DN621254

Overview
NameDN621254
Unique NameDN621254
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN621254_ssr43 microsatellite DN621254_ssr43:43..64. BLAST: Citrus ESTs to Prunus persica proteins V1
DN621254_ssr30 microsatellite DN621254_ssr30:30..45. BLAST: Citrus ESTs to Prunus persica proteins V1
DN621254_ssr46 microsatellite DN621254_ssr46:46..61. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig8379 contig Csv1_Contig8379:44..708. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 14310_SOLLC (14-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10 PE=2 SV=2)

HSP 1 Score: 314.694 bits (805), Expect = 2.734e-85
Identity = 160/191 (83.77%), Postives = 172/191 (90.05%), Query Frame = 2
Query:   92 MATTVPDNLTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            MA  +P+NL+REQ +YLAKLAEQAERYEEMV+FM KLV+ STPA ELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEE RKNEEHV LVKEYR KVE ELS VCA IL+LLE+NL+PSAT SESKVFYLKMKGDY+RY+AEFKIGDERK AAEDTM SYKAAQ+IA  DL PTHPIRLGLAL FSVFY
Sbjct:    1 MAALIPENLSREQCLYLAKLAEQAERYEEMVQFMDKLVLNSTPAGELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVHLVKEYRGKVENELSQVCAGILKLLESNLVPSATTSESKVFYLKMKGDYYRYLAEFKIGDERKQAAEDTMNSYKAAQEIALTDLPPTHPIRLGLALNFSVFY 191          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 1433B_SOYBN (14-3-3-like protein B (Fragment) OS=Glycine max GN=GF14B PE=2 SV=1)

HSP 1 Score: 314.309 bits (804), Expect = 3.570e-85
Identity = 157/185 (84.86%), Postives = 172/185 (92.97%), Query Frame = 2
Query:  110 DNLTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            + L REQYVYLA ++EQAERYEEMVEFMQK+VVGSTPA+ELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKN++HVSLVK YRSKVE EL+ VCA+IL LL++NL+PSA+ASESKVFYLKMKGDYHRY+AEFK+GDERK A EDTM SYKAAQDIA ADL PTHPIRLGLAL FSVFY
Sbjct:    2 EGLNREQYVYLANVSEQAERYEEMVEFMQKVVVGSTPASELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNDDHVSLVKHYRSKVENELTQVCATILSLLDSNLVPSASASESKVFYLKMKGDYHRYLAEFKVGDERKTATEDTMLSYKAAQDIASADLPPTHPIRLGLALNFSVFY 186          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 14338_ARATH (14-3-3-like protein GF14 kappa OS=Arabidopsis thaliana GN=GRF8 PE=2 SV=2)

HSP 1 Score: 311.612 bits (797), Expect = 2.314e-84
Identity = 160/191 (83.77%), Postives = 176/191 (92.15%), Query Frame = 2
Query:   92 MATTVPDNLTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            MATT    L+R+QYVY+AKLAEQAERYEEMV+FM++LV G+TPA ELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEE RKNEEHVSLVK+YRSKVE ELS +C+ ILRLL+++LIPSATASESKVFYLKMKGDYHRY+AEFK GDERK AAEDTM +YKAAQD+A ADLAPTHPIRLGLAL FSVFY
Sbjct:    1 MATT----LSRDQYVYMAKLAEQAERYEEMVQFMEQLVSGATPAGELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVSLVKDYRSKVETELSSICSGILRLLDSHLIPSATASESKVFYLKMKGDYHRYLAEFKSGDERKTAAEDTMIAYKAAQDVAVADLAPTHPIRLGLALNFSVFY 187          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 14336_ARATH (14-3-3-like protein GF14 lambda OS=Arabidopsis thaliana GN=GRF6 PE=1 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 4.365e-83
Identity = 155/183 (84.70%), Postives = 170/183 (92.90%), Query Frame = 2
Query:  116 LTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            L R+QYVY+AKLAEQAERYEEMV+FM++LV G+TPA ELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEE RKN+EHVSLVK+YRSKVE ELS VC+ IL+LL+++LIPSA ASESKVFYLKMKGDYHRYMAEFK GDERK AAEDTM +YKAAQDIA AD+APTHPIRLGLAL FSVFY
Sbjct:    5 LGRDQYVYMAKLAEQAERYEEMVQFMEQLVTGATPAEELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNDEHVSLVKDYRSKVESELSSVCSGILKLLDSHLIPSAGASESKVFYLKMKGDYHRYMAEFKSGDERKTAAEDTMLAYKAAQDIAAADMAPTHPIRLGLALNFSVFY 187          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 14331_SOLLC (14-3-3 protein 1 OS=Solanum lycopersicum GN=TFT1 PE=3 SV=2)

