DN621135

Overview
NameDN621135
Unique NameDN621135
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length603
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN621135_ssr91 microsatellite DN621135_ssr91:91..102. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig6287 contig Csv1_Contig6287:1274..1876. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621135 vs. ExPASy Swiss-Prot
Match: ASPR_CUCPE (Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 9.330e-47
Identity = 83/116 (71.55%), Postives = 100/116 (86.21%), Query Frame = -2
Query:  255 MTVVWVQNQLKQKQTKEKVLSYINELWDSLPNSMGESIIDCGRIPTMPNVSFTIGDKIFNLFPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDFGKLRI 602
            MTVVW+QNQL+Q QTKE++++YINEL D +P+ MG+S +DCG++ +MP VSFTIG KIF+L PE+YILK GEG    CISGF AFD+PPPRGPLWILGDVFMG YHTVFDFGKLR+
Sbjct:  392 MTVVWMQNQLRQNQTKERIINYINELCDRMPSPMGQSAVDCGQLSSMPTVSFTIGGKIFDLAPEEYILKVGEGPVAQCISGFTAFDIPPPRGPLWILGDVFMGRYHTVFDFGKLRV 507          
BLAST of DN621135 vs. ExPASy Swiss-Prot
Match: ASPR1_ORYSJ (Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 1.068e-42
Identity = 77/116 (66.38%), Postives = 94/116 (81.03%), Query Frame = -2
Query:  255 MTVVWVQNQLKQKQTKEKVLSYINELWDSLPNSMGESIIDCGRIPTMPNVSFTIGDKIFNLFPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDFGKLRI 602
            M VVW+QNQL Q +T++ +L+YIN+L D LP+ MGES +DCG + +MP +SFTIG K F L PE+YILK GEG A  CISGF A D+PPPRGPLWILGDVFMG YHTVFD+GK+R+
Sbjct:  388 MAVVWMQNQLAQNKTQDLILNYINQLCDKLPSPMGESSVDCGSLASMPEISFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGAYHTVFDYGKMRV 503          
BLAST of DN621135 vs. ExPASy Swiss-Prot
Match: ASPR_HORVU (Phytepsin OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.542e-41
Identity = 76/116 (65.52%), Postives = 93/116 (80.17%), Query Frame = -2
Query:  255 MTVVWVQNQLKQKQTKEKVLSYINELWDSLPNSMGESIIDCGRIPTMPNVSFTIGDKIFNLFPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDFGKLRI 602
            M VVW+QNQL Q +T++ +L Y+N+L + LP+ MGES +DCG + +MP++ FTIG K F L PE+YILK GEG A  CISGF A D+PPPRGPLWILGDVFMG YHTVFD+GKLRI
Sbjct:  387 MAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLGSMPDIEFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRI 502          
BLAST of DN621135 vs. ExPASy Swiss-Prot
Match: CYPR1_CYNCA (Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO1 PE=1 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 8.459e-40
Identity = 68/114 (59.65%), Postives = 91/114 (79.82%), Query Frame = -2
Query:  255 VVWVQNQLKQKQTKEKVLSYINELWDSLPNSMGESIIDCGRIPTMPNVSFTIGDKIFNLFPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDFGKLRI 596
            VVW+QNQ++Q +T+E +++Y+++L + LP+ MGES +DC  + +MPN++FT+G K FNL PEQY+LK GEG    CISGF A D+ PP GPLWILGDVFMG YHTVFD+G LR+
Sbjct:  354 VVWMQNQIRQNETEENIINYVDKLCERLPSPMGESAVDCSSLSSMPNIAFTVGGKTFNLSPEQYVLKVGEGATAQCISGFTAMDVAPPHGPLWILGDVFMGQYHTVFDYGNLRV 467          
BLAST of DN621135 vs. ExPASy Swiss-Prot
Match: ASPRX_ORYSJ (Aspartic proteinase OS=Oryza sativa subsp. japonica GN=RAP PE=2 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 1.443e-39
Identity = 74/116 (63.79%), Postives = 92/116 (79.31%), Query Frame = -2
Query:  255 MTVVWVQNQLKQKQTKEKVLSYINELWDSLPNSMGESIIDCGRIPTMPNVSFTIGDKIFNLFPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDFGKLRI 602
            M VVW++NQL++ +TKE +L+Y N+L + LP+  GES + C +I  MPN++FTI +K F L PEQYI+K  +G   VCISGFMAFD+PPPRGPLWILGDVFMG YHTVFDFGK RI
Sbjct:  375 MAVVWIENQLRENKTKELILNYANQLCERLPSPNGESTVSCHQISKMPNLAFTIANKTFILTPEQYIVKLEQGGQTVCISGFMAFDIPPPRGPLWILGDVFMGAYHTVFDFGKDRI 490          
BLAST of DN621135 vs. ExPASy Swiss-Prot
Match: CATD_CLUHA (Cathepsin D OS=Clupea harengus GN=ctsd PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.603e-22
Identity = 43/82 (52.44%), Postives = 61/82 (74.39%), Query Frame = -2
Query:  273 SLPNSMGESIIDCGRIPTMPNVSFTIGDKIFNLFPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFD 518
            ++P   GE +IDC ++PT+P +SF +G K ++L  EQY+LK  +G   +C+SG M  ++PPP GPLWILGDVF+G Y+TVFD
Sbjct:  303 AIPLIQGEYMIDCKKVPTLPTISFNVGGKTYSLTGEQYVLKESQGGKTICLSGLMGLEIPPPAGPLWILGDVFIGQYYTVFD 384          
