DN621146

Overview
NameDN621146
Unique NameDN621146
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10893 contig Csv1_Contig10893:212..929. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621146 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.665e-70
Identity = 124/127 (97.64%), Postives = 126/127 (99.21%), Query Frame = -3
Query:  336 SAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYAMG 716
            SAGPVAEDMFHWQATIMGP DSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTD+AKYE+TARSWTQKYAMG
Sbjct:   22 SAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 148          
BLAST of DN621146 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 4.845e-70
Identity = 122/127 (96.06%), Postives = 126/127 (99.21%), Query Frame = -3
Query:  336 SAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYAMG 716
            SAGPVAEDMFHWQATIMGP DSPY+GGVFLV+IHFPPDYPFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTD+AKYESTARSWTQKYAMG
Sbjct:   22 SAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG 148          
BLAST of DN621146 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2)

HSP 1 Score: 263.848 bits (673), Expect = 6.327e-70
Identity = 121/127 (95.28%), Postives = 127/127 (100.00%), Query Frame = -3
Query:  336 SAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYAMG 716
            SAGPVAEDMFHWQATIMGPP+SPYAGGVFLVSIHFPPDYPFKPPKV+F+TKV+HPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTD++KYESTARSWTQKYAMG
Sbjct:   22 SAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYESTARSWTQKYAMG 148          
BLAST of DN621146 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 1.079e-69
Identity = 123/127 (96.85%), Postives = 125/127 (98.43%), Query Frame = -3
Query:  336 SAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYAMG 716
            SAGPVAEDMFHWQATIMGP +SPYAGGVFLV+IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDK KYESTARSWTQKYAMG
Sbjct:   22 SAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARSWTQKYAMG 148          
BLAST of DN621146 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.841e-69
Identity = 122/127 (96.06%), Postives = 125/127 (98.43%), Query Frame = -3
Query:  336 SAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYAMG 716
            SAGPVAEDMFHWQATIMGP DSPY+GGVFLV+IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDK KYESTAR+WTQKYAMG
Sbjct:   22 SAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARTWTQKYAMG 148          
BLAST of DN621146 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 5.356e-69
Identity = 120/127 (94.49%), Postives = 126/127 (99.21%), Query Frame = -3
Query:  336 SAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYAMG 716
            SAGPVAEDMFHWQATIMGP +SPY+GGVFLV+IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTD+AKYE+TAR+WTQKYAMG
Sbjct:   22 SAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARNWTQKYAMG 148          
BLAST of DN621146 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 5.543e-66
Identity = 114/127 (89.76%), Postives = 122/127 (96.06%), Query Frame = -3
Query:  336 SAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYAMG 716
            SAGP  +DMF WQATIMGP DSP+AGGVFLV+IHFPPDYPFKPPKVAFRTKV+HPNINSNGSICLDILKEQWSPALT+SKVLLSICSLLTDPNPDDPLVPEIAH+YKTD+ KYESTA+SWTQKYAMG
Sbjct:   22 SAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYKTDRVKYESTAQSWTQKYAMG 148          
BLAST of DN621146 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 8.004e-65
Identity = 112/126 (88.89%), Postives = 120/126 (95.24%), Query Frame = -3
Query:  339 SAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYAM 716
            SAGP  EDMFHWQATIMGP +SPY+GGVFLV+IHFPPDYPFKPPKV FRTKVFHPNINSNG+ICLDILK+QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAH+YKTDK KYE+ ARSWTQKYA+
Sbjct:   22 SAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHIYKTDKTKYEAMARSWTQKYAL 147          
BLAST of DN621146 vs. ExPASy Swiss-Prot
Match: UBC1_MAGGR (Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnaporthe grisea GN=UBC1 PE=3 SV=2)

