DN621250

Overview
NameDN621250
Unique NameDN621250
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN621250_ssr184 microsatellite DN621250_ssr184:184..195. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13771 contig Csv1_Contig13771:22..598. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621250 vs. ExPASy Swiss-Prot
Match: VPE_CITSI (Vacuolar-processing enzyme OS=Citrus sinensis PE=2 SV=1)

HSP 1 Score: 377.481 bits (968), Expect = 2.597e-104
Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 1
Query:   31 MTRLASGVLITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPG 576
            MTRLASGVLITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVE FFAV+LGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPG
Sbjct:    1 MTRLASGVLITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVEKFFAVVLGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPG 182          
BLAST of DN621250 vs. ExPASy Swiss-Prot
Match: VPEG_ARATH (Vacuolar-processing enzyme gamma-isozyme OS=Arabidopsis thaliana GN=At4g32940 PE=2 SV=2)

HSP 1 Score: 270.011 bits (689), Expect = 5.840e-72
Identity = 132/184 (71.74%), Postives = 152/184 (82.61%), Query Frame = 1
Query:   28 TMTRLASGV-LITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPG 576
            TMTR++ GV L  LLV+L  ++  +R    D++KLPS+A RFF         NDDD + GTRWAVL+AGS+G+WNYRHQADICHAYQLLRKGGLK+ENI+VFMYDDIA N ENPRPG IIN PHG DVY+GVPKDYTG+DV V+N FAVILG+KTA+ GGSGKVVDSGPNDHIFIFYSDHGGPG
Sbjct:    4 TMTRVSVGVVLFVLLVSLVAVS-AARSGPDDVIKLPSQASRFFRPAE-----NDDDSNSGTRWAVLVAGSSGYWNYRHQADICHAYQLLRKGGLKEENIVVFMYDDIANNYENPRPGTIINSPHGKDVYQGVPKDYTGDDVNVDNLFAVILGDKTAVKGGSGKVVDSGPNDHIFIFYSDHGGPG 181          
BLAST of DN621250 vs. ExPASy Swiss-Prot
Match: VPE_VICSA (Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 3.204e-70
Identity = 121/181 (66.85%), Postives = 146/181 (80.66%), Query Frame = 1
Query:   34 TRLASGVLITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPG 576
            ++L++ +  T++V    +    RD+ GD L+LPSE  RFF       +  +DDD  GTRWA+LLAGSNG+WNYRHQ+D+CHAYQLLRKGG K+ENIIVFMYDDIA NEENPRPGVIIN P GDDVY GVPKDYTG +V  +NF+A +LGNK+ALTGGSGKVVDSGPNDHIF++Y+DHGGPG
Sbjct:    4 SQLSTLLFFTIVVTFLTVVSSGRDLPGDYLRLPSETSRFFR------EPKNDDDFEGTRWAILLAGSNGYWNYRHQSDVCHAYQLLRKGGSKEENIIVFMYDDIASNEENPRPGVIINKPDGDDVYAGVPKDYTGAEVHADNFYAALLGNKSALTGGSGKVVDSGPNDHIFVYYTDHGGPG 178          
BLAST of DN621250 vs. ExPASy Swiss-Prot
Match: VPE1_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 5.116e-68
Identity = 123/181 (67.96%), Postives = 142/181 (78.45%), Query Frame = 1
Query:   34 TRLASGVLITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPG 576
            T   + +L  LL+ L  +    RD+ GD L+LPS++       G G  V+      GTRWA+L AGS+G+WNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFN ENPR GVIIN P+GD+VYKGVPKDYTGEDVT  NF+A +LG+K+ LTGGSGKVV+SGPNDHIFIFYSDHGGPG
Sbjct:    4 TTATTSLLALLLLFLVALVSAGRDLVGDFLRLPSDS-------GNGDNVH------GTRWAILFAGSSGYWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNSENPRRGVIINSPNGDEVYKGVPKDYTGEDVTAHNFYAALLGDKSKLTGGSGKVVNSGPNDHIFIFYSDHGGPG 171          
BLAST of DN621250 vs. ExPASy Swiss-Prot
Match: VPEA_ARATH (Vacuolar-processing enzyme alpha-isozyme OS=Arabidopsis thaliana GN=At2g25940 PE=2 SV=2)

