DN621304

Overview
NameDN621304
Unique NameDN621304
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length782
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6039 contig Csv1_Contig6039:1..782. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_ARATH (Octanoyltransferase OS=Arabidopsis thaliana GN=LIP2 PE=1 SV=1)

HSP 1 Score: 367.851 bits (943), Expect = 3.623e-101
Identity = 175/230 (76.09%), Postives = 200/230 (86.96%), Query Frame = 1
Query:   40 MKVPRSLQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDVIHEQLVSCFARQFGYDSLIWKDNVSILSD 729
            M+ PR+L++W+LG VNY  +LKLQEKLVS+RK H+I DTLLSLQHPPTYTLGKRRTDHNLLI E+EL K+GAELHYTQRGGDITFHGPHQAILYPIISLR IG GARNYVE LE +MIE AS+YGVKA  G K ETG+WVGDRKIGAIGVRI  GITSHGLA NIDPD+ YF+HIVPCGIADK+VTSLRRET   LP+E+VIHEQLVSC A+ F YD ++WK++ S++ D
Sbjct:    1 MRSPRTLEVWKLGTVNYLKSLKLQEKLVSERKAHQIPDTLLSLQHPPTYTLGKRRTDHNLLIPESELTKIGAELHYTQRGGDITFHGPHQAILYPIISLRSIGFGARNYVETLERSMIEFASIYGVKARAGNKCETGVWVGDRKIGAIGVRISSGITSHGLALNIDPDMKYFEHIVPCGIADKEVTSLRRETDTLLPSEEVIHEQLVSCLAKAFSYDDVVWKEDPSLILD 230          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_DESRM (Octanoyltransferase OS=Desulfotomaculum reducens (strain MI-1) GN=lipB PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.547e-43
Identity = 89/217 (41.01%), Postives = 135/217 (62.21%), Query Frame = 1
Query:   58 LQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDVIHEQLVSCFARQFGYDSLIWKD 708
            L + +LG ++Y DAL +QEKL+  R+ +K+ D +L LQHPPT TLG R   +N+L+ E ELK+ G  +  + RGGD+T+HGP Q + YPI+ L   G   R YV K+E T I++           +    G+W+G+ KI AIG  ++  +T HG AFN++ +L++F  I PCGI D+ VTSL++  G P   E V ++Q+++ F+R F ++  I  D
Sbjct:    3 LFVAKLGEIDYQDALTMQEKLLLLRQQNKVEDIMLLLQHPPTLTLGTRENRYNILVPEVELKRQGVNIFKSNRGGDVTYHGPGQIVGYPIVDLNGHGKSIREYVHKIEETFIQLLKEEYDLTASRESKYHGVWLGNEKITAIGCAVKRWVTMHGFAFNVNTNLSHFNLINPCGITDRGVTSLQKIFGQPQDMEKV-YKQVITYFSRVFDFEPEIIDD 218          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_CALS8 (Octanoyltransferase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=lipB PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.502e-41
Identity = 86/210 (40.95%), Postives = 130/210 (61.90%), Query Frame = 1
Query:   58 LQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIE-IASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDVIHEQLVSCFARQFG 684
            L +  L +V Y DAL LQE+L   R  +++ DTLL LQHPP  T+G+R    N+LIS+ +L ++G ++    RGGD+T+HGP Q + YPI  L  +G   + +V  LE   I  +   YG++A   +K  TG+WVG  KI AIG+ ++  IT HG AFN++ +L +F  I+PCG+ D+ VTSL +  G  +  +DV++ ++   F + FG
Sbjct:    3 LNVCYLEMVEYEDALHLQERLHKLRVANELEDTLLLLQHPPVITIGRRGKWENILISKEKLLQMGVKVFEVTRGGDVTYHGPGQIVGYPIFDLGTVGKDIKRFVWLLEEVFINLLKDEYGIEAYRDEKQYTGVWVGGEKIVAIGIAVKKWITMHGFAFNVNTNLEHFSWIIPCGLKDRGVTSLEKLLGHKVEFDDVVY-KVAKYFGKVFG 211          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_PORGI (Octanoyltransferase OS=Porphyromonas gingivalis GN=lipB PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 8.784e-39
