DN621171

Overview
NameDN621171
Unique NameDN621171
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length592
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig661 contig Csv1_Contig661:20..611. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621171 vs. ExPASy Swiss-Prot
Match: SAR1A_ARATH (GTP-binding protein SAR1A OS=Arabidopsis thaliana GN=SAR1A PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 5.096e-58
Identity = 112/151 (74.17%), Postives = 119/151 (78.81%), Query Frame = 2
Query:  140 MFLLDWVYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNF 592
            MF++DW YGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVW                   ERFAESK+            +VPFL+LGNKIDIPYAASE+ELRYHLGLSNF
Sbjct:    1 MFMIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLASVPFLILGNKIDIPYAASEDELRYHLGLSNF 151          
BLAST of DN621171 vs. ExPASy Swiss-Prot
Match: SAR1B_ARATH (GTP-binding protein SAR1B OS=Arabidopsis thaliana GN=SAR1B PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 8.692e-58
Identity = 112/151 (74.17%), Postives = 117/151 (77.48%), Query Frame = 2
Query:  140 MFLLDWVYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNF 592
            MFL DW YG+LASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVW                   ERFAESKR             VPFL+LGNKIDIPYAASE+ELRYHLGL+NF
Sbjct:    1 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKRELDALLSDEALATVPFLILGNKIDIPYAASEDELRYHLGLTNF 151          
BLAST of DN621171 vs. ExPASy Swiss-Prot
Match: SAR1A_BRACM (GTP-binding protein SAR1A OS=Brassica campestris GN=SAR1A PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 8.692e-58
Identity = 112/151 (74.17%), Postives = 118/151 (78.15%), Query Frame = 2
Query:  140 MFLLDWVYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNF 592
            MF++DW YGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVW                   ERFAESK+             VPFL+LGNKIDIPYAASE+ELRYHLGLSNF
Sbjct:    1 MFVIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLATVPFLILGNKIDIPYAASEDELRYHLGLSNF 151          
BLAST of DN621171 vs. ExPASy Swiss-Prot
Match: SAR1B_BRACM (GTP-binding protein SAR1B OS=Brassica campestris GN=SAR1B PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 2.796e-56
Identity = 109/151 (72.19%), Postives = 116/151 (76.82%), Query Frame = 2
Query:  140 MFLLDWVYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNF 592
            MFL DW YG+LASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVW                   ERF+ESK+             VPFL+LGNKID PYAASE+ELRYHLGL+NF
Sbjct:    1 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFSESKKELDALLSDDALATVPFLILGNKIDNPYAASEDELRYHLGLTNF 151          
BLAST of DN621171 vs. ExPASy Swiss-Prot
Match: SAR2_SOLLC (GTP-binding protein SAR2 OS=Solanum lycopersicum GN=SAR2 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.063e-55
Identity = 108/149 (72.48%), Postives = 115/149 (77.18%), Query Frame = 2
Query:  140 MFLLDWVYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLS 586
            MFL+DW YGVLASLGLWQK+AKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIG IKFKAFDLGGHQIARRVW                   ERF E+K+            NVPFL+LGNKIDIPYAASE+ELRYHLGL+
Sbjct:    1 MFLVDWFYGVLASLGLWQKDAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGNIKFKAFDLGGHQIARRVWRDYYAKVDAVVYLVDANDRERFPEAKKELDGLLSDESLTNVPFLILGNKIDIPYAASEDELRYHLGLT 149          
BLAST of DN621171 vs. ExPASy Swiss-Prot
Match: SAR1_TOBAC (GTP-binding protein SAR1 OS=Nicotiana tabacum GN=SAR1 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 6.048e-43
Identity = 94/151 (62.25%), Postives = 102/151 (67.55%), Query Frame = 2
Query:  140 MFLLDWVYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRXXXXXXXXXXXXNVPFLVLGN---KIDIPYAASEE-ELRYHLG 580
            MFL+DW YG+LA+LGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVW                   ERFAESK+               FL L N   +I+ P     +   RYH+G
Sbjct:    1 MFLVDWFYGILATLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDSFDKERFAESKKELDALLSGWSSLAHCFLFLDNWVTRIEHPICCLRKMNWRYHMG 151          
BLAST of DN621171 vs. ExPASy Swiss-Prot
Match: SAR1_PICST (Small COPII coat GTPase SAR1 OS=Pichia stipitis GN=SAR1 PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.106e-39
Identity = 83/150 (55.33%), Postives = 97/150 (64.67%), Query Frame = 2
