DN621122

Overview
NameDN621122
Unique NameDN621122
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length728
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13691 contig Csv1_Contig13691:327..1054. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621122 vs. ExPASy Swiss-Prot
Match: CHL1_ARATH (Nitrate/chlorate transporter OS=Arabidopsis thaliana GN=CHL1 PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.519e-37
Identity = 79/183 (43.17%), Postives = 120/183 (65.57%), Query Frame = -1
Query:  201 EKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETS-----VQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNK--HWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFVAMKHQYNVQHRVKGDKELEN 728
            ++V + L +K+ +   G+  LQR+G GL F  +AM V+A++E +R  T+       K + +  + L+PQY +VG GEA +Y GQL+FF+RE P+ MK MSTGL LS +++G F SS+LV+IV+K T K   W+  +LNKG+L NFYWL+AVL  LNF++FL  +  + Y  +   +   EL++
Sbjct:  400 DRVAIRLCKKLFNYPHGLRPLQRIGLGLFFGSMAMAVAALVELKRLRTAHAHGPTVKTLPLGFYLLIPQYLIVGIGEALIYTGQLDFFLRECPKGMKGMSTGLLLSTLALGFFFSSVLVTIVEKFTGKAHPWIADDLNKGRLYNFYWLVAVLVALNFLIFLVFSKWYVYKEKRLAEVGIELDD 582          
BLAST of DN621122 vs. ExPASy Swiss-Prot
Match: PTR1_ARATH (Peptide transporter PTR1 OS=Arabidopsis thaliana GN=PTR1 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.058e-36
Identity = 71/172 (41.28%), Postives = 116/172 (67.44%), Query Frame = -1
Query:  243 EKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRE------TSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKH----WLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFVAMKHQY 728
            ++  +PLARK T + +G T LQR+G GL+ S+ AMI + V+E  R +         QK I +S FW +PQY L+G  E F ++GQLEFF  + P+ M+S+ + L L+ +++G ++S++LV++V KIT K+    W+  NLN+G L+ F++LLA L  LNF+V+L+++ +++Y
Sbjct:  391 DQFIIPLARKFTRNERGFTQLQRMGIGLVVSIFAMITAGVLEVVRLDYVKTHNAYDQKQIHMSIFWQIPQYLLIGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVALGNYLSTVLVTVVMKITKKNGKPGWIPDNLNRGHLDYFFYLLATLSFLNFLVYLWISKRYKY 562          
BLAST of DN621122 vs. ExPASy Swiss-Prot
Match: PTR5_ARATH (Peptide transporter PTR5 OS=Arabidopsis thaliana GN=PTR5 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.985e-34
Identity = 74/173 (42.77%), Postives = 110/173 (63.58%), Query Frame = -1
Query:  243 EKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKH-------IQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNK----HWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFVAMKHQY 728
            +K+ VP ARK T   +G T LQR+G GL+ S+ +M+ + ++E  R    VQ H       I ++ FW VPQYFLVG  E F ++GQLEFF  + P+ M+S+ + L L+AI+ G ++S+ LV++V K+T       W+  NLN G L+ F+WLLA L  LNF+V+L++A  + Y
Sbjct:  391 DKLIVPFARKYTGHERGFTQLQRIGIGLVISIFSMVSAGILEVARLNY-VQTHNLYNEETIPMTIFWQVPQYFLVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTAIAFGNYLSTFLVTLVTKVTRSGGRPGWIAKNLNNGHLDYFFWLLAGLSFLNFLVYLWIAKWYTY 562          
BLAST of DN621122 vs. ExPASy Swiss-Prot
Match: PTR3B_ARATH (Peptide transporter PTR3-B OS=Arabidopsis thaliana GN=PTR3-B PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.805e-31
Identity = 70/196 (35.71%), Postives = 122/196 (62.24%), Query Frame = -1
Query:  192 EKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKH--------IQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKH---WLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFVAMKHQYNVQHRVKGDKE------LENFND 728
            ++VFV   RK+T + +G+T LQR+G G+I  ++ MI++++ E+ R + + +          I +S F L+PQY L+G  +AF+ + +LEFF  + PE MKS+ T    +++++G F+SS+L+S V +IT K    W+++NLN+ +L+N+Y   AVL LLNF++FL V   ++Y        + E      ++N+N+
