DN621270

Overview
NameDN621270
Unique NameDN621270
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12567 contig Csv1_Contig12567:68..652. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621270 vs. ExPASy Swiss-Prot
Match: THI4_CITSI (Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.470e-82
Identity = 135/141 (95.74%), Postives = 136/141 (96.45%), Query Frame = 1
Query:   70 MAAMASTAFAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELTKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMV 492
            MAAMASTAFAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTD    GAGSAGLSCAYEL+KNPNIQIAIIEQSVSPGGGAWL GQLFSAMV
Sbjct:    1 MAAMASTAFAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMV 141          

HSP 2 Score: 61.6178 bits (148), Expect = 1.470e-82
Identity = 27/30 (90.00%), Postives = 30/30 (100.00%), Query Frame = 2
Query:  494 VRKPAHIFLDELGIDYDEQDSYIVIKHASL 583
            VRKPAHIFLDELGIDYDEQD+Y+VIKHA+L
Sbjct:  142 VRKPAHIFLDELGIDYDEQDNYVVIKHAAL 171          
BLAST of DN621270 vs. ExPASy Swiss-Prot
Match: THI4_ALNGL (Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.165e-53
Identity = 83/119 (69.75%), Postives = 98/119 (82.35%), Query Frame = 1
Query:  136 SSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELTKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMV 492
            SSF+G P++PS +R+QP K+    ++S+S + SPPYDL  F FDPIKESIVSREMTRRYM DMITYADTD    GAGS+GL C YEL+KNP++Q+AIIEQSVSPGGGAWL GQLFS MV
Sbjct:   20 SSFYGTPLAPSSIRVQPTKAGAKPSISMSGAPSPPYDLKAFTFDPIKESIVSREMTRRYMMDMITYADTDVVVVGAGSSGLVC-YELSKNPSVQVAIIEQSVSPGGGAWLGGQLFSGMV 137          

HSP 2 Score: 59.3066 bits (142), Expect = 2.165e-53
Identity = 25/30 (83.33%), Postives = 30/30 (100.00%), Query Frame = 2
Query:  494 VRKPAHIFLDELGIDYDEQDSYIVIKHASL 583
            VRKPAH+FLDELGI+YDEQD+Y+VIKHA+L
Sbjct:  138 VRKPAHLFLDELGIEYDEQDNYVVIKHAAL 167          
BLAST of DN621270 vs. ExPASy Swiss-Prot
Match: THI4_ARATH (Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 3.999e-52
Identity = 92/142 (64.79%), Postives = 111/142 (78.17%), Query Frame = 1
Query:   70 MAAMASTAFAPSVSSTT-NKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELTKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMV 492
            MAA+AST    S+SST   +LFDSSFHG+ +S + + +      +P + S+ A+ +  YDLN F FDPIKESIVSREMTRRYMTDMITYA+TD    GAGSAGLS AYE++KNPN+Q+AIIEQSVSPGGGAWL GQLFSAM+
Sbjct:    1 MAAIASTL---SLSSTKPQRLFDSSFHGSAISAAPISI----GLKPRSFSVRATTAG-YDLNAFTFDPIKESIVSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMI 134          

HSP 2 Score: 56.225 bits (134), Expect = 3.999e-52
Identity = 22/30 (73.33%), Postives = 29/30 (96.67%), Query Frame = 2
Query:  494 VRKPAHIFLDELGIDYDEQDSYIVIKHASL 583
            VRKPAH+FLDE+G+ YDEQD+Y+V+KHA+L
Sbjct:  135 VRKPAHLFLDEIGVAYDEQDTYVVVKHAAL 164          
BLAST of DN621270 vs. ExPASy Swiss-Prot
Match: THI41_MAIZE (Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 3.855e-46
Identity = 84/139 (60.43%), Postives = 99/139 (71.22%), Query Frame = 1
Query:  109 SSTTNKLFDSSFHGAPMSPSLLRLQPIK----------SSRPNNLSISASAS-PPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELTKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMV 492
            ++  + L  SSF G+ + P+  R  P             + P   S+S S+S PPYDL +F+F PIKESIVSREMTRRYMTDMITYADTD    GAGSAGLSCAYEL+K+P + IAI+EQSVSPGGGAWL GQLFSAMV
Sbjct:    3 TAAASSLLKSSFAGSRL-PAATRTTPASLVVATGPRGAGAGPICASMSMSSSNPPYDLTSFRFSPIKESIVSREMTRRYMTDMITYADTDVVIVGAGSAGLSCAYELSKDPAVSIAIVEQSVSPGGGAWLGGQLFSAMV 140          