BLAST of DN621135 vs. ExPASy Swiss-Prot
Match: ASPP_AEDAE (Lysosomal aspartic protease OS=Aedes aegypti GN=AAEL006169 PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 6.733e-21
Identity = 44/94 (46.81%), Postives = 60/94 (63.83%), Query Frame = -2
Query:  255 INELWDSLPNSMGESIIDCGRIPTMPNVSFTIGDKIFNLFPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDFGKLRI 536
            IN+     P   GE ++DC  IP +P +SF +G K F+L    Y+L+  +    +C+SGFM  D+PPP GPLWILGDVF+G Y+T FD G  R+
Sbjct:  288 INKAIGGTPIMNGEYMVDCSLIPKLPKISFVLGGKSFDLEGADYVLRVAQMGKTICLSGFMGIDIPPPNGPLWILGDVFIGKYYTEFDMGNDRV 381          
BLAST of DN621135 vs. ExPASy Swiss-Prot
Match: CATD_CHIHA (Cathepsin D OS=Chionodraco hamatus GN=ctsd PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 8.794e-21
Identity = 42/82 (51.22%), Postives = 59/82 (71.95%), Query Frame = -2
Query:  273 SLPNSMGESIIDCGRIPTMPNVSFTIGDKIFNLFPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFD 518
            + P   GE +++C  +P++P +SFT+G +++ L  EQYILK  +    +C+SGFM  D+P P GPLWILGDVFMG Y+TVFD
Sbjct:  303 AFPLIQGEYMVNCDTVPSLPVISFTVGGQVYTLTGEQYILKVTQAGKTMCLSGFMGLDIPAPAGPLWILGDVFMGQYYTVFD 384          
BLAST of DN621135 vs. ExPASy Swiss-Prot
Match: CATD_CANFA (Cathepsin D OS=Canis familiaris GN=CTSD PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.959e-20
Identity = 42/88 (47.73%), Postives = 61/88 (69.32%), Query Frame = -2
Query:  255 SLPNSMGESIIDCGRIPTMPNVSFTIGDKIFNLFPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDFGKLRI 518
            ++P   GE +I C ++ T+P+V+  +G K++ L  E Y LK  +G   +C+SGFM  D+PPP GPLWILGDVF+G Y+TVFD  + R+
Sbjct:  315 AVPLIQGEYMIPCEKVSTLPDVTLKLGGKLYKLSSEDYTLKVSQGGKTICLSGFMGMDIPPPGGPLWILGDVFIGCYYTVFDRDQNRV 402          
BLAST of DN621135 vs. ExPASy Swiss-Prot
Match: CATD_MOUSE (Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.342e-20
Identity = 42/88 (47.73%), Postives = 60/88 (68.18%), Query Frame = -2
Query:  255 SLPNSMGESIIDCGRIPTMPNVSFTIGDKIFNLFPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDFGKLRI 518
            ++P   GE +I C ++ ++P V   +G K + L P++YILK  +G   +C+SGFM  D+PPP GPLWILGDVF+G Y+TVFD    R+
Sbjct:  315 AVPLIQGEYMIPCEKVSSLPTVYLKLGGKNYELHPDKYILKVSQGGKTICLSGFMGMDIPPPSGPLWILGDVFIGSYYTVFDRDNNRV 402          
The following BLAST results are available for this feature:
BLAST of DN621135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
ASPR_CUCPE9.330e-4771.55Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1[more]
ASPR1_ORYSJ1.068e-4266.38Aspartic proteinase oryzasin-1 OS=Oryza sativa sub... [more]
ASPR_HORVU1.542e-4165.52Phytepsin OS=Hordeum vulgare PE=1 SV=1[more]
CYPR1_CYNCA8.459e-4059.65Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO... [more]
ASPRX_ORYSJ1.443e-3963.79Aspartic proteinase OS=Oryza sativa subsp. japonic... [more]
CATD_CLUHA1.603e-2252.44Cathepsin D OS=Clupea harengus GN=ctsd PE=1 SV=1[more]
ASPP_AEDAE6.733e-2146.81Lysosomal aspartic protease OS=Aedes aegypti GN=AA... [more]
CATD_CHIHA8.794e-2151.22Cathepsin D OS=Chionodraco hamatus GN=ctsd PE=1 SV... [more]
CATD_CANFA1.959e-2047.73Cathepsin D OS=Canis familiaris GN=CTSD PE=2 SV=1[more]
CATD_MOUSE3.342e-2047.73Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06E18_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006E18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621135 ID=DN621135; Name=DN621135; organism=Citrus sinensis; type=EST; length=603bp
TTTTTTTTTTTTTTTTTCAAAAAATTGAAGTACTTTAAACATAGGATGAT
AGGATTTTACATAAGTATATATCACCATATCATCTGGGGGGATGATGATG
ATAGTTATGCATAAAAGCATACTGATCGTTTTACAGTACATGAAAACCAT
AATCTACATTCTACAACCCTCCTCCTCATATGAGCAGGTGATGATCGCTG
CTACTACATAAAAACTTGACAGTAAGTAAATCATTACCCACCCCCACCAA
AGCCAATCCGGAGCTTACCAAAGTCAAAAACAGTGTGATAAACCCCCATG
AATACATCTCCCAAAATCCACAAAGGACCCCTTGGAGGAGGCAGGTCAAA
AGCCATGAACCCACTGATGCAAACTTCTGCAATCCCTTCTCCGGTTTTCA
AAATATACTGCTCTGGAAAAAGGTTGAAAATTTTGTCTCCAATGGTGAAT
GAAACATTTGGCATGGTTGGAATGCGACCACAGTCAATAATTGATTCTCC
CATCGAATTTGGCAGGCTGTCCCAAAGCTCATTTATATAACTGAGTACTT
TCTCCTTTGTTTGCTTTTGTTTTAGCTGATTCTGGACCCAAACCACGGTC
ATT
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