Sbjct:  391 DRVFVKFMRKLTGNPRGITLLQRMGIGMILHILIMIIASITERYRLKVAAEHGLTHQTAVPIPLSIFTLLPQYVLMGLADAFIEIAKLEFFYDQAPESMKSLGTSYTSTSMAVGYFMSSILLSSVSQITKKQGRGWIQNNLNESRLDNYYMFFAVLNLLNFILFLVVIRFYEYRADVTQSANVEQKEPNMVDNYNE 586          
BLAST of DN621122 vs. ExPASy Swiss-Prot
Match: PTR2_ARATH (Peptide transporter PTR2 OS=Arabidopsis thaliana GN=PTR2 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.594e-29
Identity = 64/172 (37.21%), Postives = 104/172 (60.47%), Query Frame = -1
Query:  246 EKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQ-------KHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKH----WLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFVAMKHQ 728
            ++  VPLARK T   +G T +QR+G GL  SV+ M  +A++E  R   +           + IS  W +PQYF++GA E F ++GQLEFF  + P+ M+S+ + L L   ++G ++SS+++++V   T ++    W+  NLN G L+ F+WLLA L L+N  V+ F A +++
Sbjct:  408 DRFIVPLARKFTGVDKGFTEIQRMGIGLFVSVLCMAAAAIVEIIRLHMANDLGLVESGAPVPISVLWQIPQYFILGAAEVFYFIGQLEFFYDQSPDAMRSLCSALALLTNALGNYLSSLILTLVTYFTTRNGQEGWISDNLNSGHLDYFFWLLAGLSLVNMAVYFFSAARYK 579          
BLAST of DN621122 vs. ExPASy Swiss-Prot
Match: PTR3A_ARATH (Peptide transporter PTR3-A OS=Arabidopsis thaliana GN=PTR3-A PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.627e-28
Identity = 66/176 (37.50%), Postives = 111/176 (63.07%), Query Frame = -1
Query:  234 EKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQK--------HIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKH---WLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFVAMKHQYNVQ 728
            ++VFV + RK T + +G+T LQR+G GLIF ++ MIV++V E+ R + +            + ++ F L+PQ+ L+G  ++F+ V +LEFF  + PE MKS+ T    +++++G F+SS L+S V +IT K    W+ +NLN+ +L+ +Y   AVL L+NF++FL V   + Y  +
Sbjct:  391 DRVFVKITRKFTGNPRGITLLQRMGIGLIFHILIMIVASVTERYRLKVAADHGLIHQTGVKLPLTIFALLPQFVLMGMADSFLEVAKLEFFYDQAPESMKSLGTSYSTTSLAIGNFMSSFLLSTVSEITKKRGRGWILNNLNESRLDYYYLFFAVLNLVNFVLFLVVVKFYVYRAE 566          
BLAST of DN621122 vs. ExPASy Swiss-Prot
Match: PTR2X_ARATH (Probable peptide transporter At1g52190 OS=Arabidopsis thaliana GN=At1g52190 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.176e-24
Identity = 62/195 (31.79%), Postives = 109/195 (55.90%), Query Frame = -1
Query:  192 EKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKH--------IQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKH----WLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFVAMKHQYNVQH----RVKGDKELENFND 728
            ++  +PLA KI      ++   R+G GL  S +AM +SA++E  RR+ ++ +         + ISA WLVPQY L G  EA   +GQ EFF  E P+ M S++  LF   +++   ++S++++ V+++T+++    W+  N+NKG  N +YW+LA++  +N + ++  +  +   V      RV G +E E   D
Sbjct:  395 DRAVIPLASKIRGRPFRLSVKLRMGLGLFMSFLAMAISAMVESFRRKKAISQGYANNSNAVVDISAMWLVPQYVLHGLAEALTAIGQTEFFYTEFPKSMSSIAASLFGLGMAVASLLASVVLNAVNELTSRNGKESWVSDNINKGHYNYYYWVLAIMSFINVIYYVICSWSYGPLVDQVRNGRVNGVREEEELID 589          
BLAST of DN621122 vs. ExPASy Swiss-Prot
Match: S15A4_HUMAN (Solute carrier family 15 member 4 OS=Homo sapiens GN=SLC15A4 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.338e-14
Identity = 53/187 (28.34%), Postives = 93/187 (49.73%), Query Frame = -1
Query:  228 VFVPLARKITHSI---QGM--TSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQ------------ISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLRS-----NLNKGKLNNFYWLLAVLGLLNFMVFLFVAMKHQYNVQHR 722
            + +PL  K+   I    G+  +SL+R+  G+ F + +   + ++E +R     +K I             +S +W VPQY L+G  E F  +  LEF     P+ M+S   GLF     +G FV S L+++V  I    W+ S     N+N   LN +++LLA +     ++FL +++K+ ++  H+
Sbjct:  379 LLIPLKDKLVDPILRRHGLLPSSLKRIAVGMFFVMCSAFAAGILESKRLNLVKEKTINQTIGNVVYHAADLSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFVGSGLLALV-SIKAIGWMSSHTDFGNINGCYLNYYFFLLAAIQGATLLLFLIISVKYDHHRDHQ 564          
