame = -3
Query:  204 PISAWRYFVHHGVVTEE-------CDPYFDSTGCSH--------PGCEPAYPTPKCVRKCVKK--NQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNLVKEI 722
            P++AWRY+V  G+VT         C PY     C H        P     YPTPKC +KCV    ++ +   K +  SAY +  D E I  E+  +GP+E++F VYEDF +Y  GVY H  G + GGHAVKLIGWG  DDG  YW +AN WN  WG DG+F+I RG +ECGIE  VV G+P   +L   +
Sbjct:  179 PLAAWRYWVKDGIVTGSNYTANNGCKPY-PFPPCEHHSKKTHFDPCPHDLYPTPKCEKKCVSDYTDKTYSEDKFFGASAYGVKDDVEAIQKELMTHGPLEIAFEVYEDFLNYDGGVYVHTGGKLGGGHAVKLIGWGI-DDGIPYWTVANSWNTDWGEDGFFRILRGVDECGIESGVVGGIPKLNSLTSRL 366          
The following BLAST results are available for this feature:
BLAST of DN621308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
CPR5_CAEEL2.146e-4347.80Cathepsin B-like cysteine proteinase 5 OS=Caenorha... [more]
CATB_MACFA1.065e-4243.62Cathepsin B OS=Macaca fascicularis GN=CTSB PE=2 SV... [more]
CATB_HUMAN1.065e-4243.62Cathepsin B OS=Homo sapiens GN=CTSB PE=1 SV=3[more]
CATB_PONAB1.391e-4243.62Cathepsin B OS=Pongo abelii GN=CTSB PE=2 SV=1[more]
CPR4_CAEEL4.047e-4246.96Cathepsin B-like cysteine proteinase 4 OS=Caenorha... [more]
CYSP2_HAECO5.285e-4245.45Cathepsin B-like cysteine proteinase 2 OS=Haemonch... [more]
CATB_RAT6.903e-4245.05Cathepsin B OS=Rattus norvegicus GN=Ctsb PE=1 SV=2[more]
CATB_PIG9.015e-4244.69Cathepsin B OS=Sus scrofa GN=CTSB PE=1 SV=1[more]
CYSP1_HAECO3.426e-4144.39Cathepsin B-like cysteine proteinase 1 OS=Haemonch... [more]
CPR6_CAEEL5.844e-4144.74Cathepsin B-like cysteine proteinase 6 OS=Caenorha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06I15_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006I15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621308 ID=DN621308; Name=DN621308; organism=Citrus sinensis; type=EST; length=811bp
GGGCCCCCTTTTTTTTTTAACACAACATTAAACTCCATTAATACATTCAA
TTATGCAAGACGGGAGCTTCCCATTTCATGCCTTGATAGCTTAGGTTCAA
CGATACACCCCTATAGCTACACATTTGATATATAAATAACAACATGAAGG
TATAGCAAAGTCTGCTCTCAAGCTGAAGCATCCTCAAACATATCTGCACT
TGTAATCTCTTTGACAAGATTTTTGGATGAAGGCAAACCAGCAACCACAT
CCTCTTCAATACCACACTCATTTGATCCTCTTTTAATCTTGAAGTAACCA
TCCGCACCCCAGCTTCTATTCCACTGATTAGCGAGAATCCAGTAATCCTC
GCCATCATCACTAGTTCCCCAACCAATAAGCTTAACAGCATGACCCCCCA
TTACATCGCCTGTGATGTGTTTGTAGACCCCAGATTTGTAGTGAGCAAAA
TCCTCATAAACTGTGAAGGAAACTTCAACTGGTCCATTCTTGTAAATTTC
TGCCATTATGTCCTCTGGATCAGAATTGATTCTATATGCACTAATACTGT
AGTGCTTTGAATTCCTCCAAAGCTGGTTTTTCTTGACGCACTTCCTCACA
CACTTTGGAGTAGGATATGCCGGCTCACAACCAGGGTGGGAACAGCCAGT
ACTATCAAAGTAGGGATCACACTCTTCGGTAACAACACCATGGTGGACAA
AGTATCGCCATGCAGAAATTGGATAACCCCCGTCACAACCATCTCCACAC
AAAAAGCCACAGCAGGCTAAAAGATCATTAACTGATAGAAATAGGTTCAT
GCCAAAATGGA
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