HSP 1 Score: 233.802 bits (595), Expect = 7.012e-61
Identity = 104/126 (82.54%), Postives = 118/126 (93.65%), Query Frame = -3
Query:  339 SAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYAM 716
            SAGPV ED+FHWQATIMGP DSPYAGGVF ++IHFP DYPFKPPKV F T+++HPNINSNGSICLDIL++QWSPALTISKVLLSICS+LTDPNPDDPLVPEIAH+YKT +A+YESTAR WT+KYA+
Sbjct:   22 SAGPVGEDLFHWQATIMGPSDSPYAGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDDPLVPEIAHVYKTARAQYESTAREWTRKYAI 147          
BLAST of DN621146 vs. ExPASy Swiss-Prot
Match: UBC4_SCHPO (Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe GN=ubc4 PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.196e-60
Identity = 103/126 (81.75%), Postives = 118/126 (93.65%), Query Frame = -3
Query:  339 SAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYAM 716
            SAGPV +D+FHWQATIMGP DSPYAGGVF +SIHFP DYPFKPPKV F T+++HPNINSNGSICLDIL++QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAH+YKTD+++YE +AR WT+KYA+
Sbjct:   22 SAGPVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHVYKTDRSRYELSAREWTRKYAI 147          
The following BLAST results are available for this feature:
BLAST of DN621146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
UBC4_SOLLC1.665e-7097.64Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum ... [more]
UBC28_ARATH4.845e-7096.06Ubiquitin carrier protein E2 28 OS=Arabidopsis tha... [more]
UBC11_ARATH6.327e-7095.28Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis ... [more]
UBC10_ARATH1.079e-6996.85Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis ... [more]
UBC9_ARATH1.841e-6996.06SUMO-conjugating enzyme UBC9 OS=Arabidopsis thalia... [more]
UBC8_ARATH5.356e-6994.49Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis t... [more]
UBC30_ARATH5.543e-6689.76Ubiquitin carrier protein E2 30 OS=Arabidopsis tha... [more]
UBC29_ARATH8.004e-6588.89Ubiquitin carrier protein E2 29 OS=Arabidopsis tha... [more]
UBC1_MAGGR7.012e-6182.54Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnapor... [more]
UBC4_SCHPO1.196e-6081.75Ubiquitin-conjugating enzyme E2 4 OS=Schizosacchar... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06F01_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621146 ID=DN621146; Name=DN621146; organism=Citrus sinensis; type=EST; length=718bp
TTTTTTTTTAAACACGGATAAAATTGCAATCTCATAAGCAGCTTAAAGCT
AGAGCAAACAGTAATTTAAACAGAACTGTTTGAGATACATGGTAAACAAA
TGCGTGCACCCAAGAACATTAAGTCATAAACCACTGATCTTACAAGATCA
ATGTCAACACAAGCAAGCTACAATACAACATCAATCTTGTTTTGATGGAA
GACAGTGCATGAACACCATCTTCAATTATCATTTCCAAAAGGCAAAAACA
AAGACGGAAGACGAGCATATCACACTTCATTTTATACATAAATATTATGT
GATGAAAGACTATGTCCTAGATGATTTCATACTTAGCCCATGGCATACTT
TTGGGTCCAGCTCCTAGCAGTTGATTCATACTTAGCCTTGTCTGTCTTGT
ACATGTGAGCTATTTCTGGCACCAAAGGGTCATCTGGGTTTGGGTCCGTC
AACAATGAACAAATTGAGAGCAATACCTTAGATATAGTGAGGGCAGGACT
CCACTGCTCTTTTAGTATGTCGAGACATATACTGCCATTGCTGTTAATAT
TTGGGTGAAAAACCTTGGTCCTAAACGCGACCTTAGGTGGTTTGAATGGA
TAATCAGGAGGGAAATGGATTGAAACTAGAAATACACCTCCTGCATAAGG
ACTATCTGGGGGGCCCATTATGGTTGCTTGCCAATGAAACATGTCTTCAG
CCACAGGACCAGCACTGC
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