HSP 1 Score: 248.825 bits (634), Expect = 1.393e-65
Identity = 115/157 (73.25%), Postives = 136/157 (86.62%), Query Frame = 1
Query:  106 IAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPG 576
            ++GD++KLPS A +FF          +DDDS  T+WAVL+AGS+G+WNYRHQAD+CHAYQLL+KGG+K+ENI+VFMYDDIA NEENPRPGVIIN P+G+DVY GVPKDYTG++V V+N  AVILGNKTAL GGSGKVVDSGPNDHIFI+YSDHGGPG
Sbjct:   18 VSGDVIKLPSLASKFFR------PTENDDDS--TKWAVLVAGSSGYWNYRHQADVCHAYQLLKKGGVKEENIVVFMYDDIAKNEENPRPGVIINSPNGEDVYNGVPKDYTGDEVNVDNLLAVILGNKTALKGGSGKVVDSGPNDHIFIYYSDHGGPG 166          
BLAST of DN621250 vs. ExPASy Swiss-Prot
Match: VPE_RICCO (Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 5.128e-60
Identity = 105/131 (80.15%), Postives = 118/131 (90.08%), Query Frame = 1
Query:  184 DDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPG 576
            DDDD +GTRWAVL+AGS GF NYRHQAD+CHAYQLLRKGGLK+ENIIVFMYDDIA NE NPRPGVIINHP G+DVY GVPKDYTGE VT +N +AV+LG+K+A+ GGSGKVVDS PND IF++YSDHGGPG
Sbjct:   54 DDDDQLGTRWAVLVAGSMGFGNYRHQADVCHAYQLLRKGGLKEENIIVFMYDDIAKNELNPRPGVIINHPQGEDVYAGVPKDYTGEHVTAKNLYAVLLGDKSAVQGGSGKVVDSKPNDRIFLYYSDHGGPG 184          
BLAST of DN621250 vs. ExPASy Swiss-Prot
Match: LEGU_CANEN (Legumain OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 4.800e-58
Identity = 101/129 (78.29%), Postives = 114/129 (88.37%), Query Frame = 1
Query:  190 DDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPG 576
            DD VGTRWAVL+AGSNG+ NYRHQAD+CHAYQLL KGG+K+ENI+VFMYDDIA+N  NPRPGVIINHP G DVY GVPKDYTGEDVT EN +AVILG+K+ + GGSGKV++S P D IFIFYSDHGGPG
Sbjct:   34 DDEVGTRWAVLVAGSNGYGNYRHQADVCHAYQLLIKGGVKEENIVVFMYDDIAYNAMNPRPGVIINHPQGPDVYAGVPKDYTGEDVTPENLYAVILGDKSKVKGGSGKVINSNPEDRIFIFYSDHGGPG 162          
BLAST of DN621250 vs. ExPASy Swiss-Prot
Match: VPE_SOYBN (Vacuolar-processing enzyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.069e-57
Identity = 108/175 (61.71%), Postives = 131/175 (74.86%), Query Frame = 1
Query:   52 VLITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPG 576
            +++ L+      A  +R     ++KLP+E             V+ D D VGTRWAVL+AGSNG+ NYRHQAD+CHAYQLL KGGLK+ENI+VFMYDDIA NE NPR GVIINHP G+D+Y GVPKDYTG++VT EN FAVILG+K+ L GGSGKV++S P D IFI+YSDHGGPG
Sbjct:   20 MMVVLVRVHGAAARPNRKEWDSVIKLPTEP------------VDADSDEVGTRWAVLVAGSNGYGNYRHQADVCHAYQLLIKGGLKEENIVVFMYDDIATNELNPRHGVIINHPEGEDLYAGVPKDYTGDNVTTENLFAVILGDKSKLKGGSGKVINSKPEDRIFIYYSDHGGPG 182          
BLAST of DN621250 vs. ExPASy Swiss-Prot
Match: VPE2_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.001e-55
Identity = 102/174 (58.62%), Postives = 132/174 (75.86%), Query Frame = 1
Query:   55 LITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPG 576
            ++ +++ + G     +D    ++KLP++            +V+ + D VGTRWAVL+AGSNG+ NYRHQAD+CHAYQLL KGG+K+ENI+VFMYDDIA +E NPRPGVIIN+P G DVY GVPKDYTGE VT  NFFAV+LG+K+ + GGSGKV++S P D IF++YSDHGGPG
Sbjct:   22 MLVMVMRIQGTNGKEQD---SVIKLPTQ------------EVDAESDEVGTRWAVLVAGSNGYGNYRHQADVCHAYQLLIKGGVKEENIVVFMYDDIATHELNPRPGVIINNPQGPDVYAGVPKDYTGESVTSHNFFAVLLGDKSKVKGGSGKVINSKPEDRIFVYYSDHGGPG 180          
BLAST of DN621250 vs. ExPASy Swiss-Prot
Match: VPEB_ARATH (Vacuolar-processing enzyme beta-isozyme OS=Arabidopsis thaliana GN=At1g62710 PE=2 SV=3)

