DN621165

Overview
NameDN621165
Unique NameDN621165
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length728
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN621165_ssr247 microsatellite DN621165_ssr247:247..258. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig12427 contig Csv1_Contig12427:11..738. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of DN621165 vs. ExPASy Swiss-Prot
Match: ANTA_GENTR (Anthocyanin 5-aromatic acyltransferase OS=Gentiana triflora PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.442e-18
Identity = 59/209 (28.23%), Postives = 99/209 (47.37%), Query Frame = 2 
Query:  119 TLPLTYFDTLWLKFPPSERLFFYQITDLTIDLFNSVIIPKXXXXXXXXXXXXXXXAGHIMWPADSAK-PAIYYFPDQNDGVSFTVAESDADFSHLTGNN--GNREAVEFHHLTPQL--SISDDKA-EVVAIQITLFPKQGFCISVLTHHAVIDGISKTMFERSWAYFCKXXXXXXXXXXXXXXXXXPTELIPCFDRTLIKDPEGLDVVY 727
            +LP+T+FD  WL     + L FY          ++VI P                +G+++ P  S + P   Y  D+ D ++  VAESD DF +L G+    + +     ++ P++  ++ D K   +VA+Q+T+FP +G  +++  HH++ D  S  MF  +WAY  K                    L+P FDR++IKD  GL+  +
Sbjct:   27 SLPVTFFDIPWLHLNKMQSLLFYDFPYPRTHFLDTVI-PNLKASLSLTLKHYVPLSGNLLMPIKSGEMPKFQYSRDEGDSITLIVAESDQDFDYLKGHQLVDSNDLHGLFYVMPRVIRTMQDYKVIPLVAVQVTVFPNRGIAVALTAHHSIADAKSFVMFINAWAYINK---------FGKDADLLSANLLPSFDRSIIKDLYGLEETF 225
The following BLAST results are available for this feature:
BLAST of DN621165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ANTA_GENTR4.442e-1828.23Anthocyanin 5-aromatic acyltransferase OS=Gentiana... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_06F11_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621165 ID=DN621165; Name=DN621165; organism=Citrus sinensis; type=EST; length=728bp
ATTGTTTCTTAATATTTTTACTCTCTCCCTCACGATCGTCATGGCAGAAA
AACATAAAGTGAAAATACATTCAGTTAGCAAAATCAGCCCGCCGTCGTCC
GACTCAGTCACCGCCTCCACTCTTCCACTCACCTACTTCGATACTCTGTG
GCTAAAATTTCCACCTTCAGAACGCCTCTTTTTCTATCAAATCACTGACC
TAACTATCGATTTATTCAACTCAGTGATCATCCCGAAGCTCGCTGACTCT
CTCTCTCTCACTCTCCTTCATTATCTCCCCCTCGCCGGTCACATAATGTG
GCCTGCGGACTCCGCGAAGCCAGCCATTTACTACTTCCCTGACCAAAACG
ACGGCGTCTCATTCACCGTTGCTGAATCCGACGCTGACTTCAGCCACCTC
ACTGGCAATAACGGAAACCGCGAAGCCGTTGAATTTCATCATCTGACGCC
CCAGTTGTCCATATCCGACGATAAAGCTGAGGTGGTTGCTATACAAATAA
CTCTGTTTCCGAAACAAGGGTTTTGCATCTCCGTCTTGACTCACCACGCT
GTCATCGACGGGATAAGCAAAACAATGTTTGAGAGATCTTGGGCTTATTT
CTGCAAACAACTAATTCAGATGCAACAACAAAACCTTAATAATTCTTCGA
TATTATTACCCACCGAGCTAATCCCGTGCTTTGACCGGACTCTCATCAAA
GATCCGGAAGGGCTGGACGTTGTTTATG
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