HSP 2 Score: 53.1434 bits (126), Expect = 3.855e-46
Identity = 22/30 (73.33%), Postives = 27/30 (90.00%), Query Frame = 2
Query:  494 VRKPAHIFLDELGIDYDEQDSYIVIKHASL 583
            VRKPAH+FLDELG+ YDE + Y+VIKHA+L
Sbjct:  141 VRKPAHLFLDELGVAYDEAEDYVVIKHAAL 170          
BLAST of DN621270 vs. ExPASy Swiss-Prot
Match: THI42_MAIZE (Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.449e-45
Identity = 83/137 (60.58%), Postives = 97/137 (70.80%), Query Frame = 1
Query:  109 SSTTNKLFDSSFHGAPMSPSLLRLQ---------PIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELTKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMV 492
            ++  + L  SSF G+ + PS  R           P     P   SIS S +PPYDL +F+F PIKESIVSREMTRRYMTDMIT+ADTD    GAGSAGLSCAYEL+K+P + +AI+EQSVSPGGGAWL GQLFSAMV
Sbjct:    3 TTAASSLLKSSFAGSRL-PSATRTTTPSSVAVATPRAGGGPIRASIS-SPNPPYDLTSFRFSPIKESIVSREMTRRYMTDMITHADTDVVIVGAGSAGLSCAYELSKDPTVSVAIVEQSVSPGGGAWLGGQLFSAMV 137          

HSP 2 Score: 51.9878 bits (123), Expect = 1.449e-45
Identity = 20/30 (66.67%), Postives = 27/30 (90.00%), Query Frame = 2
Query:  494 VRKPAHIFLDELGIDYDEQDSYIVIKHASL 583
            VR+PAH+FLDELG+ YDE + Y+V+KHA+L
Sbjct:  138 VRRPAHLFLDELGVGYDEAEDYVVVKHAAL 167          
BLAST of DN621270 vs. ExPASy Swiss-Prot
Match: THI2_SCHPO (Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.738e-29
Identity = 55/92 (59.78%), Postives = 70/92 (76.09%), Query Frame = 1
Query:  223 ASASPPYDLN-TFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYEL-TKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMV 492
            + A P Y L+ +F F PI+ES VSR MTRRY +D+  YA++D    GAGSAGL+ AY + T+ P+++IAIIE SV+PGGGAWL GQLFSAMV
Sbjct:   37 SKAYPTYSLDESFSFAPIRESTVSRAMTRRYFSDLDKYAESDIVIVGAGSAGLTAAYYIGTRRPDLKIAIIEASVAPGGGAWLGGQLFSAMV 128          

HSP 2 Score: 44.2838 bits (103), Expect = 1.738e-29
Identity = 16/30 (53.33%), Postives = 26/30 (86.67%), Query Frame = 2
Query:  494 VRKPAHIFLDELGIDYDEQDSYIVIKHASL 583
            VRKPA +FL+E+G+ Y+++  Y+V+KHA+L
Sbjct:  129 VRKPADLFLNEIGVPYEDEGDYVVVKHAAL 158          
BLAST of DN621270 vs. ExPASy Swiss-Prot
Match: THI4_UROFA (Thiazole biosynthetic enzyme, mitochondrial OS=Uromyces fabae GN=THI2 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.540e-27
Identity = 55/110 (50.00%), Postives = 70/110 (63.64%), Query Frame = 1
Query:  178 LQPIKSSRPNNLSISASA---SPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYEL-TKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVC 495
            + P+KS + +N +++  A    P  +L   KF PIKE  V R M RRY  DM   A +D    GAGSAGLSCAY L T  P+++I I+E +V+PGGG WL GQL SAMVC
Sbjct:   24 MDPLKSKQQSNATVNKPAFKPEPAVNLTPIKFAPIKEHQVQRAMVRRYFQDMEERAISDVIIVGAGSAGLSCAYALGTARPDLKITILESNVAPGGGCWLGGQLMSAMVC 133          

HSP 2 Score: 40.0466 bits (92), Expect = 1.540e-27
Identity = 14/29 (48.28%), Postives = 25/29 (86.21%), Query Frame = 2
Query:  497 RKPAHIFLDELGIDYDEQDSYIVIKHASL 583
            RKPA  FLD++G+ Y+++ +++V+KHA+L
Sbjct:  134 RKPADEFLDQVGVPYEDEGNFVVVKHAAL 162          
BLAST of DN621270 vs. ExPASy Swiss-Prot
Match: THI4_ASPOR (Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 2.612e-27
Identity = 53/80 (66.25%), Postives = 61/80 (76.25%), Query Frame = 1
Query:  256 FKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELTK-NPNIQIAIIEQSVSPGGGAWLSGQLFSAMV 492
            FKF PI+ES VSR MTRRY  D+  YA++D    GAGS GLS AY L K  P+++IAI+E SVSPGGGAWL GQLFSAMV
Sbjct:   48 FKFAPIRESQVSRAMTRRYFEDLDKYAESDVVIVGAGSCGLSTAYVLAKARPDLKIAIVEASVSPGGGAWLGGQLFSAMV 127          

