DN621292

Overview
NameDN621292
Unique NameDN621292
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length347
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4843 contig Csv1_Contig4843:1..347. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621292 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSJ (Heat shock protein 81-1 OS=Oryza sativa subsp. japonica GN=HSP81-1 PE=2 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 8.362e-39
Identity = 75/82 (91.46%), Postives = 80/82 (97.56%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLW 247
            AYLVAE+V+VT KHNDDEQY+WESQAGGSFTVTRDTSGE LGRGTKITL+LK+DQLEYLEERRLKDLIKKHSEFISYPISLW
Sbjct:  129 AYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLIKKHSEFISYPISLW 210          
BLAST of DN621292 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSI (Heat shock protein 81-1 OS=Oryza sativa subsp. indica GN=HSP81-1 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 8.362e-39
Identity = 75/82 (91.46%), Postives = 80/82 (97.56%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLW 247
            AYLVAE+V+VT KHNDDEQY+WESQAGGSFTVTRDTSGE LGRGTKITL+LK+DQLEYLEERRLKDLIKKHSEFISYPISLW
Sbjct:  129 AYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLIKKHSEFISYPISLW 210          
BLAST of DN621292 vs. ExPASy Swiss-Prot
Match: HSP80_SOLLC (Heat shock cognate protein 80 OS=Solanum lycopersicum GN=HSC80 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 8.362e-39
Identity = 75/83 (90.36%), Postives = 80/83 (96.39%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWI 250
            AYLVAEKV+VT KHNDDEQY+WESQAGGSFTVTRDTSGE LGRGTK+ L+LKEDQLEYLEERRLKDLIKKHSEFISYPISLW+
Sbjct:  128 AYLVAEKVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGENLGRGTKMVLYLKEDQLEYLEERRLKDLIKKHSEFISYPISLWV 210          
BLAST of DN621292 vs. ExPASy Swiss-Prot
Match: HSP83_ORYSJ (Heat shock protein 81-3 OS=Oryza sativa subsp. japonica GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 1.092e-38
Identity = 74/82 (90.24%), Postives = 80/82 (97.56%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLW 247
            AYLVAE+V+VT KHNDDEQY+WESQAGGSFTVTRDTSGE LGRGTKITL+LK+DQLEYLEERRLKDL+KKHSEFISYPISLW
Sbjct:  129 AYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLVKKHSEFISYPISLW 210          
BLAST of DN621292 vs. ExPASy Swiss-Prot
Match: HSP82_ORYSJ (Heat shock protein 81-2 OS=Oryza sativa subsp. japonica GN=HSP81-2 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.092e-38
Identity = 74/82 (90.24%), Postives = 80/82 (97.56%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLW 247
            AYLVAE+V+VT KHNDDEQY+WESQAGGSFTVTRDTSGE LGRGTKITL+LK+DQLEYLEERRLKDL+KKHSEFISYPISLW
Sbjct:  129 AYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLVKKHSEFISYPISLW 210          
BLAST of DN621292 vs. ExPASy Swiss-Prot
Match: HSP82_ARATH (Heat shock protein 81-2 OS=Arabidopsis thaliana GN=HSP81-2 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.092e-38
Identity = 74/83 (89.16%), Postives = 80/83 (96.39%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWI 250
            AYLVA+KV+VT KHNDDEQY+WESQAGGSFTVTRDTSGE LGRGTK+ L+LKEDQLEYLEERRLKDL+KKHSEFISYPISLWI
Sbjct:  128 AYLVADKVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGETLGRGTKMVLYLKEDQLEYLEERRLKDLVKKHSEFISYPISLWI 210          
BLAST of DN621292 vs. ExPASy Swiss-Prot
