DN621261

Overview
NameDN621261
Unique NameDN621261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length611
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621261 vs. ExPASy Swiss-Prot
Match: HDHD3_DANRE (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Danio rerio GN=hdhd3 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.836e-13
Identity = 45/141 (31.91%), Postives = 72/141 (51.06%), Query Frame = 3
Query:  186 LRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVRPGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAQYRYQDVI 608
            +R +  DV  TLL  +  +G+ YC  A+  GL      +V   F+LAYK+ ++  P +G A  M + VWW   VRD+F + G  +D    +K+   +Y +F     + VF DS   L+     GL  G++SN   R + ++
Sbjct:    5 VRWVLWDVKDTLLKVRRSVGEQYCREAQQAGLQLSP-AQVETAFRLAYKQKSQLLPNYGRAQGMDSQVWWTGLVRDTFGQCGV-HDPALLDKLANNLYHNFCGPENWEVFSDSNSTLKSCTALGLKQGVVSNFDRRLEGIL 143          
BLAST of DN621261 vs. ExPASy Swiss-Prot
Match: HDHD3_BOVIN (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Bos taurus GN=HDHD3 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.007e-11
Identity = 42/147 (28.57%), Postives = 75/147 (51.02%), Query Frame = 3
Query:  168 MALLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVRPGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAQYRYQDVI 608
            MA   +LR +T DV  TLL  +  +G  Y   A++ GL   +   + + FK AYK  ++++P +G    + +  WW   V+ +F + G   D      I  ++Y  F S + + V   ++  LR  R++GL + ++SN   R +D++
Sbjct:    1 MAHRLQLRLLTWDVKDTLLRLRHPVGVEYATKARAHGLEV-EATALGQAFKQAYKAQSQSFPNYGLGHGLTSHQWWLDLVQQTFHQAGVR-DAQAVAPIAEQLYKDFSSPSTWQVLEGAEATLRGCRKRGLKLAVVSNFDRRLEDIL 145          
BLAST of DN621261 vs. ExPASy Swiss-Prot
Match: HDHD3_MOUSE (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Mus musculus GN=Hdhd3 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.718e-11
Identity = 39/147 (26.53%), Postives = 74/147 (50.34%), Query Frame = 3
Query:  168 MALLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVRPGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAQYRYQDVI 608
            MA   ++R +T DV  TL+  +  +G+ Y   A++ G+   D   V + F+ AY+  + N+P +G +  + +  WWK  V  +F   G   D      +  ++Y  F S   + V   ++  L+  R++GL + ++SN   R +D++
Sbjct:    1 MAHRLQMRLLTWDVKDTLIKLRRPVGEEYASKARAHGVVVEDIT-VEQAFRQAYRAQSHNFPNYGLSRGLTSRQWWKDVVLHTFRLAGVP-DAQAMTPVADQLYEDFSSPFTWQVLEGAEMTLKGCRKRGLKLAVVSNFDRRLEDIL 145          
BLAST of DN621261 vs. ExPASy Swiss-Prot
Match: HDHD3_XENTR (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Xenopus tropicalis GN=hdhd3 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.530e-11
Identity = 41/139 (29.50%), Postives = 70/139 (50.36%), Query Frame = 3
Query:  186 LRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVRPGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAQYRYQD 602
            LR IT D+  TLL  +  +G  Y   AK  GL C D   +   F+ AY+  ++ +P +G A  M +  WW   V  +F   G + D++T   + +++Y  F ++  + V P ++  L   +  GL + +ISN   R ++
Sbjct:    3 LRLITWDIKDTLLRVRVPVGQQYFAEAKRQGL-CMDPGSLETSFRNAYRTHSRLFPNYGLAQGMDSRQWWLDVVLQTFRLSGAE-DDETVRSVAQQLYQDFSTARNWAVVPGAREALDSCKGLGLKMAVISNFDRRLEE 139          
BLAST of DN621261 vs. ExPASy Swiss-Prot
Match: HDHD3_XENLA (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Xenopus laevis GN=hdhd3 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.530e-11
Identity = 41/141 (29.08%), Postives = 71/141 (50.35%), Query Frame = 3
Query:  186 LRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVRPGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAQYRYQDVI 608
            LR IT DV  TLL  +  +G  Y   AK  GL C +   +   F+ AY+  ++ +P +G A  M +  WW   V  +F   G + D DT + + +++Y  F ++  + + P ++  L      GL + +ISN   R ++++
Sbjct:    3 LRLITWDVKDTLLRVRVPVGQQYYAEAKKRGL-CVNPGTLETSFRNAYRSHSRLFPNYGLAQGMSSRQWWLDVVLQTFRLSGIE-DSDTVQSLAKQLYQDFSTAHNWALVPGAREALDSCTNLGLRMAVISNFDRRLEELL 141          
The following BLAST results are available for this feature:
BLAST of DN621261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
HDHD3_DANRE1.836e-1331.91Haloacid dehalogenase-like hydrolase domain-contai... [more]
HDHD3_BOVIN1.007e-1128.57Haloacid dehalogenase-like hydrolase domain-contai... [more]
HDHD3_MOUSE1.718e-1126.53Haloacid dehalogenase-like hydrolase domain-contai... [more]
HDHD3_XENTR6.530e-1129.50Haloacid dehalogenase-like hydrolase domain-contai... [more]
HDHD3_XENLA6.530e-1129.08Haloacid dehalogenase-like hydrolase domain-contai... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_06H14_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006H14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621261 ID=DN621261; Name=DN621261; organism=Citrus sinensis; type=EST; length=611bp
CTTTCTTCATTTTGAGCGTCTGGTTACATAATTTTTTGAATTCACCGAAG
AAACTGGTTGATCCACTATACTGAAGGGTCCAATTTGTGATAACCACAGA
ACTCTACTTATCTTGTTAAGCACATCAACTTTGTTCTATTTTAAGAATCC
ACTGCAAAGTTGTTGCAATGGCTTTACTGTCAAGATTGCGCTGCATCACT
GTGGATGTTACTGGTACTCTTCTAGCTTACAAAGGGGAGCTTGGTGACTA
TTATTGCATGGCAGCCAAATCTGTTGGACTGCCTTGTCCTGACTACAAAC
GTGTGCATGAGGGATTTAAGCTGGCATATAAAGAGATGGCCAAAAATTAT
CCCTGTTTTGGTTTTGCAGCCAAAATGCCCAACATTGTCTGGTGGAAGAC
TTGTGTCAGAGATTCTTTTGTCAGGCCAGGATATGATTATGATGAGGATA
CATTTGAGAAGATATTTAGACGCATATATGCATCATTTGGCTCATCTGCA
CCTTATACAGTCTTCCCAGACTCTCAACCATTCCTGAGATGGGCCCGCGA
AAAGGGTCTAATAGTGGGCATCATTAGCAATGCACAATACCGTTATCAGG
ATGTAATTCTT
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