Identity = 91/216 (42.13%), Postives = 126/216 (58.33%), Query Frame = 1
Query:   76 GIVNYSDALKLQEKLVSDRKIHKISD-----TLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVG------DRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAED--VIHEQLVSCFARQFG 684
            G + Y  AL LQ KL  D    K+ +     TLL  +H P  TLGK   + NLL+SE+ELK     L + +RGGDIT+HGP Q   YPI  L   G+G R+Y+E LE  +I++ +++G+K      G +G+W+        RKI AIGV+    IT HG A N++ DL+YFK I PCG +D+ VTS+ RE G     +D  ++ +QL + F R FG
Sbjct:  279 GRIGYESALTLQRKLFHDAVADKLENRKPQNTLLFCEHEPVLTLGKHGHEENLLLSESELKSRDIRLFHIERGGDITYHGPGQITGYPIFDLEQYGIGLRSYIEMLEQCIIDLIAIFGLKG-ERSAGASGVWLDPDIPGRTRKICAIGVKSSRHITMHGFALNVNTDLDYFKLINPCGFSDRGVTSISRELG---REQDFILVKQQLEAVFRRNFG 490          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_ANATD (Octanoyltransferase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=lipB PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.556e-38
Identity = 83/210 (39.52%), Postives = 128/210 (60.95%), Query Frame = 1
Query:   58 LQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIE-IASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDVIHEQLVSCFARQFG 684
            + +  LG V Y +AL +QE++ + R   KI DTLL L+HPP  T+G+R +  N+L+S+  LKK+  ++    RGGD+T+HGP Q + YPI  L       + +V  LE   I  +   +G +A   +   TG+WVG+ KI AIG+ ++  +T HG AFN++ +L +F  IVPCG+ D+ VTSL R  G  +  EDV+ +++ + F + FG
Sbjct:    3 INVCYLGEVEYQEALFIQERIWALRVEKKIGDTLLLLEHPPVITIGRRGSKKNILVSDEFLKKMDVKVFEVSRGGDVTYHGPGQLVGYPIFDLALTDRDIKKFVYLLEEVFIRLLKDQFGKEAHRDENKYTGVWVGNDKIVAIGIAVKKWVTMHGFAFNVNTNLEHFSWIVPCGLKDRGVTSLERLIGSTIRFEDVV-DKVQTYFGKVFG 211          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_ACIBL (Octanoyltransferase OS=Acidobacteria bacterium (strain Ellin345) GN=lipB PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.556e-38
Identity = 92/230 (40.00%), Postives = 131/230 (56.96%), Query Frame = 1
Query:   58 LQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIG--LGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDR---KIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDVIHEQLVSCFARQFGY---DSLIWKDNVSIL 723
            +Q+  LG V+Y+ A +LQ  LV  RK   I DTLL L+H P  T+G+     N++ S+  L + G EL    RGGD+TFHGP Q + YPI  LR +   +G   YV ++E  +I      G+      +G TG+W  +    KI AIGV I   +TSHG A N+  DL+YFK IVPCGI+DK VTS++ E G  L  E+V     +    R FG+   + ++W ++++ L
Sbjct:    2 IQVLNLGHVDYTTAQQLQTTLVDLRKRGVIQDTLLLLEHSPVITMGRNAKQKNIVASQEILAQRGVELIECDRGGDVTFHGPGQLVGYPIFDLRSLNPKIGVIEYVRRIEEVLIRSCGDLGIPT-TRVEGLTGVWTVNEPQAKIAAIGVHISRAVTSHGFALNVTTDLDYFKLIVPCGISDKPVTSMQHELGKSLTLEEV-----MPVITRNFGFIFKEQVLWLESLNDL 225          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_ALKMQ (Octanoyltransferase OS=Alkaliphilus metalliredigens (strain QYMF) GN=lipB PE=3 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 3.338e-38
