DN621157
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN621157 vs. ExPASy Swiss-Prot
Match: UPL3_ARATH (E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana GN=UPL3 PE=1 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.308e-42 Identity = 84/94 (89.36%), Postives = 90/94 (95.74%), Query Frame = -3 Query: 437 QQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 718 QQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSST+ + A+NG G SE+ADDDLPSVMTCANYLKLPPYSTKEIMYKKL+YAI+EGQGSFDLS Sbjct: 1796 QQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTS-SAAANGAGASETADDDLPSVMTCANYLKLPPYSTKEIMYKKLLYAINEGQGSFDLS 1888
BLAST of DN621157 vs. ExPASy Swiss-Prot
Match: UPL4_ARATH (E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana GN=UPL4 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.624e-28 Identity = 65/94 (69.15%), Postives = 73/94 (77.66%), Query Frame = -3 Query: 437 QQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 718 QQRAF QFVTG+PRLP GGLA L+PKLTIVRKH S +S+D DLPSVMTCANYLKLPPYS+KE M +KL+YAI+EGQGSF LS Sbjct: 1422 QQRAFLQFVTGSPRLPHGGLASLSPKLTIVRKHGS-------------DSSDTDLPSVMTCANYLKLPPYSSKEKMKEKLIYAITEGQGSFHLS 1502
BLAST of DN621157 vs. ExPASy Swiss-Prot
Match: TRIPC_HUMAN (Probable E3 ubiquitin-protein ligase TRIP12 OS=Homo sapiens GN=TRIP12 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.635e-20 Identity = 55/94 (58.51%), Postives = 62/94 (65.96%), Query Frame = -3 Query: 437 QQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 718 QQR F QFVTG+PRLP GG LNP LTIVRK + +E+ DD LPSVMTC NYLKLP YS+ EIM +KL+ A EGQ SF LS Sbjct: 1910 QQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFES-----------TENPDDFLPSVMTCVNYLKLPDYSSIEIMREKLLIAAREGQQSFHLS 1992
BLAST of DN621157 vs. ExPASy Swiss-Prot
Match: UFD4_YEAST (Ubiquitin fusion degradation protein 4 OS=Saccharomyces cerevisiae GN=UFD4 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.491e-18 Identity = 50/94 (53.19%), Postives = 64/94 (68.09%), Query Frame = -3 Query: 437 QQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 718 ++R F QF+TG+P+LP GG LNPK T+V KH A +G +AD+ LPSVMTCANYLKLP Y++K+IM +L AI EG G+F LS Sbjct: 1401 ERRLFLQFLTGSPKLPIGGFKSLNPKFTVVLKH-------AEDGL----TADEYLPSVMTCANYLKLPKYTSKDIMRSRLCQAIEEGAGAFLLS 1483
BLAST of DN621157 vs. ExPASy Swiss-Prot
Match: YDE1_SCHPO (Probable ubiquitin fusion degradation protein C12B10.01c OS=Schizosaccharomyces pombe GN=SPAC12B10.01c PE=2 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 9.665e-18 Identity = 49/94 (52.13%), Postives = 60/94 (63.83%), Query Frame = -3 Query: 437 QQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 718 +QR F QF+TG+ +LP GG A LNP LT+VR+ + P DD LPSVMTC NYLKLP YS+ E++ +L AI EGQGSF LS Sbjct: 1565 EQRDFLQFITGSRKLPIGGFAGLNPPLTVVRRLNE-----------PPYVPDDYLPSVMTCVNYLKLPEYSSSEVLGSRLSKAILEGQGSFHLS 1647
BLAST of DN621157 vs. ExPASy Swiss-Prot
Match: HECD1_HUMAN (E3 ubiquitin-protein ligase HECTD1 OS=Homo sapiens GN=HECTD1 PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 7.167e-13 Identity = 40/86 (46.51%), Postives = 53/86 (61.63%), Query Frame = -3 Query: 461 QQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISE 718 +++AF QF TG LPPGGLA L+P+LT+VRK +T D PSV TC +YLKLP YS++EIM ++L+ A E Sbjct: 2536 ERKAFLQFTTGCSTLPPGGLANLHPRLTVVRKVDAT---------------DASYPSVNTCVHYLKLPEYSSEEIMRERLLAATME 2606 The following BLAST results are available for this feature:
BLAST of DN621157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN621157 ID=DN621157; Name=DN621157; organism=Citrus sinensis; type=EST; length=720bpback to top |