Match: HSP83_ARATH (Heat shock protein 81-3 OS=Arabidopsis thaliana GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 3.177e-38
Identity = 72/83 (86.75%), Postives = 80/83 (96.39%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWI 250
            AYLVA+KV+VT KHNDDEQY+WESQAGGSFTVTRDTSGE LGRGTK+ L+LKEDQ+EY+EERRLKDL+KKHSEFISYPISLWI
Sbjct:  128 AYLVADKVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEALGRGTKMVLYLKEDQMEYIEERRLKDLVKKHSEFISYPISLWI 210          
BLAST of DN621292 vs. ExPASy Swiss-Prot
Match: HSP83_IPONI (Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 2.690e-37
Identity = 74/82 (90.24%), Postives = 76/82 (92.68%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLW 247
            AYLVAEKVIVT KHNDDEQYIWESQAGGSFTVTRD  GE LGRGTKITL LKEDQLEYLEERR+KDL+KKHSEFISYPI LW
Sbjct:  133 AYLVAEKVIVTTKHNDDEQYIWESQAGGSFTVTRDVDGEQLGRGTKITLFLKEDQLEYLEERRIKDLVKKHSEFISYPIYLW 214          
BLAST of DN621292 vs. ExPASy Swiss-Prot
Match: HSP81_ARATH (Heat shock protein 81-1 OS=Arabidopsis thaliana GN=HSP81-1 PE=1 SV=3)

HSP 1 Score: 152.14 bits (383), Expect = 7.826e-37
Identity = 72/82 (87.80%), Postives = 76/82 (92.68%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLW 247
            AYLVAEKV+VT KHNDDEQY+WESQAGGSFTVTRD  GE LGRGTKITL LK+DQLEYLEERRLKDL+KKHSEFISYPI LW
Sbjct:  128 AYLVAEKVVVTTKHNDDEQYVWESQAGGSFTVTRDVDGEPLGRGTKITLFLKDDQLEYLEERRLKDLVKKHSEFISYPIYLW 209          
BLAST of DN621292 vs. ExPASy Swiss-Prot
Match: HSP82_MAIZE (Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 3.884e-36
Identity = 70/82 (85.37%), Postives = 77/82 (93.90%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLW 247
            AYLVA++V+VT KHNDDEQY+WESQAGGSFTVT DT+GE LGRGTKITL LK+DQLEYLEERRLKDL+KKHSEFISYPI LW
Sbjct:  139 AYLVADRVMVTTKHNDDEQYVWESQAGGSFTVTHDTTGEQLGRGTKITLFLKDDQLEYLEERRLKDLVKKHSEFISYPIYLW 220          
The following BLAST results are available for this feature:
BLAST of DN621292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
HSP81_ORYSJ8.362e-3991.46Heat shock protein 81-1 OS=Oryza sativa subsp. jap... [more]
HSP81_ORYSI8.362e-3991.46Heat shock protein 81-1 OS=Oryza sativa subsp. ind... [more]
HSP80_SOLLC8.362e-3990.36Heat shock cognate protein 80 OS=Solanum lycopersi... [more]
HSP83_ORYSJ1.092e-3890.24Heat shock protein 81-3 OS=Oryza sativa subsp. jap... [more]
HSP82_ORYSJ1.092e-3890.24Heat shock protein 81-2 OS=Oryza sativa subsp. jap... [more]
HSP82_ARATH1.092e-3889.16Heat shock protein 81-2 OS=Arabidopsis thaliana GN... [more]
HSP83_ARATH3.177e-3886.75Heat shock protein 81-3 OS=Arabidopsis thaliana GN... [more]
HSP83_IPONI2.690e-3790.24Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=... [more]
HSP81_ARATH7.826e-3787.80Heat shock protein 81-1 OS=Arabidopsis thaliana GN... [more]
HSP82_MAIZE3.884e-3685.37Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06I06_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006I06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621292 ID=DN621292; Name=DN621292; organism=Citrus sinensis; type=EST; length=347bp
AGCTTACTTGGTTGCTGAGAAGGTTATTGTTACCGCCAAGCACAACGATG
ATGAGCAGTACATCTGGGAGTCTCAGGCCGGTGGATCATTCACTGTTACC
AGGGACACTTCTGGTGAGCTTCTTGGCCGCGGTACAAAGATCACTCTCCA
CCTCAAGGAAGACCAACTTGAGTACCTTGAGGAGCGCCGTTTGAAGGATT
TGATTAAGAAGCACTCTGAGTTCATTAGTTACCCAATTTCCCTCTGGATT
GAGAAGACCACTGAGAAGGAGATTTCTGATGATGAGGACGAGGAAGAAAA
GAAAGATGAGGAGGGTAAAGTTGAGGATGTTGATGAAGAGAAAGAGA
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