HSP 2 Score: 40.4318 bits (93), Expect = 2.612e-27
Identity = 17/32 (53.12%), Postives = 26/32 (81.25%), Query Frame = 2
Query:  494 VRKPAHIFLDELGIDYDE--QDSYIVIKHASL 583
            +R+PA +FL+ELG+ Y+E    +Y+V+KHASL
Sbjct:  128 MRRPAEVFLNELGVPYEEDANPNYVVVKHASL 159          
BLAST of DN621270 vs. ExPASy Swiss-Prot
Match: THI4_FUSSH (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.501e-27
Identity = 53/80 (66.25%), Postives = 60/80 (75.00%), Query Frame = 1
Query:  256 FKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYEL-TKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMV 492
            FKF PI+ES VSR MTRRY  D+  YA++D    GAGS GLS  Y L  K P+++IAIIE SVSPGGGAWL GQLFSAMV
Sbjct:   48 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIVGAGSCGLSTRYILGKKRPDLKIAIIEASVSPGGGAWLGGQLFSAMV 127          

HSP 2 Score: 40.817 bits (94), Expect = 7.501e-27
Identity = 15/30 (50.00%), Postives = 25/30 (83.33%), Query Frame = 2
Query:  494 VRKPAHIFLDELGIDYDEQDSYIVIKHASL 583
            +RKPA  FL E+G+ Y+++ +Y+V+KHA+L
Sbjct:  128 MRKPADAFLREVGVPYEDEGNYVVVKHAAL 157          
BLAST of DN621270 vs. ExPASy Swiss-Prot
Match: THI4_FUSOX (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.280e-21
Identity = 53/80 (66.25%), Postives = 61/80 (76.25%), Query Frame = 1
Query:  256 FKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYEL-TKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMV 492
            FKF PI+ES VSR MTRRY  D+  YA++D    GAGS GLS AY L  K P+++IAIIE SVSPGGGAWL GQLFSAM+
Sbjct:   44 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIIGAGSCGLSAAYILGKKRPDLKIAIIEASVSPGGGAWLGGQLFSAMI 123          
The following BLAST results are available for this feature:
BLAST of DN621270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
THI4_CITSI1.470e-8295.74Thiazole biosynthetic enzyme, chloroplastic OS=Cit... [more]
THI4_ALNGL2.165e-5369.75Thiazole biosynthetic enzyme, chloroplastic OS=Aln... [more]
THI4_ARATH3.999e-5264.79Thiazole biosynthetic enzyme, chloroplastic OS=Ara... [more]
THI41_MAIZE3.855e-4660.43Thiazole biosynthetic enzyme 1-1, chloroplastic OS... [more]
THI42_MAIZE1.449e-4560.58Thiazole biosynthetic enzyme 1-2, chloroplastic OS... [more]
THI2_SCHPO1.738e-2959.78Thiazole biosynthetic enzyme, mitochondrial OS=Sch... [more]
THI4_UROFA1.540e-2750.00Thiazole biosynthetic enzyme, mitochondrial OS=Uro... [more]
THI4_ASPOR2.612e-2766.25Thiazole biosynthetic enzyme, mitochondrial OS=Asp... [more]
THI4_FUSSH7.501e-2766.25Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
THI4_FUSOX1.280e-2166.25Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06H19_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006H19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621270 ID=DN621270; Name=DN621270; organism=Citrus sinensis; type=EST; length=585bp
TGCTAATCAAATTACTTCTCATTATCAAACTTCTAAGCAGCAGGGGAAGG
AGGGGTAAAAAAAAAAAACATGGCAGCCATGGCTTCTACAGCTTTCGCTC
CTTCAGTTTCGTCTACCACCAATAAGCTCTTTGACTCATCCTTTCATGGG
GCTCCCATGTCACCTTCTCTTCTACGTCTTCAACCCATCAAATCTTCTCG
TCCCAACAACTTGTCCATTTCTGCTTCTGCTTCTCCTCCTTATGACTTGA
ACACTTTCAAGTTTGACCCCATCAAAGAATCCATTGTTTCTCGTGAAATG
ACGCGCAGGTACATGACGGACATGATCACTTATGCTGACACTGATGTGGT
AGTGGTTGGTGCTGGCTCTGCTGGCCTCTCTTGTGCTTATGAGCTCACCA
AAAACCCCAACATTCAGATTGCTATTATCGAACAGTCTGTTAGCCCCGGC
GGTGGCGCGTGGCTCAGTGGACAGCTCTTCTCTGCCATGGTGTGTGCGCA
AACCAGCCCACATCTTCCTTGACGAGCTTGGCATCGACTACGATGAGCAA
GACAGCTATATTGTGATCAAGCATGCATCGCTGTT
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