DN621169

Overview
NameDN621169
Unique NameDN621169
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length710
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621169 vs. ExPASy Swiss-Prot
Match: NAC9_ARATH (Putative NAC domain-containing protein 9 OS=Arabidopsis thaliana GN=NAC009 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.190e-17
Identity = 38/61 (62.30%), Postives = 48/61 (78.69%), Query Frame = 1
Query:  475 DERNENDKLDEIMLPPGFRFYPTDEELLGFYLRRKIQQRPLAIEPIEQIGMYKYDPWDLPK 657
            D  N+ D+  E +L PGFRF+PTDEEL+ FYL+RK+Q  PL+IE I Q+ +YKYDPWDLPK
Sbjct:    3 DRNNDGDQKMEDVLLPGFRFHPTDEELVSFYLKRKVQHNPLSIELIRQLDIYKYDPWDLPK 63          
BLAST of DN621169 vs. ExPASy Swiss-Prot
Match: NAC42_ARATH (NAC domain-containing protein 42 OS=Arabidopsis thaliana GN=NAC042 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.567e-15
Identity = 35/60 (58.33%), Postives = 45/60 (75.00%), Query Frame = 1
Query:  520 PGFRFYPTDEELLGFYLRRKIQQRPLAIEPIEQIGMYKYDPWDLPKCDQSLTGSVGHSTW 699
            PGFRF+PTDEELLG+YLRRK++ + + +E I+QI +YKYDPWDLP+       SVG   W
Sbjct:   20 PGFRFHPTDEELLGYYLRRKVENKTIKLELIKQIDIYKYDPWDLPR-----VSSVGEKEW 74          
BLAST of DN621169 vs. ExPASy Swiss-Prot
Match: NAC94_ARATH (Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana GN=ANAC094 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.755e-14
Identity = 35/78 (44.87%), Postives = 53/78 (67.95%), Query Frame = 1
Query:  475 DERNENDKLDEIMLPPGFRFYPTDEELLGFYLRRKIQQRPLAIEPIEQIGMYKYDPWDLPKCDQSLTGSVGHSTWETY 708
            +E N  ++ D+++LP GFRF+PTDEEL+ FYL+RK+  + L  + I+++ +YKYDPWDLPK       ++G   W  Y
Sbjct:    8 EESNNVERYDDVVLP-GFRFHPTDEELVSFYLKRKVLHKSLPFDLIKKVDIYKYDPWDLPK-----LAAMGEKEWYFY 79          
BLAST of DN621169 vs. ExPASy Swiss-Prot
Match: NAC72_ARATH (NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.996e-12
Identity = 32/56 (57.14%), Postives = 40/56 (71.43%), Query Frame = 1
Query:  487 ENDKLDEIMLPPGFRFYPTDEELLGFYLRRKIQQRPLAIEPIEQIGMYKYDPWDLP 654
            E D L ++ LPPGFRFYPTDEELL  YL RK+     +++ I  I +YK+DPWDLP
Sbjct:    5 EKDPLAQLSLPPGFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDIDLYKFDPWDLP 60          
BLAST of DN621169 vs. ExPASy Swiss-Prot
Match: NAC68_ORYSJ (NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.336e-11
Identity = 29/51 (56.86%), Postives = 40/51 (78.43%), Query Frame = 1
Query:  505 EIMLPPGFRFYPTDEELLGFYLRRKIQQRPLAIEPIEQIGMYKYDPWDLPK 657
            E+ LPPGFRF+PTDEEL+  YL RK+ ++PL +  I ++ +YK DPWDLP+
Sbjct:   18 ELNLPPGFRFHPTDEELVVHYLCRKVARQPLPVPIIAEVDLYKLDPWDLPE 68          
The following BLAST results are available for this feature:
BLAST of DN621169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
NAC9_ARATH6.190e-1762.30Putative NAC domain-containing protein 9 OS=Arabid... [more]
NAC42_ARATH7.567e-1558.33NAC domain-containing protein 42 OS=Arabidopsis th... [more]
NAC94_ARATH3.755e-1444.87Putative NAC domain-containing protein 94 OS=Arabi... [more]
NAC72_ARATH5.996e-1257.14NAC domain-containing protein 72 OS=Arabidopsis th... [more]
NAC68_ORYSJ1.336e-1156.86NAC domain-containing protein 68 OS=Oryza sativa s... [more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_06F13_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006F13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621169 ID=DN621169; Name=DN621169; organism=Citrus sinensis; type=EST; length=710bp
CACTTCACCATTACAGATTTCTCATCAACACTTTCTGTTTCTGTGAAGAA
CTTTACTCAAGCAAGATCTATTTGTCCGGCTTCTTATGTACGCTTATGAT
CAGTAGGTAATTAACTAGTTTATTTACTGAGTTTTATACTACCTATCCCA
GTTTATGGTTGTCATTTTTAGTGGTACATGCATATTGACTTATTTGAAAA
AATGGATTTGATCTAAAAGCTTTCATTTTAACTCAATTTGACAAGTTATA
TCCTGACAAATTAGTCTGATGATGATCTTTGTGATTTTAGGATTTCTGGT
ATTTTATAAGCTTTTACTTTCTTGGTAGTTGTTGCTTTCCTTTGCCTCAA
GCTTCTGATTGAGCCAACGCATTGTTCCACGCTAAACAAGCACTTCTTCA
AAAGTCACCAGAAAAAGGCGGCTGATTATTCAGAGGCAGGACCCTCGTGC
TACTAGGATTTGCTACAAAGAATGGATGAGAGAAATGAAAATGATAAGCT
GGATGAAATCATGCTACCACCAGGGTTTAGGTTTTATCCAACTGATGAGG
AGCTTCTAGGGTTTTATTTAAGGAGGAAGATTCAACAAAGGCCTCTCGCT
ATTGAGCCCATCGAGCAAATTGGCATGTACAAATATGATCCGTGGGATCT
GCCAAAATGTGATCAATCACTGACAGGGTCTGTGGGCCACTCAACATGGG
AAACTTACAA
back to top