Identity = 79/211 (37.44%), Postives = 124/211 (58.77%), Query Frame = 1
Query:   58 LQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDVIHEQLVSCFARQFGYD 690
            L +  LG   Y  AL++Q +L+  R+  +I DTL+ ++HPP  T G+   + N++ SEA L   G +L  T RGGD+T+HGP Q + YPI+++R   +G + +VE LE  +I +                G+WVG  KI AIG+ ++ G++ HG A N+  +L +FK +VPCGIAD+ VTS+    G P+    V ++ +++ F+  F YD
Sbjct:    3 LNVVNLGRCEYEKALQVQIELLEKRQRGEIEDTLILVEHPPVITKGRHADETNIIGSEASLINHGIQLFNTDRGGDVTYHGPGQIVGYPIVNIRKSKIGVKKFVENLEEVLIRLLDEKYHITATRSSVNPGVWVGANKIAAIGLAVKRGVSMHGFALNVSTNLAHFKFLVPCGIADRGVTSIEEILGYPVDFH-VANQHVLAYFSEVFNYD 212          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_ACIC5 (Octanoyltransferase OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=lipB PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.338e-38
Identity = 95/222 (42.79%), Postives = 126/222 (56.76%), Query Frame = 1
Query:   58 LQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIG-------LGARNYVEKLESTMIEIASLYGVKACPGQKGETGIW------VGDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDVIHEQLVSCFARQFG 684
            L +  LG + Y+  L+LQ +LV  R   +I +TLL L+HPP  TLG+     N+L S+  L   G E+H   RGGD+T+HGP Q + YPI+ LR          LGA  YV  +E  +I   + +GV+      G TG+W      V ++KI AIGV I  GITSHG A N+  DL  F  IVPCGI+D+ VTSL  E  I  PA  +  E+++   ARQFG
Sbjct:    3 LNLLHLGRIGYAQGLELQRQLVEARHSGRIGNTLLLLEHPPVLTLGRNSERKNVLASDEFLAYRGVEIHEVNRGGDVTYHGPGQLVGYPILDLRSFAESGERGRLGAVEYVRWVEEALIRTCADFGVQT-QRVAGRTGVWTLPGGSVEEKKIAAIGVHISRGITSHGFALNVTTDLRDFDLIVPCGISDRKVTSLELEV-IDEPA--LTMEKVIHSAARQFG 220          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_CHLAD (Octanoyltransferase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=lipB PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 7.436e-38
Identity = 86/210 (40.95%), Postives = 125/210 (59.52%), Query Frame = 1
Query:   52 RSLQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWV--GDRKIGAIGVRIQ-YGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDVIHEQLVSCFA 672
            R+L ++ LG ++Y+ A ++Q +L   R   +I DTLL L+HPPT TLG +    +++ + AEL   G  +  + RGG++T+H P Q + YPI  L   G     YV  LE ++I + + YG+       G TG+WV  G  KI AIGV++   G+T+HGLA N+DPDL+ F+ IVPCGI+D+ VTSL  E G   P  +V    + S  A
Sbjct:    2 RTLTVYHLGHIDYTAAWEMQRRLARQRSSGQIGDTLLLLEHPPTITLGNKARPEHIVATPAELAARGVVVVQSDRGGEVTYHAPGQLVAYPIFKLSQHGSDVGRYVRGLEESVIRVLAGYGITG-ERVNGLTGVWVRGGAAKICAIGVKLSASGVTTHGLALNVDPDLSGFELIVPCGISDRGVTSLAVELGKAPPMAEVADRLIASLCA 210          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_MYXXA (Octanoyltransferase OS=Myxococcus xanthus GN=lipB PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.826e-37