HSP 1 Score: 215.698 bits (548), Expect = 1.307e-55
Identity = 94/132 (71.21%), Postives = 114/132 (86.36%), Query Frame = 1
Query:  181 NDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPG 576
            + D+D VGTRWAVL+AGS+G+ NYRHQAD+CHAYQ+LRKGGLK+ENI+V MYDDIA +  NPRPG +INHP GDDVY GVPKDYTG  VT  NF+AV+LG++ A+ GGSGKV+ S PNDHIF++Y+DHGGPG
Sbjct:   42 DQDEDGVGTRWAVLVAGSSGYGNYRHQADVCHAYQILRKGGLKEENIVVLMYDDIANHPLNPRPGTLINHPDGDDVYAGVPKDYTGSSVTAANFYAVLLGDQKAVKGGSGKVIASKPNDHIFVYYADHGGPG 173          
The following BLAST results are available for this feature:
BLAST of DN621250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
VPE_CITSI2.597e-10498.90Vacuolar-processing enzyme OS=Citrus sinensis PE=2... [more]
VPEG_ARATH5.840e-7271.74Vacuolar-processing enzyme gamma-isozyme OS=Arabid... [more]
VPE_VICSA3.204e-7066.85Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV... [more]
VPE1_PHAVU5.116e-6867.96Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPEA_ARATH1.393e-6573.25Vacuolar-processing enzyme alpha-isozyme OS=Arabid... [more]
VPE_RICCO5.128e-6080.15Vacuolar-processing enzyme OS=Ricinus communis PE=... [more]
LEGU_CANEN4.800e-5878.29Legumain OS=Canavalia ensiformis PE=1 SV=1[more]
VPE_SOYBN1.069e-5761.71Vacuolar-processing enzyme OS=Glycine max PE=2 SV=... [more]
VPE2_PHAVU1.001e-5558.62Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPEB_ARATH1.307e-5571.21Vacuolar-processing enzyme beta-isozyme OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06H08_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621250 ID=DN621250; Name=DN621250; organism=Citrus sinensis; type=EST; length=577bp
CAGCAACCAATCAACCCCCTTCAAAAAACCATGACGCGCCTTGCCTCCGG
CGTGCTAATCACGCTCCTAGTCGCTCTTGCAGGAATCGCCGATGGAAGCA
GAGACATAGCAGGTGACATTCTGAAGCTACCATCGGAAGCCTATAGGTTC
TTCCATAATGGTGGGGGAGGGGCAAAGGTCAACGATGATGATGATTCTGT
CGGCACGAGATGGGCCGTCCTGCTTGCCGGATCTAATGGCTTCTGGAATT
ACAGGCATCAGGCTGATATTTGTCATGCTTATCAACTCTTGAGGAAAGGT
GGGCTGAAGGATGAAAATATTATTGTTTTCATGTATGATGACATCGCTTT
CAATGAAGAGAACCCAAGGCCTGGAGTCATCATTAACCACCCCCATGGCG
ATGATGTTTACAAAGGAGTTCCAAAGGATTACACGGGGGAAGATGTTACT
GTTGAAAACTTTTTTGCTGTTATCCTGGGAAATAAAACAGCTCTTACAGG
GGGCAGTGGGAAGGTTGTGGATAGCGGCCCCAATGATCATATTTTCATAT
TCTACTCAGATCATGGGGGCCCTGGGG
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