DN621293

Overview
NameDN621293
Unique NameDN621293
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length699
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DN621293 vs. ExPASy Swiss-Prot
Match: PAO_ARATH (Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana GN=PAO PE=1 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.686e-49
Identity = 98/149 (65.77%), Postives = 117/149 (78.52%), Query Frame = -1 
Query:  259 SKSMEGSE-DVNKEYTKITFTPTQADRFVLAFRNWLRRHGNSQPEWFGFS-SQQPSPSTVLSKRQMLDRFEQHTLKCSSCREAYSAFQTGQKFLIGATVAFCATAGIPSDLQSRIVXXXXXXXXXXXXXXLHELQKNFVFVDYVHAEID 699
            +KSME  + DVNK+YTK+TFTPTQADRFVLAFRNWLRRHG SQPEWFG + S QP PSTVL+KRQMLDRF+QHT  CSSC+ AY++FQ  +KFL+GATV + ATAG+PSD+Q R+V              LHE +KNFVF DYVH+EI+
Sbjct:  389 AKSMESPDYDVNKQYTKLTFTPTQADRFVLAFRNWLRRHGKSQPEWFGSTPSNQPLPSTVLTKRQMLDRFDQHTQVCSSCKGAYNSFQILKKFLVGATVFWAATAGVPSDVQIRLVLAGLSLISAASAYALHEQEKNFVFRDYVHSEIE 537
The following BLAST results are available for this feature:
BLAST of DN621293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PAO_ARATH2.686e-4965.77Pheophorbide a oxygenase, chloroplastic OS=Arabido... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_06I07_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006I07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621293 ID=DN621293; Name=DN621293; organism=Citrus sinensis; type=EST; length=699bp
TTTTTTTTGACAAAGTGTATATTGTTTAATCCATTTACTCATGAATTTGG
ATCCATGTCTGCACATATTTATCTGATGACATTCATTTGGCACAAAAACA
AAGGGAATACTGAGGAAACACTCTAAGCTTAGCTATCACACTGATTTCTA
TCTAATAGATATATACAAACTCGCAAATTTTGACAAGATTTATCACCATA
TCTTTCTTATACCTCTGGACACAATGATTCTTTCAGCAGCATATCTACTC
CCTCTCTAATCGATTTCAGCATGCACATAATCAACAAACACAAAATTCTT
TTGTAGTTCATGCAAAGCATAAGCCAAGGCAGCGCTCACTAGCGCAAGCC
CAGCCAAAACAATCCGTGATTGCAAATCTGAAGGAATCCCAGCTGTTGCA
CAGAATGCAACAGTCGCGCCAATGAGAAACTTTTGCCCCGTCTGGAATGC
TGAATAAGCTTCTCTACATGATGAACACTTGAGGGTGTGTTGCTCAAATC
TATCGAGCATCTGTCGTTTCGACAAGACTGTTGATGGGGAAGGTTGTTGG
CTGCTGAAGCCAAACCATTCAGGTTGGCTGTTGCCGTGTCGCCTCAGCCA
ATTTCTAAATGCCAACACAAACCGATCTGCCTGTGTGGGTGTAAATGTAA
TTTTTGTGTACTCCTTGTTAACATCTTCAGAACCTTCCATCGATTTTGA
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