Identity = 84/215 (39.07%), Postives = 126/215 (58.60%), Query Frame = 1
Query:   55 SLQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVG------DRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDVIHEQLVSCFARQF 681
            ++ ++RLG V Y D L L       R+     D LL L+HPP  TLG+     N++ S+A+L K GAE+  T RGGD+T+HGP Q + YPI  L +     R YV  +E +++++ + +G+ A P  K   G+W+G       RKI AIGV +   +T+HG A N++ +L++F+ IVPCGI +  VTS++RE G  LP  +V  E + + F   F
Sbjct:    3 TITVYRLGRVEYEDGLALMHLFSESRRQGLSGDVLLLLEHPPILTLGRAAKRENIVASDAQLAKEGAEVFETNRGGDVTYHGPGQLVGYPIFLLPEDRRDVRRYVRDVERSVMQVLAQWGITAGPIPKW-PGVWIGAEGAPDARKIAAIGVHLSRWLTTHGFALNVNTNLDHFQLIVPCGIREAGVTSMQRELGRALPMAEV-EEAIANSFCTVF 215          
The following BLAST results are available for this feature:
BLAST of DN621304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 436
Match NameE-valueIdentityDescription
LIPB_ARATH3.623e-10176.09Octanoyltransferase OS=Arabidopsis thaliana GN=LIP... [more]
LIPB_DESRM1.547e-4341.01Octanoyltransferase OS=Desulfotomaculum reducens (... [more]
LIPB_CALS85.502e-4140.95Octanoyltransferase OS=Caldicellulosiruptor saccha... [more]
LIPB_PORGI8.784e-3942.13Octanoyltransferase OS=Porphyromonas gingivalis GN... [more]
LIPB_ANATD2.556e-3839.52Octanoyltransferase OS=Anaerocellum thermophilum (... [more]
LIPB_ACIBL2.556e-3840.00Octanoyltransferase OS=Acidobacteria bacterium (st... [more]
LIPB_ALKMQ3.338e-3837.44Octanoyltransferase OS=Alkaliphilus metalliredigen... [more]
LIPB_ACIC53.338e-3842.79Octanoyltransferase OS=Acidobacterium capsulatum (... [more]
LIPB_CHLAD7.436e-3840.95Octanoyltransferase OS=Chloroflexus aggregans (str... [more]
LIPB_MYXXA2.826e-3739.07Octanoyltransferase OS=Myxococcus xanthus GN=lipB ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06I13_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006I13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621304 ID=DN621304; Name=DN621304; organism=Citrus sinensis; type=EST; length=782bp
CCCCCTTCTCCTGACGGCCTGTATTTGTATTATCAGGGAATGAAAGTTCC
ACGGAGTTTACAGATCTGGAGACTGGGCATTGTCAACTACTCCGATGCAC
TTAAGCTGCAGGAAAAACTGGTCTCTGATAGAAAAATTCATAAGATTTCT
GATACCCTCTTGTCCCTTCAGCATCCACCCACGTATACCCTTGGAAAACG
GCGTACGGATCATAATTTATTAATTTCTGAGGCTGAACTGAAAAAGTTAG
GAGCTGAACTTCATTACACTCAGAGAGGAGGAGACATTACATTTCATGGT
CCCCACCAAGCAATTCTGTATCCCATTATTTCCCTTCGTGATATTGGACT
TGGTGCTCGAAATTATGTGGAGAAACTTGAGTCAACTATGATTGAAATAG
CATCACTATATGGAGTTAAAGCTTGCCCTGGACAAAAGGGTGAGACAGGA
ATTTGGGTTGGAGATAGAAAGATAGGTGCAATTGGAGTTCGGATACAATA
TGGAATTACTTCCCATGGGTTGGCATTCAACATAGATCCTGATTTGAACT
ATTTTAAGCATATCGTGCCTTGTGGGATTGCAGATAAAGATGTCACATCT
TTGAGAAGGGAGACAGGTATTCCGCTTCCTGCTGAAGATGTAATTCATGA
GCAGTTAGTTTCTTGTTTTGCTAGACAGTTTGGCTATGATAGTCTTATCT
GGAAGGATAATGTCTCAATATTGTCAGATAATTAGGAAGTCAATTGAGAT
GTATAGTATGCCTGGCAAATAAATCATGTAAA
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