BLAST of DN621122 vs. ExPASy Swiss-Prot
Match: S15A4_XENLA (Solute carrier family 15 member 4 OS=Xenopus laevis GN=slc15a4 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.083e-14
Identity = 48/181 (26.52%), Postives = 93/181 (51.38%), Query Frame = -1
Query:  246 VFVPLARKITHSI---QGM--TSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQ------------ISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLRS-----NLNKGKLNNFYWLLAVLGLLNFMVFLFVAMKHQ 722
            + +PL  K+       +G+  + L+R+  G+ F + +++ + ++E +R E   +  IQ            ++ +W +PQY L+G  E F  +  LEF     P+ M+S+  GLF     +G FV S L+++V  I    W+ +     N+N   LN +++LLA +     ++FL +++K++
Sbjct:  380 ILIPLKDKLVDPFLKKRGLLPSPLKRIAVGMFFVMCSVLAAGILESERLEIVKRDKIQQQIGNVTYYAANLTVWWQLPQYILIGISEIFASIAGLEFAYSAAPKSMQSVIMGLFFFFSGIGSFVGSGLLALV-SIPQIGWMSNHSDLGNINGCTLNYYFFLLAAVQAATLLLFLIISVKYE 559          
BLAST of DN621122 vs. ExPASy Swiss-Prot
Match: S15A4_BOVIN (Solute carrier family 15 member 4 OS=Bos taurus GN=SLC15A4 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.303e-13
Identity = 51/180 (28.33%), Postives = 89/180 (49.44%), Query Frame = -1
Query:  249 VFVPLARKITHSI---QGM--TSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQ------------ISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLRS-----NLNKGKLNNFYWLLAVLGLLNFMVFLFVAMKH 722
            + +PL  K+   I    G+  +SL+R+  G+ F + +   + ++E +R +   +K I             +  +W VPQY L+G  E F  +  LEF     P+ M+S   GLF     +G FV S L+++V  +    W+ S     N+N   LN +++LLA +     ++FL V++K+
Sbjct:  372 LLIPLKDKLVDPILKRNGLLPSSLKRIAVGMFFVMCSAFAAGILESKRLDLVKEKTINQTIGNVVYYAADLPIWWQVPQYVLIGVSEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFVGSGLLALV-SLKAIGWMSSHTDFGNINGCYLNYYFFLLAAIQGATLLLFLIVSVKY 550          
The following BLAST results are available for this feature:
BLAST of DN621122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
CHL1_ARATH9.519e-3743.17Nitrate/chlorate transporter OS=Arabidopsis thalia... [more]
PTR1_ARATH8.058e-3641.28Peptide transporter PTR1 OS=Arabidopsis thaliana G... [more]
PTR5_ARATH1.985e-3442.77Peptide transporter PTR5 OS=Arabidopsis thaliana G... [more]
PTR3B_ARATH7.805e-3135.71Peptide transporter PTR3-B OS=Arabidopsis thaliana... [more]
PTR2_ARATH5.594e-2937.21Peptide transporter PTR2 OS=Arabidopsis thaliana G... [more]
PTR3A_ARATH1.627e-2837.50Peptide transporter PTR3-A OS=Arabidopsis thaliana... [more]
PTR2X_ARATH3.176e-2431.79Probable peptide transporter At1g52190 OS=Arabidop... [more]
S15A4_HUMAN1.338e-1428.34Solute carrier family 15 member 4 OS=Homo sapiens ... [more]
S15A4_XENLA5.083e-1426.52Solute carrier family 15 member 4 OS=Xenopus laevi... [more]
S15A4_BOVIN4.303e-1328.33Solute carrier family 15 member 4 OS=Bos taurus GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_06E11_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621122 ID=DN621122; Name=DN621122; organism=Citrus sinensis; type=EST; length=728bp
TTTTTTTTTAACACATCACAAGGATCTTTTATTTACCACAATGCTTAATA
GGGCACACAAAAGAATGCTTAAAATTAACTAAATACAACCTGGCAATATA
CTGTTACATATTTAAGCTCAAAAGCAAACACCAACTAGAGCTCCATTTTT
CCCTCAGCAATCCAATTGTTCTCCAAATCTTAAACTTTCCCATCATTGAA
ATTCTCAAGCTCTTTATCTCCCTTAACACGATGCTGCACATTATACTGAT
GCTTCATTGCAACGAAAAGAAACACCATGAAATTCAAAAGTCCTAGCACT
GCAAGTAGCCAATAGAAGTTGTTTAACTTCCCTTTATTCAAATTGCTTCT
CAGCCAGTGCTTATTGGTTATTTTGTCAACAATAGACACCAACATGCTGC
TAACAAACATCCCCATTGAAATGGCACTTAGAAACAGCCCTGTGCTCATT
GATTTCATCCTCTCTGGCCCTTCCCTAATGAAGAACTCAAGTTGTCCCAC
ATAAACAAAAGCTTCGCCTGCGCCGACAAGAAAGTACTGAGGGACTAGCC
AGAAAGCACTTATTTGGATGTGCTTTTGAACTGAAGTTTCCCTCCTTTGC
TGCTCAATAACGGCAGAAACAATCATAGCAATCACTGAAAAAATTAGTCC
AGTGCCAACCCTCTGAAGGCTTGTCATTCCTTGGATGGAGTGTGTGATTT
TTCGAGCCAGGGGAACAAACACTTTTTC
back to top