HSP 1 Score: 300.442 bits (768), Expect = 5.335e-81
Identity = 154/187 (82.35%), Postives = 173/187 (92.51%), Query Frame = 2
Query:  104 VPDNLTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            +P+NLTREQ +YLAKLAEQAERYEEMV+FM KLV+GS  ++ELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKN+EHV LVK+YRSKVE ELSDVCA IL++L+  LIPSA+A ESKVFYLKMKGDY+RY+AEFK+G+ERK AAEDTM +YKAAQDIA A+LAPTHPIRLGLAL FSVFY
Sbjct:    3 LPENLTREQCLYLAKLAEQAERYEEMVKFMDKLVIGSG-SSELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNDEHVVLVKDYRSKVESELSDVCAGILKILDQYLIPSASAGESKVFYLKMKGDYYRYLAEFKVGNERKEAAEDTMLAYKAAQDIAVAELAPTHPIRLGLALNFSVFY 188          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 1433D_TOBAC (14-3-3-like protein D OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 1.314e-79
Identity = 153/187 (81.82%), Postives = 170/187 (90.91%), Query Frame = 2
Query:  104 VPDNLTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            VP+NLTREQ +YLAKLAEQAERYEEMV+FM +LV  S  ++ELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHV LVK+YRSKVE ELSDVCA IL++L+  LIPSA A ESKVFYLKMKGDY+RY+AEFK+G+ERK AAEDTM +YKAAQDIA A+LAPTHPIRLGLAL +SVFY
Sbjct:    3 VPENLTREQCLYLAKLAEQAERYEEMVKFMDRLVAVSA-SSELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVVLVKDYRSKVESELSDVCAGILKILDQYLIPSAAAGESKVFYLKMKGDYYRYLAEFKVGNERKEAAEDTMLAYKAAQDIALAELAPTHPIRLGLALNYSVFY 188          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 14333_ORYSJ (14-3-3-like protein GF14-C OS=Oryza sativa subsp. japonica GN=GF14C PE=1 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 4.095e-73
Identity = 139/183 (75.96%), Postives = 161/183 (87.98%), Query Frame = 2
Query:  116 LTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            ++RE+ VY+AKLAEQAERYEEMVE+M+K V  +    ELTVEERNLLSVAYKNVIG+ RA+WRIVSSIEQKEEGR NEEHV+L+KEYR K+E ELS +C  IL+LL+++L+PS+TA+ESKVFYLKMKGDYHRY+AEFK G ERK AAE TM +YKAAQDIA ADLAPTHPIRLGLAL FSVFY
Sbjct:    1 MSREENVYMAKLAEQAERYEEMVEYMEK-VAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALNFSVFY 182          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 14332_SOLLC (14-3-3 protein 2 OS=Solanum lycopersicum GN=TFT2 PE=3 SV=2)

HSP 1 Score: 269.626 bits (688), Expect = 1.009e-71
Identity = 136/183 (74.32%), Postives = 157/183 (85.79%), Query Frame = 2
Query:  116 LTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            + RE+ VY+AKLAEQAERYEEMV+FM+K V  S  + ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE R NEEHV  +KEYRSK+E ELSD+C  IL+LL++NLIPSA+  +SKVFYLKMKGDYHRY+AEFK G ERK AAE T+ +YKAAQDIA  +LAPTHPIRLGLAL FSVFY
Sbjct:    1 MAREENVYMAKLAEQAERYEEMVQFMEK-VSTSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEEHVKCIKEYRSKIESELSDICDGILKLLDSNLIPSASNGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLSAYKAAQDIANTELAPTHPIRLGLALNFSVFY 182          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 14336_SOLLC (14-3-3 protein 6 OS=Solanum lycopersicum GN=TFT6 PE=2 SV=2)

