FC922057

Overview
NameFC922057
Unique NameFC922057
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length569
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC922057 vs. ExPASy Swiss-Prot
Match: H4_SILLA (Histone H4 OS=Silene latifolia GN=SlH4 PE=3 SV=3)

HSP 1 Score: 159.073 bits (401), Expect = 1.422e-38
Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 1 
Query:  130 RHRKVLRDNIQGITKPAIRRLARKGGVKHISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 375
            RHRKVLRDNIQGITKPAIRRLAR+GGVK ISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY
Sbjct:   18 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of FC922057 vs. ExPASy Swiss-Prot
Match: H4_PEA (Histone H4 OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 1.422e-38
Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 1 
Query:  130 RHRKVLRDNIQGITKPAIRRLARKGGVKHISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 375
            RHRKVLRDNIQGITKPAIRRLAR+GGVK ISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY
Sbjct:   18 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of FC922057 vs. ExPASy Swiss-Prot
Match: H4_MAIZE (Histone H4 OS=Zea mays GN=H4C7 PE=1 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 1.422e-38
Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 1 
Query:  130 RHRKVLRDNIQGITKPAIRRLARKGGVKHISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 375
            RHRKVLRDNIQGITKPAIRRLAR+GGVK ISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY
Sbjct:   18 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of FC922057 vs. ExPASy Swiss-Prot
Match: H4_LOLTE (Histone H4 OS=Lolium temulentum PE=3 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 1.422e-38
Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 1 
Query:  130 RHRKVLRDNIQGITKPAIRRLARKGGVKHISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 375
            RHRKVLRDNIQGITKPAIRRLAR+GGVK ISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY
Sbjct:   18 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of FC922057 vs. ExPASy Swiss-Prot
Match: H4_FLATR (Histone H4 OS=Flaveria trinervia GN=hh4 PE=3 SV=3)

HSP 1 Score: 159.073 bits (401), Expect = 1.422e-38
Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 1 
Query:  130 RHRKVLRDNIQGITKPAIRRLARKGGVKHISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 375
            RHRKVLRDNIQGITKPAIRRLAR+GGVK ISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY
Sbjct:   18 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of FC922057 vs. ExPASy Swiss-Prot
Match: H4_EUCGL (Histone H4 OS=Eucalyptus globulus PE=3 SV=3)

HSP 1 Score: 159.073 bits (401), Expect = 1.422e-38
Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 1 
Query:  130 RHRKVLRDNIQGITKPAIRRLARKGGVKHISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 375
            RHRKVLRDNIQGITKPAIRRLAR+GGVK ISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY
Sbjct:   18 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of FC922057 vs. ExPASy Swiss-Prot
Match: H4_CHEMJ (Histone H4 OS=Chelidonium majus PE=3 SV=3)

HSP 1 Score: 159.073 bits (401), Expect = 1.422e-38
Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 1 
Query:  130 RHRKVLRDNIQGITKPAIRRLARKGGVKHISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 375
            RHRKVLRDNIQGITKPAIRRLAR+GGVK ISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY
Sbjct:   18 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of FC922057 vs. ExPASy Swiss-Prot
Match: H4_ARATH (Histone H4 OS=Arabidopsis thaliana GN=At1g07660 PE=1 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 1.422e-38
Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 1 
Query:  130 RHRKVLRDNIQGITKPAIRRLARKGGVKHISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 375
            RHRKVLRDNIQGITKPAIRRLAR+GGVK ISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY
Sbjct:   18 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of FC922057 vs. ExPASy Swiss-Prot
Match: H42_WHEAT (Histone H4 variant TH091 OS=Triticum aestivum PE=3 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 1.422e-38
Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 1 
Query:  130 RHRKVLRDNIQGITKPAIRRLARKGGVKHISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 375
            RHRKVLRDNIQGITKPAIRRLAR+GGVK ISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY
Sbjct:   18 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of FC922057 vs. ExPASy Swiss-Prot
Match: H41_WHEAT (Histone H4 variant TH011 OS=Triticum aestivum PE=3 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 1.422e-38
Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 1 
Query:  130 RHRKVLRDNIQGITKPAIRRLARKGGVKHISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 375
            RHRKVLRDNIQGITKPAIRRLAR+GGVK ISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY
Sbjct:   18 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 99
The following BLAST results are available for this feature:
BLAST of FC922057 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
H4_SILLA1.422e-3897.56Histone H4 OS=Silene latifolia GN=SlH4 PE=3 SV=3[more]
H4_PEA1.422e-3897.56Histone H4 OS=Pisum sativum PE=1 SV=2[more]
H4_MAIZE1.422e-3897.56Histone H4 OS=Zea mays GN=H4C7 PE=1 SV=2[more]
H4_LOLTE1.422e-3897.56Histone H4 OS=Lolium temulentum PE=3 SV=2[more]
H4_FLATR1.422e-3897.56Histone H4 OS=Flaveria trinervia GN=hh4 PE=3 SV=3[more]
H4_EUCGL1.422e-3897.56Histone H4 OS=Eucalyptus globulus PE=3 SV=3[more]
H4_CHEMJ1.422e-3897.56Histone H4 OS=Chelidonium majus PE=3 SV=3[more]
H4_ARATH1.422e-3897.56Histone H4 OS=Arabidopsis thaliana GN=At1g07660 PE... [more]
H42_WHEAT1.422e-3897.56Histone H4 variant TH091 OS=Triticum aestivum PE=3... [more]
H41_WHEAT1.422e-3897.56Histone H4 variant TH011 OS=Triticum aestivum PE=3... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1DA09RM1 SLH Citrus sinensis cDNA clone KN0AAM1DA09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922057 ID=FC922057; Name=FC922057; organism=Citrus sinensis; type=EST; length=569bp
AATCAAGGCTCATTCAAATTTCTCTATCCAAATTCTCTTTCGAGGAACAG
CGGAAAGTCTTTTAAGTTCCTCGCTAAGATGTCTGGGCGCGGTAAGGGAG
GCAAGGGATTGGGAAAGGGAGGCGCCTAGCGTCACCGTAAGGTGCTTCGC
GATAACATTCAGGGTATCACAAAGCCGGCAATCCGGCGTTTGGCTCGTAA
AGGTGGAGTCAAGCATATCAGCGGCTTGATCTACGAGGAGACACGTGGCG
TCCTGAAGATATTCTTGGAGAACGTCATCCGTGACGCCGTGACCTACACT
GAGCACGCCAGGAGAAAGACCGTGACCGCGATGGACGTCGTTTACGCTCT
CAAGAGGCAGGGCAGGACTCTTTATGGATTTGGGGGTTAATTGTCTTAGG
GTTCTGGAATTAAATGTTAATAGATCTTGACTCTAGATCTTGATCTGGTA
GATGGGGCTCTTAATAGTTTGTTATTAGGTTGCTGCTTTGTAATTCTATC
AAGTTAAATCTTATCTTTATATTTGAGGCAATATAGAACTGTTTTCTTTG
AAAAAAAAAAAAAAAAAAA
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