Query:  140 MFLLDWVYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSN 589
            M+L DW   VL+SLGLW K AK+LFLGLDNAGKTTLLHMLK++RL   QPT +PTSEEL+IG ++F  FDLGGHQ ARR+W                   ERFAESK             +VPFL+LGNKID+P A  E EL+  LGL N
Sbjct:    1 MWLFDWFQDVLSSLGLWNKHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADPERFAESKAELESLFKIEELSHVPFLILGNKIDVPTAVGEMELKSALGLYN 150          
BLAST of DN621171 vs. ExPASy Swiss-Prot
Match: SAR1_LODEL (Small COPII coat GTPase SAR1 OS=Lodderomyces elongisporus GN=SAR1 PE=3 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 9.037e-39
Identity = 81/150 (54.00%), Postives = 96/150 (64.00%), Query Frame = 2
Query:  140 MFLLDWVYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSN 589
            M++ DW   +LASLGLW K AK+LFLGLDNAGKTTLLHMLK++RL   QPT +PTSEEL+IG ++F  FDLGGHQ ARR+W                   ERFAESK              VPF++LGNKID+P A  E EL+  LGL N
Sbjct:    1 MWIFDWFQDILASLGLWNKHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADSERFAESKAELESLFKIEELSQVPFVILGNKIDVPTAVGEMELKNALGLYN 150          
BLAST of DN621171 vs. ExPASy Swiss-Prot
Match: SAR1_CANAL (Small COPII coat GTPase SAR1 OS=Candida albicans GN=SAR1 PE=3 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 2.013e-38
Identity = 80/150 (53.33%), Postives = 96/150 (64.00%), Query Frame = 2
Query:  140 MFLLDWVYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSN 589
            M++ DW   +L+SLGLW K AK+LFLGLDNAGKTTLLHMLK++RL   QPT +PTSEEL+IG ++F  FDLGGHQ ARR+W                   ERFAESK              VPF++LGNKID+P A  E EL+  LGL N
Sbjct:    1 MWIFDWFQDILSSLGLWNKHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADTERFAESKAELESLFRIEELSQVPFVILGNKIDVPTAVGEMELKNALGLYN 150          
BLAST of DN621171 vs. ExPASy Swiss-Prot
Match: SAR1_DEBHA (Small COPII coat GTPase SAR1 OS=Debaryomyces hansenii GN=SAR1 PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.434e-38
Identity = 83/150 (55.33%), Postives = 95/150 (63.33%), Query Frame = 2
Query:  140 MFLLDWVYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSN 589
            M+L DW   VLASLGLW K AK+LFLGLDNAGKTTLLHMLK++RL   QPT +PTSEEL+IG ++F  FDLGGHQ ARR+W                   ERFAESK             +VPFL+LGNKID   A  E EL+  LGL N
Sbjct:    1 MWLFDWFQDVLASLGLWNKHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADPERFAESKAELESLFKIEELASVPFLILGNKIDASSAVGEMELKSALGLYN 150          
The following BLAST results are available for this feature:
BLAST of DN621171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
SAR1A_ARATH5.096e-5874.17GTP-binding protein SAR1A OS=Arabidopsis thaliana ... [more]
SAR1B_ARATH8.692e-5874.17GTP-binding protein SAR1B OS=Arabidopsis thaliana ... [more]
SAR1A_BRACM8.692e-5874.17GTP-binding protein SAR1A OS=Brassica campestris G... [more]
SAR1B_BRACM2.796e-5672.19GTP-binding protein SAR1B OS=Brassica campestris G... [more]
SAR2_SOLLC1.063e-5572.48GTP-binding protein SAR2 OS=Solanum lycopersicum G... [more]
SAR1_TOBAC6.048e-4362.25GTP-binding protein SAR1 OS=Nicotiana tabacum GN=S... [more]
SAR1_PICST3.106e-3955.33Small COPII coat GTPase SAR1 OS=Pichia stipitis GN... [more]
SAR1_LODEL9.037e-3954.00Small COPII coat GTPase SAR1 OS=Lodderomyces elong... [more]
SAR1_CANAL2.013e-3853.33Small COPII coat GTPase SAR1 OS=Candida albicans G... [more]
SAR1_DEBHA3.434e-3855.33Small COPII coat GTPase SAR1 OS=Debaryomyces hanse... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06F14_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006F14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621171 ID=DN621171; Name=DN621171; organism=Citrus sinensis; type=EST; length=592bp
CTGAACTTGCTCATCTTAGGGTCAGTATCAAATCGAAACAGAGGCCTTGA
ATTGGACGATCTGATTCGTTCTCAGCCTTAGATCGTCGTAAATTCAAGCT
CGATCCGTTTTCGTTTCTAATTTGTCTACCGATAAAGCCATGTTTCTCCT
CGACTGGGTCTACGGCGTGCTGGCCTCCCTCGGTCTTTGGCAGAAAGAGG
CCAAGATCTTGTTTTTAGGGCTTGATAATGCTGGAAAAACAACGTTGCTT
CACATGTTGAAAGATGAGAGATTGGTTCAACATCAGCCAACACAGTATCC
CACATCGGAAGAGCTTAGTATTGGGAAAATTAAGTTCAAGGCGTTTGATT
TGGGAGGCCATCAGATTGCTAGGAGAGTCTGGAAGGATTACTATGCGAAG
GTTGATGCTGTGGTATACCTAGTGGATGCCTATGACAAAGAGAGGTTTGC
AGAATCAAAGAGAGAACTGGATGCACTCCTTTCTGATGAGGCATTGGCCA
ATGTTCCTTTTCTTGTGTTAGGAAACAAGATTGACATCCCTTATGCTGCT
TCTGAGGAAGAGTTGCGTTACCACCTTGGCCTATCAAATTTC
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