HSP 1 Score: 268.47 bits (685), Expect = 2.247e-71
Identity = 133/181 (73.48%), Postives = 156/181 (86.19%), Query Frame = 2
Query:  122 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            RE+ VY+AKLAEQAERYEEMVEFM+K+V  +  A ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE R NE+HV+ +KEYRSK+E EL+ +C  IL+LL++ LI SA   +SKVFYLKMKGDYHRY+AEFK G ERK AAE+T+ +YKAAQDIA A+LAPTHPIRLGLAL FSVFY
Sbjct:    5 REENVYMAKLAEQAERYEEMVEFMEKVVAAADGAEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKEYRSKIESELTSICNGILKLLDSKLIGSAATGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFY 185          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 14335_SOLTU (14-3-3-like protein 16R OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 2.247e-71
Identity = 133/181 (73.48%), Postives = 156/181 (86.19%), Query Frame = 2
Query:  122 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            RE+ VY+AKLAEQAERYEEMVEFM+K+V  +  A ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE R NE+HV+ +KEYRSK+E EL+ +C  IL+LL++ LI SA   +SKVFYLKMKGDYHRY+AEFK G ERK AAE+T+ +YKAAQDIA A+LAPTHPIRLGLAL FSVFY
Sbjct:    5 REENVYMAKLAEQAERYEEMVEFMEKVVAAADGAEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKEYRSKIESELTSICNGILKLLDSKLIGSAATGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFY 185          
The following BLAST results are available for this feature:
BLAST of DN621254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
14310_SOLLC2.734e-8583.7714-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10... [more]
1433B_SOYBN3.570e-8584.8614-3-3-like protein B (Fragment) OS=Glycine max GN... [more]
14338_ARATH2.314e-8483.7714-3-3-like protein GF14 kappa OS=Arabidopsis thal... [more]
14336_ARATH4.365e-8384.7014-3-3-like protein GF14 lambda OS=Arabidopsis tha... [more]
14331_SOLLC5.335e-8182.3514-3-3 protein 1 OS=Solanum lycopersicum GN=TFT1 P... [more]
1433D_TOBAC1.314e-7981.8214-3-3-like protein D OS=Nicotiana tabacum PE=2 SV... [more]
14333_ORYSJ4.095e-7375.9614-3-3-like protein GF14-C OS=Oryza sativa subsp. ... [more]
14332_SOLLC1.009e-7174.3214-3-3 protein 2 OS=Solanum lycopersicum GN=TFT2 P... [more]
14336_SOLLC2.247e-7173.4814-3-3 protein 6 OS=Solanum lycopersicum GN=TFT6 P... [more]
14335_SOLTU2.247e-7173.4814-3-3-like protein 16R OS=Solanum tuberosum PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06H10_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621254 ID=DN621254; Name=DN621254; organism=Citrus sinensis; type=EST; length=665bp
CTGAATTTTCACAAATCGCAACGCAAGCCGTCTGTCTGTCTGTCTCTCTC
TCTCTCTCTCTCTCATCACACTTTCAGAGCCTGTGAAAAAGATGGCGACA
ACAGTTCCGGACAACCTGACGAGAGAGCAGTACGTGTACTTAGCCAAGCT
AGCCGAGCAAGCCGAGCGTTACGAAGAGATGGTGGAGTTCATGCAGAAGC
TGGTTGTCGGCTCGACTCCAGCCGCCGAGCTGACGGTCGAGGAGCGAAAC
CTCCTCTCAGTGGCCTACAAGAACGTAATCGGCTCACTCCGCGCCGCGTG
GCGCATCGTGTCGTCGATCGAGCAGAAGGAGGAGGGGAGGAAGAACGAGG
AACACGTGTCGCTCGTGAAAGAGTACAGATCGAAGGTGGAGAAGGAGCTT
TCGGATGTGTGCGCGAGTATTTTGAGGTTGTTGGAAGCGAATTTGATTCC
GTCGGCTACGGCGAGTGAGTCCAAAGTGTTTTATTTGAAAATGAAGGGAG
ATTATCATCGTTACATGGCCGAGTTTAAGATTGGCGATGAGCGGAAAGCC
GCCGCTGAAGACACTATGCAATCTTACAAAGCTGCTCAGGATATTGCTGG
GGCTGATCTCGCGCCGACGCATCCGATAAGGCTGGGATTGGCTCTCATTT
TCTCGGTGTTTTACT
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